RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 J3KT08 172 aa2.04□□□□□ -2.08
SPG11-211ENST00000558561 NDUFB1O75438 58 aa2.04□□□□□ -2.08
SPG11-211ENST00000558561 FAM236CP0DP71 79 aa2.04□□□□□ -2.08
SPG11-211ENST00000558561 PDE6GP18545 87 aa2.04□□□□□ -2.08
SPG11-211ENST00000558561 COL5A1-AS1Q5SY13 56 aa2.04□□□□□ -2.08
SPG11-211ENST00000558561 KRTAP5-2Q701N4 177 aa2.04□□□□□ -2.08
SPG11-211ENST00000558561 MRPL34Q9BQ48 92 aaKnown RBP2.04□□□□□ -2.08
SPG11-211ENST00000558561 hDV103S1A0JD37 113 aa2.03□□□□□ -2.08
SPG11-211ENST00000558561 ETDBQ3ZM63 59 aa2.03□□□□□ -2.08
SPG11-211ENST00000558561 TMEM254Q8TBM7 123 aa2.03□□□□□ -2.08
SPG11-211ENST00000558561 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
SPG11-211ENST00000558561 USH2AO75445 5202 aa2.02□□□□□ -2.09
SPG11-211ENST00000558561 A0A1B0GW54 56 aa2.02□□□□□ -2.09
SPG11-211ENST00000558561 NDUFS5O43920 106 aa2.02□□□□□ -2.09
SPG11-211ENST00000558561 LYRM7Q5U5X0 104 aa2.02□□□□□ -2.09
SPG11-211ENST00000558561 SSPOA2VEC9 5147 aa2.01□□□□□ -2.09
SPG11-211ENST00000558561 HCG22E2RYF7 251 aa2.01□□□□□ -2.09
SPG11-211ENST00000558561 KRTAP10-10P60014 251 aa2.01□□□□□ -2.09
SPG11-211ENST00000558561 RBM12B-AS1Q9P1G2 102 aa2.01□□□□□ -2.09
SPG11-211ENST00000558561 C4orf26Q17RF5 130 aa2□□□□□ -2.09
SPG11-211ENST00000558561 CASC2Q6XLA1 102 aa2□□□□□ -2.09
SPG11-211ENST00000558561 A0A087WVE0 104 aa1.99□□□□□ -2.09
SPG11-211ENST00000558561 A0A1B0GV90 55 aa1.99□□□□□ -2.09
SPG11-211ENST00000558561 KRTAP5-5Q701N2 237 aaPredicted RBP1.99□□□□□ -2.09
SPG11-211ENST00000558561 F8W1H4 67 aa1.98□□□□□ -2.09
SPG11-211ENST00000558561 CAMK2N1Q7Z7J9 78 aa1.98□□□□□ -2.09
SPG11-211ENST00000558561 H1FX-AS1Q4G0G2 97 aa1.97□□□□□ -2.09
SPG11-211ENST00000558561 GTF2H5Q6ZYL4 71 aa1.97□□□□□ -2.09
SPG11-211ENST00000558561 UBL5Q9BZL1 73 aa1.96□□□□□ -2.1
SPG11-211ENST00000558561 C5orf47Q569G3 176 aa1.94□□□□□ -2.1
SPG11-211ENST00000558561 C7orf65Q6ZTY9 151 aa1.94□□□□□ -2.1
SPG11-211ENST00000558561 C1orf64Q8NEQ6 169 aa1.94□□□□□ -2.1
SPG11-211ENST00000558561 FCGBPQ9Y6R7 5405 aaPredicted RBP1.93□□□□□ -2.1
SPG11-211ENST00000558561 CYP4F30PQ9H0H9 118 aa1.93□□□□□ -2.1
SPG11-211ENST00000558561 PP632Q6XCG6 107 aa1.92□□□□□ -2.1
SPG11-211ENST00000558561 LCA10Q71F78 164 aa1.92□□□□□ -2.1
SPG11-211ENST00000558561 SPRR5A0A1B0GTR4 108 aa1.91□□□□□ -2.1
SPG11-211ENST00000558561 HIST1H4AP62805 103 aaKnown RBP1.91□□□□□ -2.1
SPG11-211ENST00000558561 KLKP1Q107X0 134 aa1.91□□□□□ -2.1
SPG11-211ENST00000558561 MT1BP07438 61 aa1.9□□□□□ -2.11
SPG11-211ENST00000558561 SEC61GP60059 68 aa1.9□□□□□ -2.11
SPG11-211ENST00000558561 KRTAP19-6Q3LI70 58 aa1.9□□□□□ -2.11
SPG11-211ENST00000558561 TP53AIP1Q9HCN2 124 aa1.89□□□□□ -2.11
SPG11-211ENST00000558561 S4R3F8 94 aa1.89□□□□□ -2.11
SPG11-211ENST00000558561 H0Y9P7 68 aa1.88□□□□□ -2.11
SPG11-211ENST00000558561 ACYP1P07311 99 aa1.88□□□□□ -2.11
SPG11-211ENST00000558561 LINC00643Q86TS7 51 aa1.88□□□□□ -2.11
SPG11-211ENST00000558561 TRAV22A0A0B4J277 110 aa1.87□□□□□ -2.11
SPG11-211ENST00000558561 FAM240AA0A1B0GVK7 77 aa1.87□□□□□ -2.11
SPG11-211ENST00000558561 CSAG1Q6PB30 78 aa1.87□□□□□ -2.11
SPG11-211ENST00000558561 LINC00208Q96KT6 92 aa1.87□□□□□ -2.11
SPG11-211ENST00000558561 MACF1Q9UPN3 7388 aaKnown RBP1.87□□□□□ -2.11
SPG11-211ENST00000558561 SYNE2Q8WXH0 6885 aaKnown RBP1.86□□□□□ -2.11
SPG11-211ENST00000558561 UQCRQO14949 82 aa1.86□□□□□ -2.11
SPG11-211ENST00000558561 KRTAP19-8Q3LI54 63 aa1.86□□□□□ -2.11
SPG11-211ENST00000558561 FAM236AA0A1B0GUQ0 79 aa1.85□□□□□ -2.11
SPG11-211ENST00000558561 FAM236BA0A1B0GV22 79 aa1.85□□□□□ -2.11
SPG11-211ENST00000558561 MT-ATP8P03928 68 aa1.85□□□□□ -2.11
SPG11-211ENST00000558561 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
SPG11-211ENST00000558561 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
SPG11-211ENST00000558561 SPRR2GQ9BYE4 73 aa1.85□□□□□ -2.11
SPG11-211ENST00000558561 LOC101927531A0A1B0GV80 90 aa1.84□□□□□ -2.11
SPG11-211ENST00000558561 P0C880 135 aa1.83□□□□□ -2.12
SPG11-211ENST00000558561 ATP5EP2Q5VTU8 51 aa1.83□□□□□ -2.12
SPG11-211ENST00000558561 ADM2Q7Z4H4 148 aa1.82□□□□□ -2.12
SPG11-211ENST00000558561 Q5VV11 94 aa1.81□□□□□ -2.12
SPG11-211ENST00000558561 A6NN06 94 aa1.8□□□□□ -2.12
SPG11-211ENST00000558561 ATOX1O00244 68 aa1.79□□□□□ -2.12
SPG11-211ENST00000558561 NDUFC1O43677 76 aa1.79□□□□□ -2.12
SPG11-211ENST00000558561 SCGB1A1P11684 91 aa1.79□□□□□ -2.12
SPG11-211ENST00000558561 MP68P56378 58 aa1.79□□□□□ -2.12
SPG11-211ENST00000558561 KRTAP6-3Q3LI67 103 aa1.79□□□□□ -2.12
SPG11-211ENST00000558561 MT1XP80297 61 aa1.78□□□□□ -2.12
SPG11-211ENST00000558561 IMUPQ9GZP8 106 aa1.78□□□□□ -2.12
SPG11-211ENST00000558561 SNURFQ9Y675 71 aa1.78□□□□□ -2.12
SPG11-211ENST00000558561 J3QR89 54 aa1.77□□□□□ -2.13
SPG11-211ENST00000558561 DMAC1Q96GE9 116 aa1.77□□□□□ -2.13
SPG11-211ENST00000558561 TRAV7A0A075B6U4 112 aa1.76□□□□□ -2.13
SPG11-211ENST00000558561 H0YAA0 97 aa1.76□□□□□ -2.13
SPG11-211ENST00000558561 A8MUN3 132 aa1.75□□□□□ -2.13
SPG11-211ENST00000558561 KMT2DO14686 5537 aa1.75□□□□□ -2.13
SPG11-211ENST00000558561 H3BPC8 53 aa1.74□□□□□ -2.13
SPG11-211ENST00000558561 K7ERU9 68 aa1.74□□□□□ -2.13
SPG11-211ENST00000558561 LINC01554Q52M75 96 aa1.74□□□□□ -2.13
SPG11-211ENST00000558561 CYSTM1Q9H1C7 97 aa1.74□□□□□ -2.13
SPG11-211ENST00000558561 CRIPTQ9P021 101 aa1.74□□□□□ -2.13
SPG11-211ENST00000558561 M0QZ58 72 aa1.73□□□□□ -2.13
SPG11-211ENST00000558561 KRTAP13-4Q3LI77 160 aa1.73□□□□□ -2.13
SPG11-211ENST00000558561 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
SPG11-211ENST00000558561 ACYP2P14621 99 aa1.72□□□□□ -2.13
SPG11-211ENST00000558561 C20orf197Q8N268 126 aa1.72□□□□□ -2.13
SPG11-211ENST00000558561 NEBP20929 6669 aa1.71□□□□□ -2.14
SPG11-211ENST00000558561 PLAC4Q8WY50 150 aa1.71□□□□□ -2.14
SPG11-211ENST00000558561 R4GN34 69 aa1.71□□□□□ -2.14
SPG11-211ENST00000558561 MUC12Q9UKN1 5478 aa1.71□□□□□ -2.14
SPG11-211ENST00000558561 SERP2Q8N6R1 65 aa1.7□□□□□ -2.14
SPG11-211ENST00000558561 SMIM20Q8N5G0 67 aa1.68□□□□□ -2.14
SPG11-211ENST00000558561 SPRR2FQ96RM1 72 aa1.68□□□□□ -2.14
SPG11-211ENST00000558561 CHKB-CPT1BH3BT56 60 aa1.66□□□□□ -2.14
SPG11-211ENST00000558561 COX7CP15954 63 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms