RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 DOPEY1Q5JWR5 2465 aa0.79□□□□□ -2.28
KTN1-224ENST00000556631 ZFYVE26Q68DK2 2539 aa0.79□□□□□ -2.28
KTN1-224ENST00000556631 RIF1Q5UIP0 2472 aaKnown RBP0.79□□□□□ -2.28
KTN1-224ENST00000556631 HECTD1Q9ULT8 2610 aa0.78□□□□□ -2.28
KTN1-224ENST00000556631 DEFB4AO15263 64 aa0.78□□□□□ -2.28
KTN1-224ENST00000556631 KRTAP12-3P60328 96 aa0.78□□□□□ -2.29
KTN1-224ENST00000556631 PIEZO1Q92508 2521 aa0.78□□□□□ -2.29
KTN1-224ENST00000556631 KRTAP5-7Q6L8G8 165 aa0.77□□□□□ -2.29
KTN1-224ENST00000556631 HELZ2Q9BYK8 2649 aaKnown RBP0.77□□□□□ -2.29
KTN1-224ENST00000556631 DNAH9Q9NYC9 4486 aa0.77□□□□□ -2.29
KTN1-224ENST00000556631 RPS29P62273 56 aaKnown RBP0.77□□□□□ -2.29
KTN1-224ENST00000556631 FBN2P35556 2912 aa0.77□□□□□ -2.29
KTN1-224ENST00000556631 SACSQ9NZJ4 4579 aa0.77□□□□□ -2.29
KTN1-224ENST00000556631 IGF2RP11717 2491 aa0.76□□□□□ -2.29
KTN1-224ENST00000556631 LRRK2Q5S007 2527 aa0.75□□□□□ -2.29
KTN1-224ENST00000556631 KRTAP10-9P60411 292 aa0.75□□□□□ -2.29
KTN1-224ENST00000556631 EPPK1P58107 5090 aaKnown RBP0.75□□□□□ -2.29
KTN1-224ENST00000556631 KRTAP2-2Q9BYT5 123 aa0.75□□□□□ -2.29
KTN1-224ENST00000556631 TENM4Q6N022 2769 aa0.74□□□□□ -2.29
KTN1-224ENST00000556631 DNAH2Q9P225 4427 aa0.74□□□□□ -2.29
KTN1-224ENST00000556631 POLQO75417 2590 aa0.74□□□□□ -2.29
KTN1-224ENST00000556631 DNAH17Q9UFH2 4485 aa0.74□□□□□ -2.29
KTN1-224ENST00000556631 DSPP15924 2871 aaKnown RBP0.74□□□□□ -2.29
KTN1-224ENST00000556631 ANKHD1Q8IWZ3 2542 aaKnown RBP0.74□□□□□ -2.29
KTN1-224ENST00000556631 CFAP46Q8IYW2 2715 aa0.73□□□□□ -2.29
KTN1-224ENST00000556631 DNAH11Q96DT5 4516 aa0.73□□□□□ -2.29
KTN1-224ENST00000556631 A0A1B0GVY2 172 aa0.73□□□□□ -2.29
KTN1-224ENST00000556631 ABCA13Q86UQ4 5058 aa0.73□□□□□ -2.29
KTN1-224ENST00000556631 KRTAP10-4P60372 401 aaPredicted RBP0.73□□□□□ -2.29
KTN1-224ENST00000556631 KRTAP10-1P60331 282 aa0.73□□□□□ -2.29
KTN1-224ENST00000556631 SSPOA2VEC9 5147 aa0.73□□□□□ -2.29
KTN1-224ENST00000556631 ACACBO00763 2458 aa0.73□□□□□ -2.29
KTN1-224ENST00000556631 TLN2Q9Y4G6 2542 aa0.72□□□□□ -2.29
KTN1-224ENST00000556631 KRTAP10-6P60371 365 aaPredicted RBP0.72□□□□□ -2.29
KTN1-224ENST00000556631 FLGP20930 4061 aaPredicted RBP0.72□□□□□ -2.29
KTN1-224ENST00000556631 MYO18BQ8IUG5 2567 aa0.72□□□□□ -2.29
KTN1-224ENST00000556631 MYO9AB2RTY4 2548 aa0.72□□□□□ -2.29
KTN1-224ENST00000556631 DNAH10Q8IVF4 4471 aa0.71□□□□□ -2.3
KTN1-224ENST00000556631 KRTAP10-12P60413 245 aa0.71□□□□□ -2.3
KTN1-224ENST00000556631 LCE3CQ5T5A8 94 aa0.71□□□□□ -2.3
KTN1-224ENST00000556631 CHD6Q8TD26 2715 aa0.71□□□□□ -2.3
KTN1-224ENST00000556631 NEBP20929 6669 aa0.71□□□□□ -2.3
KTN1-224ENST00000556631 LRBAP50851 2863 aa0.71□□□□□ -2.3
KTN1-224ENST00000556631 KRTAP10-3P60369 221 aa0.71□□□□□ -2.3
KTN1-224ENST00000556631 EPG5Q9HCE0 2579 aa0.7□□□□□ -2.3
KTN1-224ENST00000556631 PDZD2O15018 2839 aa0.7□□□□□ -2.3
