RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 LCE2CQ5TA81 110 aa7.1□□□□□ -1.27
ARHGEF40-208ENST00000557498 SPTSSBQ8NFR3 76 aa7.1□□□□□ -1.27
ARHGEF40-208ENST00000557498 RNF213Q63HN8 5207 aa7.09□□□□□ -1.27
ARHGEF40-208ENST00000557498 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
ARHGEF40-208ENST00000557498 SMIM26A0A096LP01 95 aa7.06□□□□□ -1.28
ARHGEF40-208ENST00000557498 MUC2Q02817 5179 aa7.02□□□□□ -1.29
ARHGEF40-208ENST00000557498 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
ARHGEF40-208ENST00000557498 MT1HP80294 61 aa6.97□□□□□ -1.29
ARHGEF40-208ENST00000557498 Q1T7F1 81 aa6.95□□□□□ -1.3
ARHGEF40-208ENST00000557498 LINC01558Q9Y6Z2 57 aa6.95□□□□□ -1.3
ARHGEF40-208ENST00000557498 V9GYY9 64 aa6.95□□□□□ -1.3
ARHGEF40-208ENST00000557498 FLGP20930 4061 aaPredicted RBP6.94□□□□□ -1.3
ARHGEF40-208ENST00000557498 M0R2T5 61 aa6.88□□□□□ -1.31
ARHGEF40-208ENST00000557498 A0A1B0GU69 56 aa6.87□□□□□ -1.31
ARHGEF40-208ENST00000557498 PRR15LQ9BU68 103 aa6.87□□□□□ -1.31
ARHGEF40-208ENST00000557498 H0YAA0 97 aa6.86□□□□□ -1.31
ARHGEF40-208ENST00000557498 SEC61GP60059 68 aa6.86□□□□□ -1.31
ARHGEF40-208ENST00000557498 FAT4Q6V0I7 4981 aa6.85□□□□□ -1.31
ARHGEF40-208ENST00000557498 LCE2DQ5TA82 110 aaPredicted RBP6.83□□□□□ -1.32
ARHGEF40-208ENST00000557498 ADM2Q7Z4H4 148 aa6.83□□□□□ -1.32
ARHGEF40-208ENST00000557498 PSPHP1O15172 72 aa6.82□□□□□ -1.32
ARHGEF40-208ENST00000557498 KRTAP3-2Q9BYR7 98 aa6.81□□□□□ -1.32
ARHGEF40-208ENST00000557498 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
ARHGEF40-208ENST00000557498 P0C880 135 aa6.77□□□□□ -1.33
ARHGEF40-208ENST00000557498 LCE2AQ5TA79 106 aaPredicted RBP6.77□□□□□ -1.33
ARHGEF40-208ENST00000557498 Q5VV11 94 aa6.77□□□□□ -1.33
ARHGEF40-208ENST00000557498 A0A1B0GU33 70 aa6.69□□□□□ -1.34
ARHGEF40-208ENST00000557498 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
ARHGEF40-208ENST00000557498 KRTAP9-8Q9BYQ0 159 aa6.69□□□□□ -1.34
ARHGEF40-208ENST00000557498 MT2AP02795 61 aa6.67□□□□□ -1.34
ARHGEF40-208ENST00000557498 A6NED7 52 aa6.63□□□□□ -1.35
ARHGEF40-208ENST00000557498 UQCR11O14957 56 aa6.63□□□□□ -1.35
ARHGEF40-208ENST00000557498 MT1FP04733 61 aa6.63□□□□□ -1.35
ARHGEF40-208ENST00000557498 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
ARHGEF40-208ENST00000557498 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
ARHGEF40-208ENST00000557498 CRIPTQ9P021 101 aa6.6□□□□□ -1.35
ARHGEF40-208ENST00000557498 M0QZ58 72 aa6.59□□□□□ -1.35
ARHGEF40-208ENST00000557498 R4GN34 69 aa6.58□□□□□ -1.36
ARHGEF40-208ENST00000557498 SPATA8Q6RVD6 105 aa6.57□□□□□ -1.36
ARHGEF40-208ENST00000557498 MIR22HGQ0VDD5 57 aa6.56□□□□□ -1.36
ARHGEF40-208ENST00000557498 CDC42SE1Q9NRR8 79 aa6.5□□□□□ -1.37
ARHGEF40-208ENST00000557498 SPRR2GQ9BYE4 73 aa6.48□□□□□ -1.37
ARHGEF40-208ENST00000557498 A8MU10 97 aa6.47□□□□□ -1.37
ARHGEF40-208ENST00000557498 KRTAP19-1Q8IUB9 90 aa6.47□□□□□ -1.37
ARHGEF40-208ENST00000557498 A0A0D9SG42 100 aa6.46□□□□□ -1.38
ARHGEF40-208ENST00000557498 BRK1Q8WUW1 75 aa6.46□□□□□ -1.38
ARHGEF40-208ENST00000557498 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
ARHGEF40-208ENST00000557498 LINC01554Q52M75 96 aa6.44□□□□□ -1.38
ARHGEF40-208ENST00000557498 A6NN06 94 aa6.36□□□□□ -1.39
ARHGEF40-208ENST00000557498 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
ARHGEF40-208ENST00000557498 KRTAP19-8Q3LI54 63 aa6.34□□□□□ -1.39
ARHGEF40-208ENST00000557498 SPINT4Q6UDR6 99 aa6.32□□□□□ -1.4
ARHGEF40-208ENST00000557498 KRTAP12-2P59991 146 aa6.31□□□□□ -1.4
ARHGEF40-208ENST00000557498 LCE2BO14633 110 aa6.29□□□□□ -1.4
ARHGEF40-208ENST00000557498 K7ERS5 55 aa6.28□□□□□ -1.4
ARHGEF40-208ENST00000557498 MT1BP07438 61 aa6.26□□□□□ -1.41
ARHGEF40-208ENST00000557498 PRO0628Q9UI54 55 aa6.26□□□□□ -1.41
ARHGEF40-208ENST00000557498 PLAC4Q8WY50 150 aa6.24□□□□□ -1.41
ARHGEF40-208ENST00000557498 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
ARHGEF40-208ENST00000557498 PMAIP1Q13794 54 aa6.09□□□□□ -1.43
ARHGEF40-208ENST00000557498 MT1XP80297 61 aa6.03□□□□□ -1.44
ARHGEF40-208ENST00000557498 KRTAP10-5P60370 271 aa6.01□□□□□ -1.45
ARHGEF40-208ENST00000557498 ROMO1P60602 79 aa6.01□□□□□ -1.45
ARHGEF40-208ENST00000557498 KRTAP9-2Q9BYQ4 174 aa6.01□□□□□ -1.45
ARHGEF40-208ENST00000557498 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
ARHGEF40-208ENST00000557498 USH2AO75445 5202 aa6□□□□□ -1.45
ARHGEF40-208ENST00000557498 PRO2289Q9P1D8 64 aa5.98□□□□□ -1.45
ARHGEF40-208ENST00000557498 KRTAP19-6Q3LI70 58 aa5.95□□□□□ -1.46
ARHGEF40-208ENST00000557498 TNP1P09430 55 aa5.85□□□□□ -1.47
ARHGEF40-208ENST00000557498 KRTAP25-1Q3LHN0 102 aa5.84□□□□□ -1.47
ARHGEF40-208ENST00000557498 KTN1-AS1Q86SY8 53 aa5.83□□□□□ -1.48
ARHGEF40-208ENST00000557498 SSPOA2VEC9 5147 aa5.82□□□□□ -1.48
ARHGEF40-208ENST00000557498 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
ARHGEF40-208ENST00000557498 KRTAP10-7P60409 375 aaPredicted RBP5.77□□□□□ -1.49
ARHGEF40-208ENST00000557498 PRAC1Q96KF2 57 aa5.74□□□□□ -1.49
ARHGEF40-208ENST00000557498 FSIP2Q5CZC0 6907 aa5.73□□□□□ -1.49
ARHGEF40-208ENST00000557498 KRTAP10-12P60413 245 aa5.72□□□□□ -1.49
ARHGEF40-208ENST00000557498 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
ARHGEF40-208ENST00000557498 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
ARHGEF40-208ENST00000557498 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
ARHGEF40-208ENST00000557498 FCGBPQ9Y6R7 5405 aaPredicted RBP5.61□□□□□ -1.51
ARHGEF40-208ENST00000557498 KRTAP9-6A0A140TA67 174 aa5.59□□□□□ -1.51
ARHGEF40-208ENST00000557498 KRTAP4-8A0A0G2JLE6 195 aa5.55□□□□□ -1.52
ARHGEF40-208ENST00000557498 KRTAP4-8Q9BYQ9 185 aa5.55□□□□□ -1.52
ARHGEF40-208ENST00000557498 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
ARHGEF40-208ENST00000557498 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
ARHGEF40-208ENST00000557498 KRTAP19-5Q3LI72 72 aa5.42□□□□□ -1.54
ARHGEF40-208ENST00000557498 KMT2DO14686 5537 aa5.4□□□□□ -1.55
ARHGEF40-208ENST00000557498 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
ARHGEF40-208ENST00000557498 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
ARHGEF40-208ENST00000557498 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
ARHGEF40-208ENST00000557498 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.37□□□□□ -1.55
ARHGEF40-208ENST00000557498 MT1EP04732 61 aa5.3□□□□□ -1.56
ARHGEF40-208ENST00000557498 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
ARHGEF40-208ENST00000557498 SPRR2FQ96RM1 72 aa5.26□□□□□ -1.57
ARHGEF40-208ENST00000557498 KRTAP5-9P26371 169 aa5.25□□□□□ -1.57
ARHGEF40-208ENST00000557498 KRTAP6-3Q3LI67 103 aa5.22□□□□□ -1.57
ARHGEF40-208ENST00000557498 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
ARHGEF40-208ENST00000557498 MT1LQ93083 61 aa5.17□□□□□ -1.58
ARHGEF40-208ENST00000557498 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms