RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 COX6B2Q6YFQ2 88 aa5.73□□□□□ -1.49
RORA-207ENST00000558234 KRTAP3-3Q9BYR6 98 aa5.73□□□□□ -1.49
RORA-207ENST00000558234 C4orf26Q17RF5 130 aa5.73□□□□□ -1.49
RORA-207ENST00000558234 ACYP2P14621 99 aa5.7□□□□□ -1.5
RORA-207ENST00000558234 Q1T7F1 81 aa5.68□□□□□ -1.5
RORA-207ENST00000558234 SMIM26A0A096LP01 95 aa5.66□□□□□ -1.5
RORA-207ENST00000558234 LORP23490 312 aaPredicted RBP5.63□□□□□ -1.51
RORA-207ENST00000558234 LINC01558Q9Y6Z2 57 aa5.59□□□□□ -1.51
RORA-207ENST00000558234 LCA10Q71F78 164 aa5.59□□□□□ -1.51
RORA-207ENST00000558234 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
RORA-207ENST00000558234 H1FX-AS1Q4G0G2 97 aa5.58□□□□□ -1.52
RORA-207ENST00000558234 KRTAP9-8Q9BYQ0 159 aa5.56□□□□□ -1.52
RORA-207ENST00000558234 RBM12B-AS1Q9P1G2 102 aa5.56□□□□□ -1.52
RORA-207ENST00000558234 KRTAP3-2Q9BYR7 98 aa5.52□□□□□ -1.53
RORA-207ENST00000558234 Q5VV11 94 aa5.51□□□□□ -1.53
RORA-207ENST00000558234 S4R3F8 94 aa5.49□□□□□ -1.53
RORA-207ENST00000558234 V9GYY9 64 aa5.48□□□□□ -1.53
RORA-207ENST00000558234 MT2AP02795 61 aa5.45□□□□□ -1.54
RORA-207ENST00000558234 H0YAA0 97 aa5.44□□□□□ -1.54
RORA-207ENST00000558234 LCE2DQ5TA82 110 aaPredicted RBP5.44□□□□□ -1.54
RORA-207ENST00000558234 CHKB-CPT1BH3BT56 60 aa5.43□□□□□ -1.54
RORA-207ENST00000558234 MT1FP04733 61 aa5.41□□□□□ -1.54
RORA-207ENST00000558234 SPTSSBQ8NFR3 76 aa5.39□□□□□ -1.55
RORA-207ENST00000558234 PSPHP1O15172 72 aa5.38□□□□□ -1.55
RORA-207ENST00000558234 KRTAP9-3Q9BYQ3 159 aa5.37□□□□□ -1.55
RORA-207ENST00000558234 PRR15LQ9BU68 103 aa5.36□□□□□ -1.55
RORA-207ENST00000558234 A0A1B0GU69 56 aa5.33□□□□□ -1.56
RORA-207ENST00000558234 P0C880 135 aa5.31□□□□□ -1.56
RORA-207ENST00000558234 CSAG1Q6PB30 78 aa5.31□□□□□ -1.56
RORA-207ENST00000558234 KRTAP13-4Q3LI77 160 aa5.3□□□□□ -1.56
RORA-207ENST00000558234 USH2AO75445 5202 aa5.3□□□□□ -1.56
RORA-207ENST00000558234 A8MU10 97 aa5.3□□□□□ -1.56
RORA-207ENST00000558234 M0R2T5 61 aa5.29□□□□□ -1.56
RORA-207ENST00000558234 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
RORA-207ENST00000558234 KRTAP9-2Q9BYQ4 174 aa5.28□□□□□ -1.56
RORA-207ENST00000558234 LCE2BO14633 110 aa5.26□□□□□ -1.57
RORA-207ENST00000558234 ADM2Q7Z4H4 148 aa5.24□□□□□ -1.57
RORA-207ENST00000558234 KRTAP19-1Q8IUB9 90 aa5.24□□□□□ -1.57
RORA-207ENST00000558234 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
RORA-207ENST00000558234 SSPOA2VEC9 5147 aa5.22□□□□□ -1.57
RORA-207ENST00000558234 SPRR2GQ9BYE4 73 aa5.21□□□□□ -1.57
RORA-207ENST00000558234 A0A1B0GU33 70 aa5.21□□□□□ -1.58
RORA-207ENST00000558234 UQCR11O14957 56 aa5.19□□□□□ -1.58
RORA-207ENST00000558234 KRTAP10-10P60014 251 aa5.16□□□□□ -1.58
RORA-207ENST00000558234 SEC61GP60059 68 aa5.16□□□□□ -1.58
RORA-207ENST00000558234 KRTAP19-8Q3LI54 63 aa5.16□□□□□ -1.58
RORA-207ENST00000558234 A6NED7 52 aa5.15□□□□□ -1.59
RORA-207ENST00000558234 MIR22HGQ0VDD5 57 aa5.14□□□□□ -1.59
RORA-207ENST00000558234 PRO0628Q9UI54 55 aa5.13□□□□□ -1.59
RORA-207ENST00000558234 M0QZ58 72 aa5.12□□□□□ -1.59
RORA-207ENST00000558234 CRIPTQ9P021 101 aa5.12□□□□□ -1.59
RORA-207ENST00000558234 BRK1Q8WUW1 75 aa5.1□□□□□ -1.59
RORA-207ENST00000558234 MT1BP07438 61 aa5.1□□□□□ -1.59
RORA-207ENST00000558234 KRTAP12-1P59990 96 aa5.06□□□□□ -1.6
RORA-207ENST00000558234 A6NN06 94 aa5.05□□□□□ -1.6
RORA-207ENST00000558234 KRTAP12-2P59991 146 aa5.04□□□□□ -1.6
RORA-207ENST00000558234 KRTAP19-6Q3LI70 58 aa5.04□□□□□ -1.6
RORA-207ENST00000558234 CRCT1Q9UGL9 99 aa5.01□□□□□ -1.61
RORA-207ENST00000558234 KRTAP9-6A0A140TA67 174 aa4.98□□□□□ -1.61
RORA-207ENST00000558234 FCGBPQ9Y6R7 5405 aaPredicted RBP4.98□□□□□ -1.61
RORA-207ENST00000558234 R4GN34 69 aa4.97□□□□□ -1.61
RORA-207ENST00000558234 FSIP2Q5CZC0 6907 aa4.97□□□□□ -1.61
RORA-207ENST00000558234 A0A0D9SG42 100 aa4.89□□□□□ -1.63
RORA-207ENST00000558234 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
RORA-207ENST00000558234 MT1XP80297 61 aa4.85□□□□□ -1.63
RORA-207ENST00000558234 PMAIP1Q13794 54 aa4.82□□□□□ -1.64
RORA-207ENST00000558234 C10orf95Q9H7T3 257 aa4.8□□□□□ -1.64
RORA-207ENST00000558234 LINC01554Q52M75 96 aa4.77□□□□□ -1.65
RORA-207ENST00000558234 SPINT4Q6UDR6 99 aa4.76□□□□□ -1.65
RORA-207ENST00000558234 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
RORA-207ENST00000558234 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
RORA-207ENST00000558234 ROMO1P60602 79 aa4.72□□□□□ -1.65
RORA-207ENST00000558234 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.71□□□□□ -1.65
RORA-207ENST00000558234 K7ERS5 55 aa4.7□□□□□ -1.66
RORA-207ENST00000558234 PLAC4Q8WY50 150 aa4.65□□□□□ -1.66
RORA-207ENST00000558234 KRTAP10-12P60413 245 aa4.65□□□□□ -1.67
RORA-207ENST00000558234 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.67
RORA-207ENST00000558234 KMT2DO14686 5537 aa4.59□□□□□ -1.67
RORA-207ENST00000558234 KRTAP10-7P60409 375 aaPredicted RBP4.59□□□□□ -1.68
RORA-207ENST00000558234 PRAC1Q96KF2 57 aa4.59□□□□□ -1.68
RORA-207ENST00000558234 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
RORA-207ENST00000558234 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
RORA-207ENST00000558234 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
RORA-207ENST00000558234 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
RORA-207ENST00000558234 CAMK2N1Q7Z7J9 78 aa4.56□□□□□ -1.68
RORA-207ENST00000558234 KRTAP6-3Q3LI67 103 aa4.53□□□□□ -1.68
RORA-207ENST00000558234 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
RORA-207ENST00000558234 KRTAP4-8A0A0G2JLE6 195 aa4.45□□□□□ -1.7
RORA-207ENST00000558234 TNP1P09430 55 aa4.45□□□□□ -1.7
RORA-207ENST00000558234 KRTAP4-8Q9BYQ9 185 aa4.45□□□□□ -1.7
RORA-207ENST00000558234 MUC12Q9UKN1 5478 aa4.43□□□□□ -1.7
RORA-207ENST00000558234 LCE3AQ5TA76 89 aa4.4□□□□□ -1.7
RORA-207ENST00000558234 KRTAP8-1Q8IUC2 63 aa4.4□□□□□ -1.71
RORA-207ENST00000558234 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
RORA-207ENST00000558234 NEBP20929 6669 aa4.37□□□□□ -1.71
RORA-207ENST00000558234 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
RORA-207ENST00000558234 MDN1Q9NU22 5596 aa4.35□□□□□ -1.71
RORA-207ENST00000558234 H3BS24 57 aa4.27□□□□□ -1.73
RORA-207ENST00000558234 MT1EP04732 61 aa4.26□□□□□ -1.73
RORA-207ENST00000558234 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms