RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 UQCRQO14949 82 aa3.79□□□□□ -1.8
SNX1-207ENST00000559401 SMIM20Q8N5G0 67 aa3.78□□□□□ -1.8
SNX1-207ENST00000559401 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
SNX1-207ENST00000559401 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
SNX1-207ENST00000559401 ANAPC13Q9BS18 74 aa3.77□□□□□ -1.81
SNX1-207ENST00000559401 PCP4P48539 62 aa3.76□□□□□ -1.81
SNX1-207ENST00000559401 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
SNX1-207ENST00000559401 TRAV7A0A075B6U4 112 aa3.74□□□□□ -1.81
SNX1-207ENST00000559401 SERP2Q8N6R1 65 aa3.74□□□□□ -1.81
SNX1-207ENST00000559401 LINC00208Q96KT6 92 aa3.74□□□□□ -1.81
SNX1-207ENST00000559401 MP68P56378 58 aa3.73□□□□□ -1.81
SNX1-207ENST00000559401 COX7CP15954 63 aa3.72□□□□□ -1.81
SNX1-207ENST00000559401 KLKP1Q107X0 134 aa3.71□□□□□ -1.82
SNX1-207ENST00000559401 OCR1Q9BZK8 76 aa3.71□□□□□ -1.82
SNX1-207ENST00000559401 NDUFC1O43677 76 aa3.7□□□□□ -1.82
SNX1-207ENST00000559401 Q5VV11 94 aa3.7□□□□□ -1.82
SNX1-207ENST00000559401 MACF1Q9UPN3 7388 aaKnown RBP3.7□□□□□ -1.82
SNX1-207ENST00000559401 A8MUN3 132 aa3.68□□□□□ -1.82
SNX1-207ENST00000559401 CCDC179H3BU77 68 aa3.67□□□□□ -1.82
SNX1-207ENST00000559401 SPRR2GQ9BYE4 73 aa3.67□□□□□ -1.82
SNX1-207ENST00000559401 A6NN06 94 aa3.65□□□□□ -1.83
SNX1-207ENST00000559401 H3BPC8 53 aa3.65□□□□□ -1.83
SNX1-207ENST00000559401 MT1BP07438 61 aa3.65□□□□□ -1.83
SNX1-207ENST00000559401 C20orf197Q8N268 126 aa3.65□□□□□ -1.83
SNX1-207ENST00000559401 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
SNX1-207ENST00000559401 CRIPTQ9P021 101 aa3.64□□□□□ -1.83
SNX1-207ENST00000559401 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
SNX1-207ENST00000559401 ADM2Q7Z4H4 148 aa3.63□□□□□ -1.83
SNX1-207ENST00000559401 H0YAA0 97 aa3.62□□□□□ -1.83
SNX1-207ENST00000559401 SNURFQ9Y675 71 aa3.62□□□□□ -1.83
SNX1-207ENST00000559401 DMAC1Q96GE9 116 aa3.59□□□□□ -1.83
SNX1-207ENST00000559401 H7BZZ5 65 aa3.57□□□□□ -1.84
SNX1-207ENST00000559401 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
SNX1-207ENST00000559401 CYSTM1Q9H1C7 97 aa3.57□□□□□ -1.84
SNX1-207ENST00000559401 TMEM258P61165 79 aa3.56□□□□□ -1.84
SNX1-207ENST00000559401 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
SNX1-207ENST00000559401 R4GN34 69 aa3.55□□□□□ -1.84
SNX1-207ENST00000559401 P0C880 135 aa3.53□□□□□ -1.84
SNX1-207ENST00000559401 ACYP2P14621 99 aa3.53□□□□□ -1.84
SNX1-207ENST00000559401 ATP5EP56381 51 aaPredicted RBP3.53□□□□□ -1.84
SNX1-207ENST00000559401 SPANXA2-OT1Q8N9U9 137 aa3.53□□□□□ -1.84
SNX1-207ENST00000559401 M0QZ58 72 aa3.52□□□□□ -1.85
SNX1-207ENST00000559401 CHKB-CPT1BH3BT56 60 aa3.51□□□□□ -1.85
SNX1-207ENST00000559401 PLAC4Q8WY50 150 aa3.51□□□□□ -1.85
SNX1-207ENST00000559401 SPTSSBQ8NFR3 76 aa3.5□□□□□ -1.85
SNX1-207ENST00000559401 LINC01554Q52M75 96 aa3.49□□□□□ -1.85
SNX1-207ENST00000559401 PRO2289Q9P1D8 64 aa3.48□□□□□ -1.85
SNX1-207ENST00000559401 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
SNX1-207ENST00000559401 SERP1Q9Y6X1 66 aa3.46□□□□□ -1.86
SNX1-207ENST00000559401 MT1XP80297 61 aa3.43□□□□□ -1.86
SNX1-207ENST00000559401 COA5Q86WW8 74 aa3.4□□□□□ -1.87
SNX1-207ENST00000559401 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
SNX1-207ENST00000559401 NEBP20929 6669 aa3.38□□□□□ -1.87
SNX1-207ENST00000559401 SMIM26A0A096LP01 95 aa3.37□□□□□ -1.87
SNX1-207ENST00000559401 MUC12Q9UKN1 5478 aa3.36□□□□□ -1.87
SNX1-207ENST00000559401 KRTAP8-1Q8IUC2 63 aa3.35□□□□□ -1.87
SNX1-207ENST00000559401 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
SNX1-207ENST00000559401 KMT2DO14686 5537 aa3.33□□□□□ -1.88
SNX1-207ENST00000559401 KRTAP12-2P59991 146 aa3.33□□□□□ -1.88
SNX1-207ENST00000559401 V9GYY9 64 aa3.33□□□□□ -1.88
SNX1-207ENST00000559401 SEC61GP60059 68 aa3.31□□□□□ -1.88
SNX1-207ENST00000559401 Q1T7F1 81 aa3.31□□□□□ -1.88
SNX1-207ENST00000559401 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
SNX1-207ENST00000559401 SPRR2EP22531 72 aa3.3□□□□□ -1.88
SNX1-207ENST00000559401 SPRR2BP35325 72 aa3.3□□□□□ -1.88
SNX1-207ENST00000559401 SPRR2AP35326 72 aa3.3□□□□□ -1.88
SNX1-207ENST00000559401 KRTAP13-4Q3LI77 160 aa3.3□□□□□ -1.88
SNX1-207ENST00000559401 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
SNX1-207ENST00000559401 CAMK2N1Q7Z7J9 78 aa3.29□□□□□ -1.88
SNX1-207ENST00000559401 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
SNX1-207ENST00000559401 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
SNX1-207ENST00000559401 KRTAP4-8Q9BYQ9 185 aa3.28□□□□□ -1.88
SNX1-207ENST00000559401 LINC01558Q9Y6Z2 57 aa3.28□□□□□ -1.88
SNX1-207ENST00000559401 SVIPQ8NHG7 77 aa3.27□□□□□ -1.89
SNX1-207ENST00000559401 A0A0D9SG42 100 aa3.26□□□□□ -1.89
SNX1-207ENST00000559401 KRTAP10-12P60413 245 aa3.25□□□□□ -1.89
SNX1-207ENST00000559401 PRR15LQ9BU68 103 aa3.25□□□□□ -1.89
SNX1-207ENST00000559401 A0A1B0GU33 70 aa3.23□□□□□ -1.89
SNX1-207ENST00000559401 A0A1B0GU69 56 aa3.23□□□□□ -1.89
SNX1-207ENST00000559401 SPATA8Q6RVD6 105 aa3.23□□□□□ -1.89
SNX1-207ENST00000559401 H3BS24 57 aa3.22□□□□□ -1.89
SNX1-207ENST00000559401 PSPHP1O15172 72 aa3.22□□□□□ -1.89
SNX1-207ENST00000559401 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
SNX1-207ENST00000559401 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
SNX1-207ENST00000559401 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
SNX1-207ENST00000559401 SPINT4Q6UDR6 99 aa3.21□□□□□ -1.9
SNX1-207ENST00000559401 SPRR2DP22532 72 aa3.19□□□□□ -1.9
SNX1-207ENST00000559401 UQCR11O14957 56 aa3.15□□□□□ -1.91
SNX1-207ENST00000559401 A6NED7 52 aa3.14□□□□□ -1.91
SNX1-207ENST00000559401 KRTAP12-1P59990 96 aa3.14□□□□□ -1.91
SNX1-207ENST00000559401 A8MU10 97 aa3.11□□□□□ -1.91
SNX1-207ENST00000559401 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
SNX1-207ENST00000559401 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
SNX1-207ENST00000559401 MIR22HGQ0VDD5 57 aa3.1□□□□□ -1.91
SNX1-207ENST00000559401 LCE3BQ5TA77 95 aa3.09□□□□□ -1.91
SNX1-207ENST00000559401 CDC42SE1Q9NRR8 79 aa3.09□□□□□ -1.91
SNX1-207ENST00000559401 BRK1Q8WUW1 75 aa3.08□□□□□ -1.92
SNX1-207ENST00000559401 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
SNX1-207ENST00000559401 MT1EP04732 61 aa3.04□□□□□ -1.92
SNX1-207ENST00000559401 PRO0628Q9UI54 55 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms