RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 SPRR2BP35325 72 aa6.42□□□□□ -1.38
TMEM260-215ENST00000557626 SPRR2AP35326 72 aa6.42□□□□□ -1.38
TMEM260-215ENST00000557626 HIST1H4AP62805 103 aaKnown RBP6.42□□□□□ -1.38
TMEM260-215ENST00000557626 Q5W150 140 aa6.4□□□□□ -1.38
TMEM260-215ENST00000557626 ZCCHC13Q8WW36 166 aaKnown RBP6.39□□□□□ -1.39
TMEM260-215ENST00000557626 KRTAP4-9Q9BYQ8 210 aa6.36□□□□□ -1.39
TMEM260-215ENST00000557626 IMUPQ9GZP8 106 aa6.35□□□□□ -1.39
TMEM260-215ENST00000557626 NDUFS5O43920 106 aa6.34□□□□□ -1.39
TMEM260-215ENST00000557626 OCR1Q9BZK8 76 aa6.3□□□□□ -1.4
TMEM260-215ENST00000557626 LCE4AQ5TA78 99 aa6.29□□□□□ -1.4
TMEM260-215ENST00000557626 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
TMEM260-215ENST00000557626 RBM12B-AS1Q9P1G2 102 aa6.28□□□□□ -1.4
TMEM260-215ENST00000557626 HRES1P13985 223 aa6.27□□□□□ -1.41
TMEM260-215ENST00000557626 SPINK7P58062 85 aa6.27□□□□□ -1.41
TMEM260-215ENST00000557626 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.41
TMEM260-215ENST00000557626 FAM236AA0A1B0GUQ0 79 aa6.25□□□□□ -1.41
TMEM260-215ENST00000557626 FAM236BA0A1B0GV22 79 aa6.25□□□□□ -1.41
TMEM260-215ENST00000557626 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
TMEM260-215ENST00000557626 MPLKIPQ8TAP9 179 aa6.25□□□□□ -1.41
TMEM260-215ENST00000557626 KRTAP4-2Q9BYR5 136 aa6.25□□□□□ -1.41
TMEM260-215ENST00000557626 UQCRQO14949 82 aa6.23□□□□□ -1.41
TMEM260-215ENST00000557626 SPRR2DP22532 72 aa6.23□□□□□ -1.41
TMEM260-215ENST00000557626 IGKV2-30P06310 120 aa6.22□□□□□ -1.41
TMEM260-215ENST00000557626 IGKV2D-30A0A075B6S6 120 aa6.2□□□□□ -1.42
TMEM260-215ENST00000557626 TRAV22A0A0B4J277 110 aa6.2□□□□□ -1.42
TMEM260-215ENST00000557626 H0Y9P7 68 aa6.18□□□□□ -1.42
TMEM260-215ENST00000557626 SCGB1A1P11684 91 aa6.18□□□□□ -1.42
TMEM260-215ENST00000557626 C7orf65Q6ZTY9 151 aa6.17□□□□□ -1.42
TMEM260-215ENST00000557626 H3BS24 57 aa6.16□□□□□ -1.42
TMEM260-215ENST00000557626 LCE1AQ5T7P2 110 aa6.16□□□□□ -1.42
TMEM260-215ENST00000557626 CYP4F30PQ9H0H9 118 aa6.16□□□□□ -1.42
TMEM260-215ENST00000557626 KRTAP10-5P60370 271 aa6.15□□□□□ -1.42
TMEM260-215ENST00000557626 TRAV7A0A075B6U4 112 aa6.14□□□□□ -1.43
TMEM260-215ENST00000557626 C5orf47Q569G3 176 aa6.13□□□□□ -1.43
TMEM260-215ENST00000557626 LOC101927531A0A1B0GV80 90 aa6.12□□□□□ -1.43
TMEM260-215ENST00000557626 ATOX1O00244 68 aa6.12□□□□□ -1.43
TMEM260-215ENST00000557626 LINC00208Q96KT6 92 aa6.12□□□□□ -1.43
TMEM260-215ENST00000557626 KRTAP4-11Q9BYQ6 195 aa6.12□□□□□ -1.43
TMEM260-215ENST00000557626 C1orf64Q8NEQ6 169 aa6.11□□□□□ -1.43
TMEM260-215ENST00000557626 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
TMEM260-215ENST00000557626 KLKP1Q107X0 134 aa6.1□□□□□ -1.43
TMEM260-215ENST00000557626 SMIM20Q8N5G0 67 aa6.1□□□□□ -1.43
TMEM260-215ENST00000557626 C4orf26Q17RF5 130 aa6.09□□□□□ -1.43
TMEM260-215ENST00000557626 MP68P56378 58 aa6.08□□□□□ -1.44
TMEM260-215ENST00000557626 SERP2Q8N6R1 65 aa6.08□□□□□ -1.44
TMEM260-215ENST00000557626 H3BPC8 53 aa6.06□□□□□ -1.44
TMEM260-215ENST00000557626 MT1BP07438 61 aa6.06□□□□□ -1.44
TMEM260-215ENST00000557626 DSTQ03001 7570 aaKnown RBP6.04□□□□□ -1.44
TMEM260-215ENST00000557626 Q5VV11 94 aa6.03□□□□□ -1.44
TMEM260-215ENST00000557626 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
TMEM260-215ENST00000557626 COX7CP15954 63 aa6□□□□□ -1.45
TMEM260-215ENST00000557626 SNURFQ9Y675 71 aa6□□□□□ -1.45
TMEM260-215ENST00000557626 C20orf197Q8N268 126 aa5.99□□□□□ -1.45
TMEM260-215ENST00000557626 H1FX-AS1Q4G0G2 97 aa5.98□□□□□ -1.45
TMEM260-215ENST00000557626 CYSTM1Q9H1C7 97 aa5.97□□□□□ -1.45
TMEM260-215ENST00000557626 ANAPC13Q9BS18 74 aa5.96□□□□□ -1.46
TMEM260-215ENST00000557626 CCDC179H3BU77 68 aa5.91□□□□□ -1.46
TMEM260-215ENST00000557626 KRTAP8-1Q8IUC2 63 aa5.9□□□□□ -1.46
TMEM260-215ENST00000557626 DMAC1Q96GE9 116 aa5.89□□□□□ -1.47
TMEM260-215ENST00000557626 KRTAP19-8Q3LI54 63 aa5.88□□□□□ -1.47
TMEM260-215ENST00000557626 H7BZZ5 65 aa5.87□□□□□ -1.47
TMEM260-215ENST00000557626 LCA10Q71F78 164 aa5.87□□□□□ -1.47
TMEM260-215ENST00000557626 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
TMEM260-215ENST00000557626 A8MUN3 132 aa5.85□□□□□ -1.47
TMEM260-215ENST00000557626 SPANXA2-OT1Q8N9U9 137 aa5.84□□□□□ -1.47
TMEM260-215ENST00000557626 S4R3F8 94 aa5.84□□□□□ -1.47
TMEM260-215ENST00000557626 HMCN1Q96RW7 5635 aa5.82□□□□□ -1.48
TMEM260-215ENST00000557626 KRTAP5-10Q6L8G5 202 aa5.81□□□□□ -1.48
TMEM260-215ENST00000557626 NDUFC1O43677 76 aa5.79□□□□□ -1.48
TMEM260-215ENST00000557626 ACYP2P14621 99 aa5.75□□□□□ -1.49
TMEM260-215ENST00000557626 SPRR2GQ9BYE4 73 aa5.75□□□□□ -1.49
TMEM260-215ENST00000557626 CSAG1Q6PB30 78 aa5.74□□□□□ -1.49
TMEM260-215ENST00000557626 KRTAP5-7Q6L8G8 165 aa5.72□□□□□ -1.49
TMEM260-215ENST00000557626 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
TMEM260-215ENST00000557626 COA5Q86WW8 74 aa5.67□□□□□ -1.5
TMEM260-215ENST00000557626 PCP4P48539 62 aa5.66□□□□□ -1.5
TMEM260-215ENST00000557626 H0YAA0 97 aa5.62□□□□□ -1.51
TMEM260-215ENST00000557626 TMEM258P61165 79 aa5.62□□□□□ -1.51
TMEM260-215ENST00000557626 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
TMEM260-215ENST00000557626 CHKB-CPT1BH3BT56 60 aa5.6□□□□□ -1.51
TMEM260-215ENST00000557626 ATP5EP56381 51 aaPredicted RBP5.59□□□□□ -1.51
TMEM260-215ENST00000557626 ADM2Q7Z4H4 148 aa5.57□□□□□ -1.52
TMEM260-215ENST00000557626 P0C880 135 aa5.56□□□□□ -1.52
TMEM260-215ENST00000557626 SPTSSBQ8NFR3 76 aa5.54□□□□□ -1.52
TMEM260-215ENST00000557626 PRO2289Q9P1D8 64 aa5.54□□□□□ -1.52
TMEM260-215ENST00000557626 MT4P47944 62 aa5.52□□□□□ -1.53
TMEM260-215ENST00000557626 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
TMEM260-215ENST00000557626 SERP1Q9Y6X1 66 aa5.46□□□□□ -1.54
TMEM260-215ENST00000557626 MT1XP80297 61 aa5.44□□□□□ -1.54
TMEM260-215ENST00000557626 CRIPTQ9P021 101 aa5.44□□□□□ -1.54
TMEM260-215ENST00000557626 KRTAP13-4Q3LI77 160 aa5.38□□□□□ -1.55
TMEM260-215ENST00000557626 LINC01558Q9Y6Z2 57 aa5.36□□□□□ -1.55
TMEM260-215ENST00000557626 M0QZ58 72 aa5.35□□□□□ -1.55
TMEM260-215ENST00000557626 R4GN34 69 aa5.34□□□□□ -1.55
TMEM260-215ENST00000557626 RPS28P62857 69 aaKnown RBP5.33□□□□□ -1.56
TMEM260-215ENST00000557626 A0A1B0GU69 56 aa5.31□□□□□ -1.56
TMEM260-215ENST00000557626 SEC61GP60059 68 aa5.29□□□□□ -1.56
TMEM260-215ENST00000557626 A0A1B0GU33 70 aa5.28□□□□□ -1.56
TMEM260-215ENST00000557626 SMIM26A0A096LP01 95 aa5.26□□□□□ -1.57
TMEM260-215ENST00000557626 Q1T7F1 81 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms