RNA–Protein interactions for RNA: ENST00000558099.1

CSHL1-207, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2

Gene CSHL1, Length 1,590 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-207ENST00000558099 IGKV2-30P06310 120 aa7.64□□□□□ -1.19
CSHL1-207ENST00000558099 MIR22HGQ0VDD5 57 aa7.64□□□□□ -1.19
CSHL1-207ENST00000558099 LINC01554Q52M75 96 aa7.64□□□□□ -1.19
CSHL1-207ENST00000558099 TYMSOSQ8TAI1 123 aa7.59□□□□□ -1.19
CSHL1-207ENST00000558099 RETNLBQ9BQ08 111 aa7.59□□□□□ -1.19
CSHL1-207ENST00000558099 PRAC1Q96KF2 57 aa7.57□□□□□ -1.2
CSHL1-207ENST00000558099 C4orf48Q5BLP8 95 aa7.55□□□□□ -1.2
CSHL1-207ENST00000558099 MUC17Q685J3 4493 aa7.54□□□□□ -1.2
CSHL1-207ENST00000558099 SPINK1P00995 79 aa7.52□□□□□ -1.21
CSHL1-207ENST00000558099 IGKV2D-30A0A075B6S6 120 aa7.5□□□□□ -1.21
CSHL1-207ENST00000558099 LINC00304Q8N9R0 145 aa7.5□□□□□ -1.21
CSHL1-207ENST00000558099 RPS29P62273 56 aaKnown RBP7.5□□□□□ -1.21
CSHL1-207ENST00000558099 ADM2Q7Z4H4 148 aa7.49□□□□□ -1.21
CSHL1-207ENST00000558099 KRTAP16-1A8MUX0 517 aa7.47□□□□□ -1.21
CSHL1-207ENST00000558099 FAT4Q6V0I7 4981 aa7.46□□□□□ -1.21
CSHL1-207ENST00000558099 TPRXLQ17RH7 258 aa7.42□□□□□ -1.22
CSHL1-207ENST00000558099 CSAG1Q6PB30 78 aa7.39□□□□□ -1.23
CSHL1-207ENST00000558099 LCE2AQ5TA79 106 aaPredicted RBP7.35□□□□□ -1.23
CSHL1-207ENST00000558099 A8MUU9 505 aa7.29□□□□□ -1.24
CSHL1-207ENST00000558099 H3BS24 57 aa7.27□□□□□ -1.25
CSHL1-207ENST00000558099 KRTAP25-1Q3LHN0 102 aa7.26□□□□□ -1.25
CSHL1-207ENST00000558099 KRTAP4-1Q9BYQ7 146 aa7.24□□□□□ -1.25
CSHL1-207ENST00000558099 A0A1B0GU33 70 aa7.22□□□□□ -1.25
CSHL1-207ENST00000558099 H0YAA0 97 aa7.2□□□□□ -1.26
CSHL1-207ENST00000558099 K7ERS5 55 aa7.2□□□□□ -1.26
CSHL1-207ENST00000558099 XP32Q5T750 250 aa7.2□□□□□ -1.26
CSHL1-207ENST00000558099 H1FX-AS1Q4G0G2 97 aa7.19□□□□□ -1.26
CSHL1-207ENST00000558099 ROMO1P60602 79 aa7.14□□□□□ -1.27
CSHL1-207ENST00000558099 KRTAP9-2Q9BYQ4 174 aa7.13□□□□□ -1.27
CSHL1-207ENST00000558099 C9orf92A6NGG3 77 aa7.12□□□□□ -1.27
CSHL1-207ENST00000558099 SEC61BP60468 96 aaKnown RBP7.12□□□□□ -1.27
CSHL1-207ENST00000558099 KRTAP19-2Q3LHN2 52 aa7.11□□□□□ -1.27
CSHL1-207ENST00000558099 C20orf166-AS1Q96NR2 134 aa7.11□□□□□ -1.27
CSHL1-207ENST00000558099 LCE2CQ5TA81 110 aa7.1□□□□□ -1.27
CSHL1-207ENST00000558099 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
CSHL1-207ENST00000558099 COX6B2Q6YFQ2 88 aa6.99□□□□□ -1.29
CSHL1-207ENST00000558099 RPL37P61927 97 aaKnown RBP6.97□□□□□ -1.29
CSHL1-207ENST00000558099 KRTAP9-6A0A140TA67 174 aa6.95□□□□□ -1.3
CSHL1-207ENST00000558099 LCE2DQ5TA82 110 aaPredicted RBP6.95□□□□□ -1.3
CSHL1-207ENST00000558099 MT1HP80294 61 aa6.94□□□□□ -1.3
CSHL1-207ENST00000558099 FLGP20930 4061 aaPredicted RBP6.93□□□□□ -1.3
CSHL1-207ENST00000558099 FSIP2Q5CZC0 6907 aa6.89□□□□□ -1.31
CSHL1-207ENST00000558099 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.31
CSHL1-207ENST00000558099 P0C880 135 aa6.82□□□□□ -1.32
CSHL1-207ENST00000558099 KRTAP10-6P60371 365 aaPredicted RBP6.81□□□□□ -1.32
CSHL1-207ENST00000558099 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
CSHL1-207ENST00000558099 CRIPTQ9P021 101 aa6.76□□□□□ -1.33
CSHL1-207ENST00000558099 KRTAP3-3Q9BYR6 98 aa6.73□□□□□ -1.33
CSHL1-207ENST00000558099 KRTAP3-2Q9BYR7 98 aa6.73□□□□□ -1.33
CSHL1-207ENST00000558099 CRCT1Q9UGL9 99 aa6.72□□□□□ -1.33
CSHL1-207ENST00000558099 S4R3F8 94 aa6.69□□□□□ -1.34
CSHL1-207ENST00000558099 KRTAP15-1Q3LI76 137 aa6.68□□□□□ -1.34
CSHL1-207ENST00000558099 KRTAP13-4Q3LI77 160 aa6.68□□□□□ -1.34
CSHL1-207ENST00000558099 A0A0D9SG42 100 aa6.65□□□□□ -1.35
CSHL1-207ENST00000558099 M0R2T5 61 aa6.62□□□□□ -1.35
CSHL1-207ENST00000558099 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
CSHL1-207ENST00000558099 USH2AO75445 5202 aa6.6□□□□□ -1.35
CSHL1-207ENST00000558099 M0QZ58 72 aa6.58□□□□□ -1.36
CSHL1-207ENST00000558099 SSPOA2VEC9 5147 aa6.55□□□□□ -1.36
CSHL1-207ENST00000558099 NDUFAF8A1L188 74 aa6.53□□□□□ -1.36
CSHL1-207ENST00000558099 KRTAP12-1P59990 96 aa6.53□□□□□ -1.36
CSHL1-207ENST00000558099 C10orf95Q9H7T3 257 aa6.53□□□□□ -1.36
CSHL1-207ENST00000558099 KRTAP12-2P59991 146 aa6.52□□□□□ -1.36
CSHL1-207ENST00000558099 MT2AP02795 61 aa6.46□□□□□ -1.38
CSHL1-207ENST00000558099 MT1FP04733 61 aa6.41□□□□□ -1.38
CSHL1-207ENST00000558099 A0A0A0MQY5 61 aa6.4□□□□□ -1.38
CSHL1-207ENST00000558099 KRTAP9-3Q9BYQ3 159 aa6.4□□□□□ -1.39
CSHL1-207ENST00000558099 FCGBPQ9Y6R7 5405 aaPredicted RBP6.38□□□□□ -1.39
CSHL1-207ENST00000558099 LCE2BO14633 110 aa6.38□□□□□ -1.39
CSHL1-207ENST00000558099 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
CSHL1-207ENST00000558099 KRTAP10-10P60014 251 aa6.27□□□□□ -1.41
CSHL1-207ENST00000558099 PLAC4Q8WY50 150 aa6.25□□□□□ -1.41
CSHL1-207ENST00000558099 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
CSHL1-207ENST00000558099 PP632Q6XCG6 107 aa6.23□□□□□ -1.41
CSHL1-207ENST00000558099 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
CSHL1-207ENST00000558099 MACF1Q9UPN3 7388 aaKnown RBP6.2□□□□□ -1.42
CSHL1-207ENST00000558099 R4GN34 69 aa6.19□□□□□ -1.42
CSHL1-207ENST00000558099 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
CSHL1-207ENST00000558099 KRTAP19-6Q3LI70 58 aa6.15□□□□□ -1.42
CSHL1-207ENST00000558099 LUZP6Q538Z0 58 aa6.1□□□□□ -1.43
CSHL1-207ENST00000558099 KRTAP23-1A1A580 65 aa6.02□□□□□ -1.45
CSHL1-207ENST00000558099 CAMK2N1Q7Z7J9 78 aa5.92□□□□□ -1.46
CSHL1-207ENST00000558099 MT1BP07438 61 aa5.9□□□□□ -1.46
CSHL1-207ENST00000558099 SPRR2GQ9BYE4 73 aa5.89□□□□□ -1.47
CSHL1-207ENST00000558099 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
CSHL1-207ENST00000558099 KRTAP6-3Q3LI67 103 aa5.87□□□□□ -1.47
CSHL1-207ENST00000558099 SPRR5A0A1B0GTR4 108 aa5.85□□□□□ -1.47
CSHL1-207ENST00000558099 NEBP20929 6669 aa5.84□□□□□ -1.47
CSHL1-207ENST00000558099 TNP1P09430 55 aa5.83□□□□□ -1.48
CSHL1-207ENST00000558099 MUC12Q9UKN1 5478 aa5.76□□□□□ -1.49
CSHL1-207ENST00000558099 KRTAP10-5P60370 271 aa5.75□□□□□ -1.49
CSHL1-207ENST00000558099 KMT2DO14686 5537 aa5.63□□□□□ -1.51
CSHL1-207ENST00000558099 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
CSHL1-207ENST00000558099 MDN1Q9NU22 5596 aa5.62□□□□□ -1.51
CSHL1-207ENST00000558099 PRO2289Q9P1D8 64 aa5.55□□□□□ -1.52
CSHL1-207ENST00000558099 INE1O15225 51 aa5.52□□□□□ -1.53
CSHL1-207ENST00000558099 MT1XP80297 61 aa5.5□□□□□ -1.53
CSHL1-207ENST00000558099 KRTAP20-1Q3LI63 56 aa5.42□□□□□ -1.54
CSHL1-207ENST00000558099 KRTAP8-1Q8IUC2 63 aa5.36□□□□□ -1.55
CSHL1-207ENST00000558099 LCE3AQ5TA76 89 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms