RNA–Protein interactions for RNA: ENST00000557013.1

SAMD4A-211, Transcript of sterile alpha motif domain containing 4A, humanhuman

TSL 1 (best)

Gene SAMD4A, Length 3,637 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4A-211ENST00000557013 Q5VSD8 79 aa4.5□□□□□ -1.69
SAMD4A-211ENST00000557013 A0A1B0GVY2 172 aa4.5□□□□□ -1.69
SAMD4A-211ENST00000557013 DNAH17Q9UFH2 4485 aa4.49□□□□□ -1.69
SAMD4A-211ENST00000557013 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
SAMD4A-211ENST00000557013 RPL37P61927 97 aaKnown RBP4.48□□□□□ -1.69
SAMD4A-211ENST00000557013 PKD1P98161 4303 aa4.48□□□□□ -1.69
SAMD4A-211ENST00000557013 COX6B2Q6YFQ2 88 aa4.47□□□□□ -1.69
SAMD4A-211ENST00000557013 DNAH11Q96DT5 4516 aa4.45□□□□□ -1.7
SAMD4A-211ENST00000557013 DYNC1H1Q14204 4646 aaKnown RBP4.45□□□□□ -1.7
SAMD4A-211ENST00000557013 LRP1BQ9NZR2 4599 aa4.44□□□□□ -1.7
SAMD4A-211ENST00000557013 KRTAP1-4P0C5Y4 121 aa4.42□□□□□ -1.7
SAMD4A-211ENST00000557013 DNAH5Q8TE73 4624 aa4.41□□□□□ -1.7
SAMD4A-211ENST00000557013 HERC2O95714 4834 aa4.4□□□□□ -1.7
SAMD4A-211ENST00000557013 C9orf92A6NGG3 77 aa4.39□□□□□ -1.71
SAMD4A-211ENST00000557013 RYR1P21817 5038 aa4.39□□□□□ -1.71
SAMD4A-211ENST00000557013 KRTAP4-5Q9BYR2 181 aa4.39□□□□□ -1.71
SAMD4A-211ENST00000557013 HSPG2P98160 4391 aa4.38□□□□□ -1.71
SAMD4A-211ENST00000557013 PCLOQ9Y6V0 5065 aa4.38□□□□□ -1.71
SAMD4A-211ENST00000557013 KRTAP17-1Q9BYP8 105 aa4.38□□□□□ -1.71
SAMD4A-211ENST00000557013 APOBP04114 4563 aaKnown RBP4.37□□□□□ -1.71
SAMD4A-211ENST00000557013 FAT1Q14517 4588 aa4.36□□□□□ -1.71
SAMD4A-211ENST00000557013 ABCA13Q86UQ4 5058 aa4.35□□□□□ -1.71
SAMD4A-211ENST00000557013 LCE2BO14633 110 aa4.33□□□□□ -1.72
SAMD4A-211ENST00000557013 SEC61BP60468 96 aaKnown RBP4.32□□□□□ -1.72
SAMD4A-211ENST00000557013 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
SAMD4A-211ENST00000557013 S4R3F8 94 aa4.29□□□□□ -1.72
SAMD4A-211ENST00000557013 KRTAP13-4Q3LI77 160 aa4.28□□□□□ -1.72
SAMD4A-211ENST00000557013 MYCBP2O75592 4640 aa4.27□□□□□ -1.73
SAMD4A-211ENST00000557013 RPS29P62273 56 aaKnown RBP4.26□□□□□ -1.73
SAMD4A-211ENST00000557013 LCE2CQ5TA81 110 aa4.26□□□□□ -1.73
SAMD4A-211ENST00000557013 VPS13BQ7Z7G8 4022 aa4.26□□□□□ -1.73
SAMD4A-211ENST00000557013 PLAC4Q8WY50 150 aa4.23□□□□□ -1.73
SAMD4A-211ENST00000557013 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
SAMD4A-211ENST00000557013 HERC1Q15751 4861 aa4.2□□□□□ -1.74
SAMD4A-211ENST00000557013 LRP1Q07954 4544 aaKnown RBP4.19□□□□□ -1.74
SAMD4A-211ENST00000557013 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
SAMD4A-211ENST00000557013 KRTAP10-4P60372 401 aaPredicted RBP4.16□□□□□ -1.74
SAMD4A-211ENST00000557013 KRTAP10-8P60410 259 aa4.14□□□□□ -1.75
SAMD4A-211ENST00000557013 XP32Q5T750 250 aa4.1□□□□□ -1.75
SAMD4A-211ENST00000557013 KRTAP12-1P59990 96 aa4.1□□□□□ -1.75
SAMD4A-211ENST00000557013 LCE2AQ5TA79 106 aaPredicted RBP4.09□□□□□ -1.75
SAMD4A-211ENST00000557013 FAT3Q8TDW7 4589 aa4.09□□□□□ -1.75
SAMD4A-211ENST00000557013 PKHD1L1Q86WI1 4243 aa4.08□□□□□ -1.76
SAMD4A-211ENST00000557013 MT1HL1P0DM35 61 aa4.05□□□□□ -1.76
SAMD4A-211ENST00000557013 CAMK2N1Q7Z7J9 78 aa4.03□□□□□ -1.76
SAMD4A-211ENST00000557013 M0QZ58 72 aa4□□□□□ -1.77
SAMD4A-211ENST00000557013 TNXBP22105 4242 aa4□□□□□ -1.77
SAMD4A-211ENST00000557013 HMCN2Q8NDA2 5059 aa3.98□□□□□ -1.77
SAMD4A-211ENST00000557013 UBR4Q5T4S7 5183 aa3.98□□□□□ -1.77
SAMD4A-211ENST00000557013 LRP2P98164 4655 aa3.97□□□□□ -1.77
SAMD4A-211ENST00000557013 R4GN34 69 aa3.96□□□□□ -1.78
SAMD4A-211ENST00000557013 M0R2T5 61 aa3.92□□□□□ -1.78
SAMD4A-211ENST00000557013 LPAP08519 4548 aa3.91□□□□□ -1.78
SAMD4A-211ENST00000557013 RNF213Q63HN8 5207 aa3.9□□□□□ -1.79
SAMD4A-211ENST00000557013 PRO2289Q9P1D8 64 aa3.86□□□□□ -1.79
SAMD4A-211ENST00000557013 LORP23490 312 aaPredicted RBP3.85□□□□□ -1.79
SAMD4A-211ENST00000557013 PP632Q6XCG6 107 aa3.81□□□□□ -1.8
SAMD4A-211ENST00000557013 MUC2Q02817 5179 aa3.8□□□□□ -1.8
SAMD4A-211ENST00000557013 FSIP2Q5CZC0 6907 aa3.69□□□□□ -1.82
SAMD4A-211ENST00000557013 TNP1P09430 55 aa3.66□□□□□ -1.82
SAMD4A-211ENST00000557013 FAT4Q6V0I7 4981 aa3.66□□□□□ -1.82
SAMD4A-211ENST00000557013 INE1O15225 51 aa3.65□□□□□ -1.82
SAMD4A-211ENST00000557013 KRTAP4-1Q9BYQ7 146 aa3.62□□□□□ -1.83
SAMD4A-211ENST00000557013 MUC17Q685J3 4493 aa3.58□□□□□ -1.84
SAMD4A-211ENST00000557013 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
SAMD4A-211ENST00000557013 KRTAP23-1A1A580 65 aa3.51□□□□□ -1.85
SAMD4A-211ENST00000557013 KRTAP10-10P60014 251 aa3.51□□□□□ -1.85
SAMD4A-211ENST00000557013 KRTAP19-2Q3LHN2 52 aa3.47□□□□□ -1.85
SAMD4A-211ENST00000557013 MT1HP80294 61 aa3.45□□□□□ -1.86
SAMD4A-211ENST00000557013 KRTAP9-2Q9BYQ4 174 aa3.43□□□□□ -1.86
SAMD4A-211ENST00000557013 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
SAMD4A-211ENST00000557013 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
SAMD4A-211ENST00000557013 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
SAMD4A-211ENST00000557013 SPRR2GQ9BYE4 73 aa3.28□□□□□ -1.88
SAMD4A-211ENST00000557013 CRCT1Q9UGL9 99 aa3.28□□□□□ -1.88
SAMD4A-211ENST00000557013 KRTAP19-1Q8IUB9 90 aa3.27□□□□□ -1.89
SAMD4A-211ENST00000557013 KRTAP9-8Q9BYQ0 159 aa3.25□□□□□ -1.89
SAMD4A-211ENST00000557013 USH2AO75445 5202 aa3.24□□□□□ -1.89
SAMD4A-211ENST00000557013 MT2AP02795 61 aa3.23□□□□□ -1.89
SAMD4A-211ENST00000557013 MT1FP04733 61 aa3.22□□□□□ -1.89
SAMD4A-211ENST00000557013 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
SAMD4A-211ENST00000557013 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
SAMD4A-211ENST00000557013 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
SAMD4A-211ENST00000557013 SSPOA2VEC9 5147 aa3.15□□□□□ -1.9
SAMD4A-211ENST00000557013 KRTAP9-3Q9BYQ3 159 aa3.14□□□□□ -1.91
SAMD4A-211ENST00000557013 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
SAMD4A-211ENST00000557013 KRTAP10-5P60370 271 aa3.11□□□□□ -1.91
SAMD4A-211ENST00000557013 LCE4AQ5TA78 99 aa3.11□□□□□ -1.91
SAMD4A-211ENST00000557013 MT1XP80297 61 aa3.1□□□□□ -1.91
SAMD4A-211ENST00000557013 KRTAP19-8Q3LI54 63 aa3.09□□□□□ -1.91
SAMD4A-211ENST00000557013 MT1BP07438 61 aa3.08□□□□□ -1.92
SAMD4A-211ENST00000557013 FCGBPQ9Y6R7 5405 aaPredicted RBP3.07□□□□□ -1.92
SAMD4A-211ENST00000557013 KRTAP10-7P60409 375 aaPredicted RBP3.06□□□□□ -1.92
SAMD4A-211ENST00000557013 LOC100996750A0A140TA64 210 aa3.04□□□□□ -1.92
SAMD4A-211ENST00000557013 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
SAMD4A-211ENST00000557013 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.92
SAMD4A-211ENST00000557013 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
SAMD4A-211ENST00000557013 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
SAMD4A-211ENST00000557013 KRTAP9-7A8MTY7 169 aa3.01□□□□□ -1.93
SAMD4A-211ENST00000557013 KRTAP19-6Q3LI70 58 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms