RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 SNURFQ9Y675 71 aa6.58□□□□□ -1.36
PSEN1-219ENST00000556951 LOC101927531A0A1B0GV80 90 aa6.56□□□□□ -1.36
PSEN1-219ENST00000556951 ATP11AUNQ6ZP68 121 aa6.56□□□□□ -1.36
PSEN1-219ENST00000556951 NDUFC1O43677 76 aa6.55□□□□□ -1.36
PSEN1-219ENST00000556951 KRTAP19-6Q3LI70 58 aa6.55□□□□□ -1.36
PSEN1-219ENST00000556951 IGKV2-30P06310 120 aa6.52□□□□□ -1.37
PSEN1-219ENST00000556951 CYP4F30PQ9H0H9 118 aa6.51□□□□□ -1.37
PSEN1-219ENST00000556951 CYSTM1Q9H1C7 97 aa6.51□□□□□ -1.37
PSEN1-219ENST00000556951 GPR98Q8WXG9 6306 aa6.49□□□□□ -1.37
PSEN1-219ENST00000556951 KMT2DO14686 5537 aa6.48□□□□□ -1.37
PSEN1-219ENST00000556951 IGKV2D-30A0A075B6S6 120 aa6.48□□□□□ -1.37
PSEN1-219ENST00000556951 H7BZZ5 65 aa6.48□□□□□ -1.37
PSEN1-219ENST00000556951 MT2AP02795 61 aa6.47□□□□□ -1.37
PSEN1-219ENST00000556951 C7orf65Q6ZTY9 151 aa6.47□□□□□ -1.37
PSEN1-219ENST00000556951 KRTAP2-3P0C7H8 128 aa6.45□□□□□ -1.38
PSEN1-219ENST00000556951 SPINK7P58062 85 aa6.45□□□□□ -1.38
PSEN1-219ENST00000556951 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
PSEN1-219ENST00000556951 KRTAP2-4Q9BYR9 128 aa6.45□□□□□ -1.38
PSEN1-219ENST00000556951 TMEM258P61165 79 aa6.43□□□□□ -1.38
PSEN1-219ENST00000556951 MDN1Q9NU22 5596 aa6.42□□□□□ -1.38
PSEN1-219ENST00000556951 MT1FP04733 61 aa6.41□□□□□ -1.38
PSEN1-219ENST00000556951 SPANXA2-OT1Q8N9U9 137 aa6.41□□□□□ -1.38
PSEN1-219ENST00000556951 HRES1P13985 223 aa6.39□□□□□ -1.39
PSEN1-219ENST00000556951 ATP5EP56381 51 aaPredicted RBP6.39□□□□□ -1.39
PSEN1-219ENST00000556951 FAM236DA0A1B0GTK5 79 aa6.38□□□□□ -1.39
PSEN1-219ENST00000556951 FAM236CP0DP71 79 aa6.38□□□□□ -1.39
PSEN1-219ENST00000556951 KRTAP10-10P60014 251 aa6.31□□□□□ -1.4
PSEN1-219ENST00000556951 C4orf26Q17RF5 130 aa6.31□□□□□ -1.4
PSEN1-219ENST00000556951 DMAC1Q96GE9 116 aa6.28□□□□□ -1.4
PSEN1-219ENST00000556951 A8MUN3 132 aa6.27□□□□□ -1.41
PSEN1-219ENST00000556951 ACYP2P14621 99 aa6.27□□□□□ -1.41
PSEN1-219ENST00000556951 SERP1Q9Y6X1 66 aa6.25□□□□□ -1.41
PSEN1-219ENST00000556951 MPLKIPQ8TAP9 179 aa6.24□□□□□ -1.41
PSEN1-219ENST00000556951 KRTAP3-1Q9BYR8 98 aa6.23□□□□□ -1.41
PSEN1-219ENST00000556951 RBM12B-AS1Q9P1G2 102 aa6.23□□□□□ -1.41
PSEN1-219ENST00000556951 RPS28P62857 69 aaKnown RBP6.22□□□□□ -1.41
PSEN1-219ENST00000556951 COA5Q86WW8 74 aa6.19□□□□□ -1.42
PSEN1-219ENST00000556951 KRTAP5-9P26371 169 aa6.18□□□□□ -1.42
PSEN1-219ENST00000556951 KRTAP2-2Q9BYT5 123 aa6.18□□□□□ -1.42
PSEN1-219ENST00000556951 KRTAP2-1Q9BYU5 128 aa6.18□□□□□ -1.42
PSEN1-219ENST00000556951 H1FX-AS1Q4G0G2 97 aa6.16□□□□□ -1.42
PSEN1-219ENST00000556951 CHKB-CPT1BH3BT56 60 aa6.15□□□□□ -1.42
PSEN1-219ENST00000556951 SMIM26A0A096LP01 95 aa6.08□□□□□ -1.44
PSEN1-219ENST00000556951 SPTSSBQ8NFR3 76 aa6.08□□□□□ -1.44
PSEN1-219ENST00000556951 S4R3F8 94 aa6.08□□□□□ -1.44
PSEN1-219ENST00000556951 LCA10Q71F78 164 aa6.03□□□□□ -1.44
PSEN1-219ENST00000556951 V9GYY9 64 aa5.99□□□□□ -1.45
PSEN1-219ENST00000556951 Q1T7F1 81 aa5.98□□□□□ -1.45
PSEN1-219ENST00000556951 CSAG1Q6PB30 78 aa5.97□□□□□ -1.45
PSEN1-219ENST00000556951 LINC01558Q9Y6Z2 57 aa5.95□□□□□ -1.46
PSEN1-219ENST00000556951 SPRR2EP22531 72 aa5.89□□□□□ -1.47
PSEN1-219ENST00000556951 SPRR2BP35325 72 aa5.89□□□□□ -1.47
PSEN1-219ENST00000556951 SPRR2AP35326 72 aa5.89□□□□□ -1.47
PSEN1-219ENST00000556951 SEC61GP60059 68 aa5.89□□□□□ -1.47
PSEN1-219ENST00000556951 PRR15LQ9BU68 103 aa5.88□□□□□ -1.47
PSEN1-219ENST00000556951 A0A1B0GU69 56 aa5.87□□□□□ -1.47
PSEN1-219ENST00000556951 A6NN06 94 aa5.84□□□□□ -1.47
PSEN1-219ENST00000556951 PSPHP1O15172 72 aa5.84□□□□□ -1.47
PSEN1-219ENST00000556951 H0YAA0 97 aa5.83□□□□□ -1.48
PSEN1-219ENST00000556951 MT1BP07438 61 aa5.79□□□□□ -1.48
PSEN1-219ENST00000556951 Q5VV11 94 aa5.79□□□□□ -1.48
PSEN1-219ENST00000556951 ADM2Q7Z4H4 148 aa5.79□□□□□ -1.48
PSEN1-219ENST00000556951 A0A1B0GU33 70 aa5.73□□□□□ -1.49
PSEN1-219ENST00000556951 P0C880 135 aa5.73□□□□□ -1.49
PSEN1-219ENST00000556951 KRTAP10-5P60370 271 aa5.72□□□□□ -1.49
PSEN1-219ENST00000556951 SPRR2FQ96RM1 72 aa5.72□□□□□ -1.49
PSEN1-219ENST00000556951 SPRR2DP22532 72 aa5.71□□□□□ -1.5
PSEN1-219ENST00000556951 UQCR11O14957 56 aa5.69□□□□□ -1.5
PSEN1-219ENST00000556951 LCE1AQ5T7P2 110 aa5.69□□□□□ -1.5
PSEN1-219ENST00000556951 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
PSEN1-219ENST00000556951 A6NED7 52 aa5.68□□□□□ -1.5
PSEN1-219ENST00000556951 KRTAP19-8Q3LI54 63 aa5.67□□□□□ -1.5
PSEN1-219ENST00000556951 LCE3BQ5TA77 95 aa5.65□□□□□ -1.5
PSEN1-219ENST00000556951 M0QZ58 72 aa5.63□□□□□ -1.51
PSEN1-219ENST00000556951 CRIPTQ9P021 101 aa5.63□□□□□ -1.51
PSEN1-219ENST00000556951 MIR22HGQ0VDD5 57 aa5.62□□□□□ -1.51
PSEN1-219ENST00000556951 SPATA8Q6RVD6 105 aa5.61□□□□□ -1.51
PSEN1-219ENST00000556951 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
PSEN1-219ENST00000556951 R4GN34 69 aa5.59□□□□□ -1.51
PSEN1-219ENST00000556951 KRTAP13-4Q3LI77 160 aa5.57□□□□□ -1.52
PSEN1-219ENST00000556951 CDC42SE1Q9NRR8 79 aa5.57□□□□□ -1.52
PSEN1-219ENST00000556951 AHNAK2Q8IVF2 5795 aa5.55□□□□□ -1.52
PSEN1-219ENST00000556951 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
PSEN1-219ENST00000556951 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
PSEN1-219ENST00000556951 HMCN1Q96RW7 5635 aa5.51□□□□□ -1.53
PSEN1-219ENST00000556951 A8MU10 97 aa5.5□□□□□ -1.53
PSEN1-219ENST00000556951 A0A0D9SG42 100 aa5.49□□□□□ -1.53
PSEN1-219ENST00000556951 KRTAP5-10Q6L8G5 202 aa5.47□□□□□ -1.53
PSEN1-219ENST00000556951 LINC01554Q52M75 96 aa5.46□□□□□ -1.54
PSEN1-219ENST00000556951 PRO0628Q9UI54 55 aa5.42□□□□□ -1.54
PSEN1-219ENST00000556951 K7ERS5 55 aa5.41□□□□□ -1.54
PSEN1-219ENST00000556951 KRTAP5-7Q6L8G8 165 aa5.4□□□□□ -1.54
PSEN1-219ENST00000556951 KRTAP12-1P59990 96 aa5.39□□□□□ -1.55
PSEN1-219ENST00000556951 SPINT4Q6UDR6 99 aa5.38□□□□□ -1.55
PSEN1-219ENST00000556951 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
PSEN1-219ENST00000556951 KRTAP8-1Q8IUC2 63 aa5.35□□□□□ -1.55
PSEN1-219ENST00000556951 PLAC4Q8WY50 150 aa5.32□□□□□ -1.56
PSEN1-219ENST00000556951 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
PSEN1-219ENST00000556951 MT1XP80297 61 aa5.29□□□□□ -1.56
PSEN1-219ENST00000556951 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms