RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
CPNE6-204ENST00000557829 A8MUU9 505 aa7.19□□□□□ -1.26
CPNE6-204ENST00000557829 DMBT1Q9UGM3 2413 aaPredicted RBP7.18□□□□□ -1.26
CPNE6-204ENST00000557829 HERC1Q15751 4861 aa7.17□□□□□ -1.26
CPNE6-204ENST00000557829 FAT3Q8TDW7 4589 aa7.16□□□□□ -1.26
CPNE6-204ENST00000557829 CSAG1Q6PB30 78 aa7.15□□□□□ -1.26
CPNE6-204ENST00000557829 TNXBP22105 4242 aa7.14□□□□□ -1.27
CPNE6-204ENST00000557829 KRTAP10-8P60410 259 aa7.1□□□□□ -1.27
CPNE6-204ENST00000557829 KRTAP3-1Q9BYR8 98 aa7.07□□□□□ -1.28
CPNE6-204ENST00000557829 C9orf92A6NGG3 77 aa7.06□□□□□ -1.28
CPNE6-204ENST00000557829 MT1HL1P0DM35 61 aa7.06□□□□□ -1.28
CPNE6-204ENST00000557829 H0YAA0 97 aa7.04□□□□□ -1.28
CPNE6-204ENST00000557829 A0A1B0GU33 70 aa7.03□□□□□ -1.28
CPNE6-204ENST00000557829 KRTAP25-1Q3LHN0 102 aa7.03□□□□□ -1.28
CPNE6-204ENST00000557829 H1FX-AS1Q4G0G2 97 aa7.02□□□□□ -1.29
CPNE6-204ENST00000557829 H3BS24 57 aa7.01□□□□□ -1.29
CPNE6-204ENST00000557829 COX6B2Q6YFQ2 88 aa6.99□□□□□ -1.29
CPNE6-204ENST00000557829 J3QL48 77 aa6.96□□□□□ -1.3
CPNE6-204ENST00000557829 K7ERS5 55 aa6.96□□□□□ -1.3
CPNE6-204ENST00000557829 ROMO1P60602 79 aa6.92□□□□□ -1.3
CPNE6-204ENST00000557829 HMCN2Q8NDA2 5059 aa6.89□□□□□ -1.31
CPNE6-204ENST00000557829 RPL37P61927 97 aaKnown RBP6.8□□□□□ -1.32
CPNE6-204ENST00000557829 LRP2P98164 4655 aa6.79□□□□□ -1.32
CPNE6-204ENST00000557829 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
CPNE6-204ENST00000557829 KRTAP10-6P60371 365 aaPredicted RBP6.76□□□□□ -1.33
CPNE6-204ENST00000557829 LPAP08519 4548 aa6.76□□□□□ -1.33
CPNE6-204ENST00000557829 UBR4Q5T4S7 5183 aa6.76□□□□□ -1.33
CPNE6-204ENST00000557829 XP32Q5T750 250 aa6.72□□□□□ -1.33
CPNE6-204ENST00000557829 KRTAP3-2Q9BYR7 98 aa6.71□□□□□ -1.33
CPNE6-204ENST00000557829 S4R3F8 94 aa6.71□□□□□ -1.33
CPNE6-204ENST00000557829 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
CPNE6-204ENST00000557829 KRTAP13-4Q3LI77 160 aa6.66□□□□□ -1.34
CPNE6-204ENST00000557829 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
CPNE6-204ENST00000557829 P0C880 135 aa6.61□□□□□ -1.35
CPNE6-204ENST00000557829 A0A0D9SG42 100 aa6.58□□□□□ -1.36
CPNE6-204ENST00000557829 CRIPTQ9P021 101 aa6.57□□□□□ -1.36
CPNE6-204ENST00000557829 MUC2Q02817 5179 aa6.55□□□□□ -1.36
CPNE6-204ENST00000557829 SPINT4Q6UDR6 99 aa6.52□□□□□ -1.36
CPNE6-204ENST00000557829 M0QZ58 72 aa6.48□□□□□ -1.37
CPNE6-204ENST00000557829 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
CPNE6-204ENST00000557829 KRTAP12-2P59991 146 aa6.46□□□□□ -1.38
CPNE6-204ENST00000557829 KRTAP12-1P59990 96 aa6.45□□□□□ -1.38
CPNE6-204ENST00000557829 SEC61BP60468 96 aaKnown RBP6.43□□□□□ -1.38
CPNE6-204ENST00000557829 MUC17Q685J3 4493 aa6.42□□□□□ -1.38
CPNE6-204ENST00000557829 KRTAP4-1Q9BYQ7 146 aa6.4□□□□□ -1.38
CPNE6-204ENST00000557829 C10orf95Q9H7T3 257 aa6.36□□□□□ -1.39
CPNE6-204ENST00000557829 NDUFAF8A1L188 74 aa6.31□□□□□ -1.4
CPNE6-204ENST00000557829 FAT4Q6V0I7 4981 aa6.29□□□□□ -1.4
CPNE6-204ENST00000557829 R4GN34 69 aa6.21□□□□□ -1.41
CPNE6-204ENST00000557829 KRTAP19-2Q3LHN2 52 aa6.2□□□□□ -1.42
CPNE6-204ENST00000557829 LCE2CQ5TA81 110 aa6.08□□□□□ -1.44
CPNE6-204ENST00000557829 FLGP20930 4061 aaPredicted RBP6.07□□□□□ -1.44
CPNE6-204ENST00000557829 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
CPNE6-204ENST00000557829 LORP23490 312 aaPredicted RBP6.06□□□□□ -1.44
CPNE6-204ENST00000557829 PLAC4Q8WY50 150 aa6.04□□□□□ -1.44
CPNE6-204ENST00000557829 LCE2AQ5TA79 106 aaPredicted RBP6.03□□□□□ -1.44
CPNE6-204ENST00000557829 MT1HP80294 61 aa5.94□□□□□ -1.46
CPNE6-204ENST00000557829 LUZP6Q538Z0 58 aa5.9□□□□□ -1.46
CPNE6-204ENST00000557829 CAMK2N1Q7Z7J9 78 aa5.9□□□□□ -1.47
CPNE6-204ENST00000557829 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
CPNE6-204ENST00000557829 M0R2T5 61 aa5.85□□□□□ -1.47
CPNE6-204ENST00000557829 A0A0A0MQY5 61 aa5.84□□□□□ -1.47
CPNE6-204ENST00000557829 TNP1P09430 55 aa5.75□□□□□ -1.49
CPNE6-204ENST00000557829 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
CPNE6-204ENST00000557829 KRTAP9-8Q9BYQ0 159 aa5.72□□□□□ -1.49
CPNE6-204ENST00000557829 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.5
CPNE6-204ENST00000557829 KRTAP9-2Q9BYQ4 174 aa5.7□□□□□ -1.5
CPNE6-204ENST00000557829 MT2AP02795 61 aa5.7□□□□□ -1.5
CPNE6-204ENST00000557829 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
CPNE6-204ENST00000557829 MT1FP04733 61 aa5.67□□□□□ -1.5
CPNE6-204ENST00000557829 KRTAP10-10P60014 251 aa5.63□□□□□ -1.51
CPNE6-204ENST00000557829 SPRR2GQ9BYE4 73 aa5.62□□□□□ -1.51
CPNE6-204ENST00000557829 LCE2DQ5TA82 110 aaPredicted RBP5.57□□□□□ -1.52
CPNE6-204ENST00000557829 KRTAP19-1Q8IUB9 90 aa5.55□□□□□ -1.52
CPNE6-204ENST00000557829 USH2AO75445 5202 aa5.53□□□□□ -1.52
CPNE6-204ENST00000557829 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
CPNE6-204ENST00000557829 LCE2BO14633 110 aa5.41□□□□□ -1.54
CPNE6-204ENST00000557829 SSPOA2VEC9 5147 aa5.4□□□□□ -1.54
CPNE6-204ENST00000557829 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
CPNE6-204ENST00000557829 KRTAP19-8Q3LI54 63 aa5.39□□□□□ -1.55
CPNE6-204ENST00000557829 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
CPNE6-204ENST00000557829 MT1BP07438 61 aa5.36□□□□□ -1.55
CPNE6-204ENST00000557829 PRO2289Q9P1D8 64 aa5.35□□□□□ -1.55
CPNE6-204ENST00000557829 INE1O15225 51 aa5.33□□□□□ -1.56
CPNE6-204ENST00000557829 KRTAP8-1Q8IUC2 63 aa5.32□□□□□ -1.56
CPNE6-204ENST00000557829 FCGBPQ9Y6R7 5405 aaPredicted RBP5.23□□□□□ -1.57
CPNE6-204ENST00000557829 KRTAP10-5P60370 271 aa5.23□□□□□ -1.57
CPNE6-204ENST00000557829 MT1XP80297 61 aa5.22□□□□□ -1.57
CPNE6-204ENST00000557829 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
CPNE6-204ENST00000557829 KRTAP12-3P60328 96 aa5.14□□□□□ -1.59
CPNE6-204ENST00000557829 KRTAP19-6Q3LI70 58 aa5.12□□□□□ -1.59
CPNE6-204ENST00000557829 MACF1Q9UPN3 7388 aaKnown RBP5.11□□□□□ -1.59
CPNE6-204ENST00000557829 SYNE2Q8WXH0 6885 aaKnown RBP5.04□□□□□ -1.6
CPNE6-204ENST00000557829 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
CPNE6-204ENST00000557829 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
CPNE6-204ENST00000557829 KRTAP9-7A8MTY7 169 aa5.01□□□□□ -1.61
CPNE6-204ENST00000557829 KMT2DO14686 5537 aa4.87□□□□□ -1.63
CPNE6-204ENST00000557829 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
CPNE6-204ENST00000557829 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
CPNE6-204ENST00000557829 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms