RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 C5orf47Q569G3 176 aa3.98□□□□□ -1.77
SPG11-205ENST00000558080 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
SPG11-205ENST00000558080 MRPL34Q9BQ48 92 aaKnown RBP3.98□□□□□ -1.77
SPG11-205ENST00000558080 COX6B2Q6YFQ2 88 aa3.97□□□□□ -1.77
SPG11-205ENST00000558080 TP53AIP1Q9HCN2 124 aa3.97□□□□□ -1.77
SPG11-205ENST00000558080 NDUFC1O43677 76 aa3.96□□□□□ -1.78
SPG11-205ENST00000558080 MP68P56378 58 aa3.96□□□□□ -1.78
SPG11-205ENST00000558080 LINC00313P59037 77 aa3.96□□□□□ -1.78
SPG11-205ENST00000558080 H3BPC8 53 aa3.95□□□□□ -1.78
SPG11-205ENST00000558080 M0R2T5 61 aa3.95□□□□□ -1.78
SPG11-205ENST00000558080 TMEM258P61165 79 aa3.95□□□□□ -1.78
SPG11-205ENST00000558080 ATP11AUNQ6ZP68 121 aa3.95□□□□□ -1.78
SPG11-205ENST00000558080 H0Y9P7 68 aa3.94□□□□□ -1.78
SPG11-205ENST00000558080 NDUFS5O43920 106 aa3.94□□□□□ -1.78
SPG11-205ENST00000558080 NOTCH2NLQ7Z3S9 236 aa3.94□□□□□ -1.78
SPG11-205ENST00000558080 SNURFQ9Y675 71 aa3.94□□□□□ -1.78
SPG11-205ENST00000558080 TRAV22A0A0B4J277 110 aa3.93□□□□□ -1.78
SPG11-205ENST00000558080 Q75L30 129 aa3.93□□□□□ -1.78
SPG11-205ENST00000558080 MPLKIPQ8TAP9 179 aa3.93□□□□□ -1.78
SPG11-205ENST00000558080 CYSTM1Q9H1C7 97 aa3.93□□□□□ -1.78
SPG11-205ENST00000558080 H7BZZ5 65 aa3.91□□□□□ -1.78
SPG11-205ENST00000558080 ZCCHC13Q8WW36 166 aaKnown RBP3.91□□□□□ -1.78
SPG11-205ENST00000558080 KRTAP16-1A8MUX0 517 aa3.9□□□□□ -1.79
SPG11-205ENST00000558080 ATP5EP56381 51 aaPredicted RBP3.9□□□□□ -1.79
SPG11-205ENST00000558080 LINC00208Q96KT6 92 aa3.9□□□□□ -1.79
SPG11-205ENST00000558080 C20orf166-AS1Q96NR2 134 aa3.9□□□□□ -1.79
SPG11-205ENST00000558080 CRCT1Q9UGL9 99 aa3.9□□□□□ -1.79
SPG11-205ENST00000558080 FSIP2Q5CZC0 6907 aa3.9□□□□□ -1.79
SPG11-205ENST00000558080 FLGP20930 4061 aaPredicted RBP3.89□□□□□ -1.79
SPG11-205ENST00000558080 FAM236DA0A1B0GTK5 79 aa3.89□□□□□ -1.79
SPG11-205ENST00000558080 A8MUU9 505 aa3.89□□□□□ -1.79
SPG11-205ENST00000558080 FAM236CP0DP71 79 aa3.89□□□□□ -1.79
SPG11-205ENST00000558080 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
SPG11-205ENST00000558080 C1orf64Q8NEQ6 169 aa3.88□□□□□ -1.79
SPG11-205ENST00000558080 LOC101927531A0A1B0GV80 90 aa3.87□□□□□ -1.79
SPG11-205ENST00000558080 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
SPG11-205ENST00000558080 Q5W150 140 aa3.84□□□□□ -1.79
SPG11-205ENST00000558080 SPANXA2-OT1Q8N9U9 137 aa3.83□□□□□ -1.8
SPG11-205ENST00000558080 RPS28P62857 69 aaKnown RBP3.82□□□□□ -1.8
SPG11-205ENST00000558080 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
SPG11-205ENST00000558080 SERP1Q9Y6X1 66 aa3.82□□□□□ -1.8
SPG11-205ENST00000558080 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
SPG11-205ENST00000558080 CYP4F30PQ9H0H9 118 aa3.81□□□□□ -1.8
SPG11-205ENST00000558080 HRES1P13985 223 aa3.78□□□□□ -1.8
SPG11-205ENST00000558080 C7orf65Q6ZTY9 151 aa3.78□□□□□ -1.8
SPG11-205ENST00000558080 RBM12B-AS1Q9P1G2 102 aa3.77□□□□□ -1.81
SPG11-205ENST00000558080 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
SPG11-205ENST00000558080 MT2AP02795 61 aa3.73□□□□□ -1.81
SPG11-205ENST00000558080 SMIM26A0A096LP01 95 aa3.72□□□□□ -1.81
SPG11-205ENST00000558080 SPINK7P58062 85 aa3.72□□□□□ -1.81
SPG11-205ENST00000558080 USH2AO75445 5202 aa3.71□□□□□ -1.82
SPG11-205ENST00000558080 ACYP2P14621 99 aa3.71□□□□□ -1.82
SPG11-205ENST00000558080 COA5Q86WW8 74 aa3.71□□□□□ -1.82
SPG11-205ENST00000558080 DMAC1Q96GE9 116 aa3.71□□□□□ -1.82
SPG11-205ENST00000558080 MT1FP04733 61 aa3.7□□□□□ -1.82
SPG11-205ENST00000558080 SSPOA2VEC9 5147 aa3.7□□□□□ -1.82
SPG11-205ENST00000558080 A8MUN3 132 aa3.69□□□□□ -1.82
SPG11-205ENST00000558080 KRTAP10-10P60014 251 aa3.69□□□□□ -1.82
SPG11-205ENST00000558080 CHKB-CPT1BH3BT56 60 aa3.66□□□□□ -1.82
SPG11-205ENST00000558080 V9GYY9 64 aa3.66□□□□□ -1.82
SPG11-205ENST00000558080 C4orf26Q17RF5 130 aa3.65□□□□□ -1.83
SPG11-205ENST00000558080 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
SPG11-205ENST00000558080 Q1T7F1 81 aa3.63□□□□□ -1.83
SPG11-205ENST00000558080 FCGBPQ9Y6R7 5405 aaPredicted RBP3.6□□□□□ -1.83
SPG11-205ENST00000558080 H1FX-AS1Q4G0G2 97 aa3.6□□□□□ -1.83
SPG11-205ENST00000558080 SPTSSBQ8NFR3 76 aa3.6□□□□□ -1.83
SPG11-205ENST00000558080 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
SPG11-205ENST00000558080 LINC01558Q9Y6Z2 57 aa3.58□□□□□ -1.84
SPG11-205ENST00000558080 PRR15LQ9BU68 103 aa3.55□□□□□ -1.84
SPG11-205ENST00000558080 PSPHP1O15172 72 aa3.54□□□□□ -1.84
SPG11-205ENST00000558080 A0A1B0GU69 56 aa3.52□□□□□ -1.85
SPG11-205ENST00000558080 KRTAP19-6Q3LI70 58 aa3.52□□□□□ -1.85
SPG11-205ENST00000558080 Q5VV11 94 aa3.52□□□□□ -1.85
SPG11-205ENST00000558080 S4R3F8 94 aa3.52□□□□□ -1.85
SPG11-205ENST00000558080 SEC61GP60059 68 aa3.5□□□□□ -1.85
SPG11-205ENST00000558080 LCA10Q71F78 164 aa3.49□□□□□ -1.85
SPG11-205ENST00000558080 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
SPG11-205ENST00000558080 A6NED7 52 aa3.46□□□□□ -1.86
SPG11-205ENST00000558080 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
SPG11-205ENST00000558080 BRK1Q8WUW1 75 aa3.45□□□□□ -1.86
SPG11-205ENST00000558080 CSAG1Q6PB30 78 aa3.44□□□□□ -1.86
SPG11-205ENST00000558080 UQCR11O14957 56 aa3.42□□□□□ -1.86
SPG11-205ENST00000558080 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
SPG11-205ENST00000558080 PRO0628Q9UI54 55 aa3.41□□□□□ -1.86
SPG11-205ENST00000558080 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.86
SPG11-205ENST00000558080 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
SPG11-205ENST00000558080 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
SPG11-205ENST00000558080 A0A1B0GU33 70 aa3.38□□□□□ -1.87
SPG11-205ENST00000558080 MT1BP07438 61 aa3.38□□□□□ -1.87
SPG11-205ENST00000558080 MIR22HGQ0VDD5 57 aa3.38□□□□□ -1.87
SPG11-205ENST00000558080 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
SPG11-205ENST00000558080 H0YAA0 97 aa3.37□□□□□ -1.87
SPG11-205ENST00000558080 SPATA8Q6RVD6 105 aa3.37□□□□□ -1.87
SPG11-205ENST00000558080 A6NN06 94 aa3.36□□□□□ -1.87
SPG11-205ENST00000558080 KRTAP19-8Q3LI54 63 aa3.36□□□□□ -1.87
SPG11-205ENST00000558080 SPRR2GQ9BYE4 73 aa3.36□□□□□ -1.87
SPG11-205ENST00000558080 ADM2Q7Z4H4 148 aa3.35□□□□□ -1.87
SPG11-205ENST00000558080 A8MU10 97 aa3.33□□□□□ -1.88
SPG11-205ENST00000558080 P0C880 135 aa3.32□□□□□ -1.88
SPG11-205ENST00000558080 M0QZ58 72 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms