RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 C20orf166-AS1Q96NR2 134 aa2.82□□□□□ -1.96
ATXN3-244ENST00000556898 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
ATXN3-244ENST00000556898 FAM236AA0A1B0GUQ0 79 aa2.8□□□□□ -1.96
ATXN3-244ENST00000556898 FAM236BA0A1B0GV22 79 aa2.8□□□□□ -1.96
ATXN3-244ENST00000556898 PCOTHQ58A44 107 aa2.8□□□□□ -1.96
ATXN3-244ENST00000556898 Q5W150 140 aa2.8□□□□□ -1.96
ATXN3-244ENST00000556898 KRTAP4-1Q9BYQ7 146 aa2.8□□□□□ -1.96
ATXN3-244ENST00000556898 IMUPQ9GZP8 106 aa2.79□□□□□ -1.96
ATXN3-244ENST00000556898 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
ATXN3-244ENST00000556898 ZCCHC13Q8WW36 166 aaKnown RBP2.78□□□□□ -1.96
ATXN3-244ENST00000556898 OCR1Q9BZK8 76 aa2.77□□□□□ -1.97
ATXN3-244ENST00000556898 ATP11AUNQ6ZP68 121 aa2.76□□□□□ -1.97
ATXN3-244ENST00000556898 PRAC1Q96KF2 57 aa2.76□□□□□ -1.97
ATXN3-244ENST00000556898 H0Y9P7 68 aa2.74□□□□□ -1.97
ATXN3-244ENST00000556898 UQCRQO14949 82 aa2.74□□□□□ -1.97
ATXN3-244ENST00000556898 TRAV7A0A075B6U4 112 aa2.73□□□□□ -1.97
ATXN3-244ENST00000556898 ATOX1O00244 68 aa2.73□□□□□ -1.97
ATXN3-244ENST00000556898 SPINK7P58062 85 aa2.73□□□□□ -1.97
ATXN3-244ENST00000556898 TP53AIP1Q9HCN2 124 aa2.73□□□□□ -1.97
ATXN3-244ENST00000556898 TRAV22A0A0B4J277 110 aa2.72□□□□□ -1.97
ATXN3-244ENST00000556898 LINC00208Q96KT6 92 aa2.72□□□□□ -1.97
ATXN3-244ENST00000556898 HRES1P13985 223 aa2.71□□□□□ -1.98
ATXN3-244ENST00000556898 MT1HP80294 61 aa2.71□□□□□ -1.98
ATXN3-244ENST00000556898 KLKP1Q107X0 134 aa2.71□□□□□ -1.98
ATXN3-244ENST00000556898 SERP2Q8N6R1 65 aa2.71□□□□□ -1.98
ATXN3-244ENST00000556898 SNURFQ9Y675 71 aa2.71□□□□□ -1.98
ATXN3-244ENST00000556898 MP68P56378 58 aa2.7□□□□□ -1.98
ATXN3-244ENST00000556898 C5orf47Q569G3 176 aa2.7□□□□□ -1.98
ATXN3-244ENST00000556898 LCE3CQ5T5A8 94 aa2.7□□□□□ -1.98
ATXN3-244ENST00000556898 C1orf64Q8NEQ6 169 aa2.7□□□□□ -1.98
ATXN3-244ENST00000556898 NDUFAF8A1L188 74 aa2.69□□□□□ -1.98
ATXN3-244ENST00000556898 CCDC179H3BU77 68 aa2.69□□□□□ -1.98
ATXN3-244ENST00000556898 COX7CP15954 63 aa2.69□□□□□ -1.98
ATXN3-244ENST00000556898 C7orf65Q6ZTY9 151 aa2.69□□□□□ -1.98
ATXN3-244ENST00000556898 C20orf197Q8N268 126 aa2.69□□□□□ -1.98
ATXN3-244ENST00000556898 SMIM20Q8N5G0 67 aa2.69□□□□□ -1.98
ATXN3-244ENST00000556898 ANAPC13Q9BS18 74 aa2.69□□□□□ -1.98
ATXN3-244ENST00000556898 CYP4F30PQ9H0H9 118 aa2.69□□□□□ -1.98
ATXN3-244ENST00000556898 CYSTM1Q9H1C7 97 aa2.69□□□□□ -1.98
ATXN3-244ENST00000556898 LOC101927531A0A1B0GV80 90 aa2.68□□□□□ -1.98
ATXN3-244ENST00000556898 KRTAP19-2Q3LHN2 52 aa2.68□□□□□ -1.98
ATXN3-244ENST00000556898 C4orf26Q17RF5 130 aa2.67□□□□□ -1.98
ATXN3-244ENST00000556898 M0R2T5 61 aa2.66□□□□□ -1.98
ATXN3-244ENST00000556898 H3BPC8 53 aa2.65□□□□□ -1.99
ATXN3-244ENST00000556898 KRTAP4-3Q9BYR4 195 aa2.64□□□□□ -1.99
ATXN3-244ENST00000556898 FAM236DA0A1B0GTK5 79 aa2.63□□□□□ -1.99
ATXN3-244ENST00000556898 FAM236CP0DP71 79 aa2.63□□□□□ -1.99
ATXN3-244ENST00000556898 COX6B2Q6YFQ2 88 aa2.63□□□□□ -1.99
ATXN3-244ENST00000556898 RBM12B-AS1Q9P1G2 102 aa2.62□□□□□ -1.99
ATXN3-244ENST00000556898 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
ATXN3-244ENST00000556898 H7BZZ5 65 aa2.61□□□□□ -1.99
ATXN3-244ENST00000556898 H1FX-AS1Q4G0G2 97 aa2.59□□□□□ -1.99
ATXN3-244ENST00000556898 SSPOA2VEC9 5147 aa2.58□□□□□ -2
ATXN3-244ENST00000556898 RPS28P62857 69 aaKnown RBP2.57□□□□□ -2
ATXN3-244ENST00000556898 DMAC1Q96GE9 116 aa2.57□□□□□ -2
ATXN3-244ENST00000556898 NDUFC1O43677 76 aa2.56□□□□□ -2
ATXN3-244ENST00000556898 LCA10Q71F78 164 aa2.56□□□□□ -2
ATXN3-244ENST00000556898 SPANXA2-OT1Q8N9U9 137 aa2.56□□□□□ -2
ATXN3-244ENST00000556898 S4R3F8 94 aa2.56□□□□□ -2
ATXN3-244ENST00000556898 USH2AO75445 5202 aa2.55□□□□□ -2
ATXN3-244ENST00000556898 SEC61GP60059 68 aa2.55□□□□□ -2
ATXN3-244ENST00000556898 FCGBPQ9Y6R7 5405 aaPredicted RBP2.54□□□□□ -2
ATXN3-244ENST00000556898 A8MUN3 132 aa2.54□□□□□ -2
ATXN3-244ENST00000556898 ACYP2P14621 99 aa2.53□□□□□ -2
ATXN3-244ENST00000556898 TMEM258P61165 79 aa2.53□□□□□ -2
ATXN3-244ENST00000556898 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
ATXN3-244ENST00000556898 COA5Q86WW8 74 aa2.53□□□□□ -2
ATXN3-244ENST00000556898 CHKB-CPT1BH3BT56 60 aa2.5□□□□□ -2.01
ATXN3-244ENST00000556898 ATP5EP56381 51 aaPredicted RBP2.49□□□□□ -2.01
ATXN3-244ENST00000556898 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
ATXN3-244ENST00000556898 CSAG1Q6PB30 78 aa2.49□□□□□ -2.01
ATXN3-244ENST00000556898 MT2AP02795 61 aa2.48□□□□□ -2.01
ATXN3-244ENST00000556898 MT1FP04733 61 aa2.47□□□□□ -2.01
ATXN3-244ENST00000556898 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
ATXN3-244ENST00000556898 SYNE2Q8WXH0 6885 aaKnown RBP2.46□□□□□ -2.02
ATXN3-244ENST00000556898 KRTAP19-6Q3LI70 58 aa2.46□□□□□ -2.02
ATXN3-244ENST00000556898 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
ATXN3-244ENST00000556898 ADM2Q7Z4H4 148 aa2.45□□□□□ -2.02
ATXN3-244ENST00000556898 SERP1Q9Y6X1 66 aa2.45□□□□□ -2.02
ATXN3-244ENST00000556898 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
ATXN3-244ENST00000556898 KRTAP10-10P60014 251 aa2.44□□□□□ -2.02
ATXN3-244ENST00000556898 P0C880 135 aa2.43□□□□□ -2.02
ATXN3-244ENST00000556898 SPTSSBQ8NFR3 76 aa2.43□□□□□ -2.02
ATXN3-244ENST00000556898 SMIM26A0A096LP01 95 aa2.42□□□□□ -2.02
ATXN3-244ENST00000556898 H0YAA0 97 aa2.4□□□□□ -2.03
ATXN3-244ENST00000556898 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
ATXN3-244ENST00000556898 LINC01558Q9Y6Z2 57 aa2.39□□□□□ -2.03
ATXN3-244ENST00000556898 A0A1B0GU69 56 aa2.37□□□□□ -2.03
ATXN3-244ENST00000556898 KRTAP13-4Q3LI77 160 aa2.37□□□□□ -2.03
ATXN3-244ENST00000556898 PRR15LQ9BU68 103 aa2.37□□□□□ -2.03
ATXN3-244ENST00000556898 NEBP20929 6669 aa2.37□□□□□ -2.03
ATXN3-244ENST00000556898 PRO0628Q9UI54 55 aa2.36□□□□□ -2.03
ATXN3-244ENST00000556898 V9GYY9 64 aa2.36□□□□□ -2.03
ATXN3-244ENST00000556898 A8MU10 97 aa2.35□□□□□ -2.03
ATXN3-244ENST00000556898 M0QZ58 72 aa2.35□□□□□ -2.03
ATXN3-244ENST00000556898 PSPHP1O15172 72 aa2.35□□□□□ -2.03
ATXN3-244ENST00000556898 Q1T7F1 81 aa2.35□□□□□ -2.03
ATXN3-244ENST00000556898 SPATA8Q6RVD6 105 aa2.35□□□□□ -2.03
ATXN3-244ENST00000556898 A0A1B0GU33 70 aa2.33□□□□□ -2.04
ATXN3-244ENST00000556898 KRTAP12-2P59991 146 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms