RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 LOC101927531A0A1B0GV80 90 aa2.1□□□□□ -2.07
SNX1-205ENST00000559339 ATOX1O00244 68 aa2.1□□□□□ -2.07
SNX1-205ENST00000559339 MT1FP04733 61 aa2.1□□□□□ -2.07
SNX1-205ENST00000559339 LINC00643Q86TS7 51 aa2.1□□□□□ -2.07
SNX1-205ENST00000559339 A0A1B0GV90 55 aa2.09□□□□□ -2.07
SNX1-205ENST00000559339 UQCRQO14949 82 aa2.09□□□□□ -2.07
SNX1-205ENST00000559339 C1orf64Q8NEQ6 169 aa2.09□□□□□ -2.07
SNX1-205ENST00000559339 KRTAP4-2Q9BYR5 136 aa2.09□□□□□ -2.07
SNX1-205ENST00000559339 C5orf47Q569G3 176 aa2.08□□□□□ -2.08
SNX1-205ENST00000559339 CSAG1Q6PB30 78 aa2.08□□□□□ -2.08
SNX1-205ENST00000559339 CYP4F30PQ9H0H9 118 aa2.08□□□□□ -2.08
SNX1-205ENST00000559339 S4R3F8 94 aa2.08□□□□□ -2.08
SNX1-205ENST00000559339 FAM236AA0A1B0GUQ0 79 aa2.07□□□□□ -2.08
SNX1-205ENST00000559339 FAM236BA0A1B0GV22 79 aa2.07□□□□□ -2.08
SNX1-205ENST00000559339 H0Y9P7 68 aa2.07□□□□□ -2.08
SNX1-205ENST00000559339 SCGB1A1P11684 91 aa2.07□□□□□ -2.08
SNX1-205ENST00000559339 MP68P56378 58 aa2.07□□□□□ -2.08
SNX1-205ENST00000559339 A0A087WVE0 104 aa2.06□□□□□ -2.08
SNX1-205ENST00000559339 LCA10Q71F78 164 aa2.05□□□□□ -2.08
SNX1-205ENST00000559339 USH2AO75445 5202 aa2.05□□□□□ -2.08
SNX1-205ENST00000559339 A8MUN3 132 aa2.04□□□□□ -2.08
SNX1-205ENST00000559339 LINC00208Q96KT6 92 aa2.04□□□□□ -2.08
SNX1-205ENST00000559339 H3BPC8 53 aa2.03□□□□□ -2.08
SNX1-205ENST00000559339 K7ERU9 68 aa2.03□□□□□ -2.08
SNX1-205ENST00000559339 NDUFC1O43677 76 aa2.03□□□□□ -2.08
SNX1-205ENST00000559339 OCR1Q9BZK8 76 aa2.03□□□□□ -2.08
SNX1-205ENST00000559339 A0A0A0MQY5 61 aa2.02□□□□□ -2.09
SNX1-205ENST00000559339 IMUPQ9GZP8 106 aa2.02□□□□□ -2.09
SNX1-205ENST00000559339 KLKP1Q107X0 134 aa2□□□□□ -2.09
SNX1-205ENST00000559339 SMIM20Q8N5G0 67 aa2□□□□□ -2.09
SNX1-205ENST00000559339 CRIPTQ9P021 101 aa2□□□□□ -2.09
SNX1-205ENST00000559339 H0YAA0 97 aa1.99□□□□□ -2.09
SNX1-205ENST00000559339 KRTAP19-6Q3LI70 58 aa1.99□□□□□ -2.09
SNX1-205ENST00000559339 Q5VV11 94 aa1.98□□□□□ -2.09
SNX1-205ENST00000559339 MT-ATP8P03928 68 aa1.97□□□□□ -2.09
SNX1-205ENST00000559339 C20orf197Q8N268 126 aa1.97□□□□□ -2.09
SNX1-205ENST00000559339 SPRR2GQ9BYE4 73 aa1.97□□□□□ -2.09
SNX1-205ENST00000559339 FCGBPQ9Y6R7 5405 aaPredicted RBP1.97□□□□□ -2.09
SNX1-205ENST00000559339 SSPOA2VEC9 5147 aa1.96□□□□□ -2.1
SNX1-205ENST00000559339 TRAV7A0A075B6U4 112 aa1.96□□□□□ -2.1
SNX1-205ENST00000559339 ADM2Q7Z4H4 148 aa1.96□□□□□ -2.1
SNX1-205ENST00000559339 DMAC1Q96GE9 116 aa1.96□□□□□ -2.1
SNX1-205ENST00000559339 SYNE2Q8WXH0 6885 aaKnown RBP1.96□□□□□ -2.1
SNX1-205ENST00000559339 A6NN06 94 aa1.95□□□□□ -2.1
SNX1-205ENST00000559339 ACYP2P14621 99 aa1.95□□□□□ -2.1
SNX1-205ENST00000559339 SPTSSBQ8NFR3 76 aa1.95□□□□□ -2.1
SNX1-205ENST00000559339 KRTAP19-8Q3LI54 63 aa1.94□□□□□ -2.1
SNX1-205ENST00000559339 R4GN34 69 aa1.94□□□□□ -2.1
SNX1-205ENST00000559339 MACF1Q9UPN3 7388 aaKnown RBP1.93□□□□□ -2.1
SNX1-205ENST00000559339 CHKB-CPT1BH3BT56 60 aa1.93□□□□□ -2.1
SNX1-205ENST00000559339 MT1BP07438 61 aa1.92□□□□□ -2.1
SNX1-205ENST00000559339 SERP2Q8N6R1 65 aa1.92□□□□□ -2.1
SNX1-205ENST00000559339 PLAC4Q8WY50 150 aa1.91□□□□□ -2.1
SNX1-205ENST00000559339 PRO2289Q9P1D8 64 aa1.91□□□□□ -2.1
SNX1-205ENST00000559339 SNURFQ9Y675 71 aa1.91□□□□□ -2.1
SNX1-205ENST00000559339 M0QZ58 72 aa1.9□□□□□ -2.11
SNX1-205ENST00000559339 SPANXA2-OT1Q8N9U9 137 aa1.9□□□□□ -2.11
SNX1-205ENST00000559339 P0C880 135 aa1.89□□□□□ -2.11
SNX1-205ENST00000559339 KRTAP10-5P60370 271 aa1.89□□□□□ -2.11
SNX1-205ENST00000559339 LINC01554Q52M75 96 aa1.88□□□□□ -2.11
SNX1-205ENST00000559339 KRTAP6-3Q3LI67 103 aa1.87□□□□□ -2.11
SNX1-205ENST00000559339 COX7CP15954 63 aa1.86□□□□□ -2.11
SNX1-205ENST00000559339 SEC61GP60059 68 aa1.86□□□□□ -2.11
SNX1-205ENST00000559339 SERP1Q9Y6X1 66 aa1.84□□□□□ -2.11
SNX1-205ENST00000559339 COA5Q86WW8 74 aa1.83□□□□□ -2.12
SNX1-205ENST00000559339 MT1XP80297 61 aa1.82□□□□□ -2.12
SNX1-205ENST00000559339 ANAPC13Q9BS18 74 aa1.82□□□□□ -2.12
SNX1-205ENST00000559339 H7BZZ5 65 aa1.81□□□□□ -2.12
SNX1-205ENST00000559339 LCE1AQ5T7P2 110 aa1.81□□□□□ -2.12
SNX1-205ENST00000559339 KRTAP5-9P26371 169 aa1.8□□□□□ -2.12
SNX1-205ENST00000559339 KRTAP12-2P59991 146 aa1.79□□□□□ -2.12
SNX1-205ENST00000559339 CAMK2N1Q7Z7J9 78 aa1.79□□□□□ -2.12
SNX1-205ENST00000559339 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
SNX1-205ENST00000559339 A0A1B0GU33 70 aa1.78□□□□□ -2.12
SNX1-205ENST00000559339 KRTAP5-3Q6L8H2 238 aa1.78□□□□□ -2.12
SNX1-205ENST00000559339 CYSTM1Q9H1C7 97 aa1.78□□□□□ -2.12
SNX1-205ENST00000559339 NEBP20929 6669 aa1.78□□□□□ -2.12
SNX1-205ENST00000559339 A0A1B0GU69 56 aa1.77□□□□□ -2.13
SNX1-205ENST00000559339 MT3P25713 68 aa1.77□□□□□ -2.13
SNX1-205ENST00000559339 ATP5EP56381 51 aaPredicted RBP1.77□□□□□ -2.13
SNX1-205ENST00000559339 SPRR2FQ96RM1 72 aa1.77□□□□□ -2.13
SNX1-205ENST00000559339 MUC12Q9UKN1 5478 aa1.77□□□□□ -2.13
SNX1-205ENST00000559339 KMT2DO14686 5537 aa1.76□□□□□ -2.13
SNX1-205ENST00000559339 A0A0D9SG42 100 aa1.76□□□□□ -2.13
SNX1-205ENST00000559339 KRTAP13-4Q3LI77 160 aa1.76□□□□□ -2.13
SNX1-205ENST00000559339 CCDC179H3BU77 68 aa1.75□□□□□ -2.13
SNX1-205ENST00000559339 SPATA8Q6RVD6 105 aa1.75□□□□□ -2.13
SNX1-205ENST00000559339 SPINT4Q6UDR6 99 aa1.75□□□□□ -2.13
SNX1-205ENST00000559339 PRR15LQ9BU68 103 aa1.75□□□□□ -2.13
SNX1-205ENST00000559339 SMIM26A0A096LP01 95 aa1.74□□□□□ -2.13
SNX1-205ENST00000559339 SPRR2EP22531 72 aa1.74□□□□□ -2.13
SNX1-205ENST00000559339 SPRR2BP35325 72 aa1.74□□□□□ -2.13
SNX1-205ENST00000559339 SPRR2AP35326 72 aa1.74□□□□□ -2.13
SNX1-205ENST00000559339 KRTAP10-7P60409 375 aaPredicted RBP1.74□□□□□ -2.13
SNX1-205ENST00000559339 KRTAP10-12P60413 245 aa1.74□□□□□ -2.13
SNX1-205ENST00000559339 MDN1Q9NU22 5596 aa1.74□□□□□ -2.13
SNX1-205ENST00000559339 KRTAP20-1Q3LI63 56 aa1.73□□□□□ -2.13
SNX1-205ENST00000559339 TMEM258P61165 79 aa1.72□□□□□ -2.13
SNX1-205ENST00000559339 KRTAP2-3P0C7H8 128 aa1.7□□□□□ -2.14
SNX1-205ENST00000559339 KRTAP12-1P59990 96 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 230 ms