KTN1-224ENST00000556631 SPRR5A0A1B0GTR4 108 aa0.7□□□□□ -2.3
KTN1-224ENST00000556631 KRTAP4-3Q9BYR4 195 aa0.7□□□□□ -2.3
KTN1-224ENST00000556631 DNAH8Q96JB1 4490 aa0.7□□□□□ -2.3
KTN1-224ENST00000556631 NOTCH2Q04721 2471 aa0.7□□□□□ -2.3
KTN1-224ENST00000556631 PIEZO2Q9H5I5 2752 aa0.69□□□□□ -2.3
KTN1-224ENST00000556631 MUC19Q7Z5P9 8384 aa0.69□□□□□ -2.3
KTN1-224ENST00000556631 NOTCH1P46531 2555 aa0.69□□□□□ -2.3
KTN1-224ENST00000556631 KRTAP6-3Q3LI67 103 aa0.69□□□□□ -2.3
KTN1-224ENST00000556631 HERC2O95714 4834 aa0.69□□□□□ -2.3
KTN1-224ENST00000556631 BDP1A6H8Y1 2624 aa0.68□□□□□ -2.3
KTN1-224ENST00000556631 KIAA1109Q2LD37 5005 aa0.68□□□□□ -2.3
KTN1-224ENST00000556631 LCE1EQ5T753 118 aa0.68□□□□□ -2.3
KTN1-224ENST00000556631 KRTAP10-10P60014 251 aa0.68□□□□□ -2.3
KTN1-224ENST00000556631 SPTBN4Q9H254 2564 aa0.68□□□□□ -2.3
KTN1-224ENST00000556631 MUC5ACP98088 5654 aa0.67□□□□□ -2.3
KTN1-224ENST00000556631 STARD9Q9P2P6 4700 aa0.67□□□□□ -2.3
KTN1-224ENST00000556631 PLECQ15149 4684 aaKnown RBP0.67□□□□□ -2.3
KTN1-224ENST00000556631 KRTAP10-5P60370 271 aa0.66□□□□□ -2.3
KTN1-224ENST00000556631 KRTAP12-4P60329 112 aa0.66□□□□□ -2.3
KTN1-224ENST00000556631 HERC1Q15751 4861 aa0.66□□□□□ -2.3
KTN1-224ENST00000556631 DYNC1H1Q14204 4646 aaKnown RBP0.66□□□□□ -2.3
KTN1-224ENST00000556631 NF1P21359 2839 aa0.65□□□□□ -2.3
KTN1-224ENST00000556631 LCE3EQ5T5B0 92 aa0.65□□□□□ -2.3
KTN1-224ENST00000556631 SETD2Q9BYW2 2564 aaPredicted RBP0.65□□□□□ -2.31
KTN1-224ENST00000556631 MGAM2Q2M2H8 2515 aa0.65□□□□□ -2.31
KTN1-224ENST00000556631 ZANQ9Y493 2812 aa0.65□□□□□ -2.31
KTN1-224ENST00000556631 SYNE2Q8WXH0 6885 aaKnown RBP0.65□□□□□ -2.31
KTN1-224ENST00000556631 APCP25054 2843 aa0.65□□□□□ -2.31
KTN1-224ENST00000556631 UBR5O95071 2799 aaPredicted RBP0.64□□□□□ -2.31
KTN1-224ENST00000556631 TENM2Q9NT68 2774 aa0.64□□□□□ -2.31
KTN1-224ENST00000556631 MAST4O15021 2626 aa0.64□□□□□ -2.31
KTN1-224ENST00000556631 LRP2P98164 4655 aa0.64□□□□□ -2.31
KTN1-224ENST00000556631 PKD1L1Q8TDX9 2849 aa0.64□□□□□ -2.31
KTN1-224ENST00000556631 DNAH5Q8TE73 4624 aa0.64□□□□□ -2.31
KTN1-224ENST00000556631 FASNP49327 2511 aaKnown RBP0.63□□□□□ -2.31
KTN1-224ENST00000556631 USP9XQ93008 2570 aaPredicted RBP0.63□□□□□ -2.31
KTN1-224ENST00000556631 AKAP13Q12802 2813 aa0.63□□□□□ -2.31
KTN1-224ENST00000556631 ATRQ13535 2644 aa0.63□□□□□ -2.31
KTN1-224ENST00000556631 HMCN2Q8NDA2 5059 aa0.63□□□□□ -2.31
KTN1-224ENST00000556631 HRNRQ86YZ3 2850 aaPredicted RBP0.62□□□□□ -2.31
KTN1-224ENST00000556631 APOBP04114 4563 aaKnown RBP0.62□□□□□ -2.31
KTN1-224ENST00000556631 KRTAP2-3P0C7H8 128 aa0.61□□□□□ -2.31
KTN1-224ENST00000556631 LCE3DQ9BYE3 92 aa0.61□□□□□ -2.31
KTN1-224ENST00000556631 KRTAP2-4Q9BYR9 128 aa0.61□□□□□ -2.31
KTN1-224ENST00000556631 TACC2O95359 2948 aa0.61□□□□□ -2.31
KTN1-224ENST00000556631 USP9YO00507 2555 aaPredicted RBP0.61□□□□□ -2.31
KTN1-224ENST00000556631 STAB1Q9NY15 2570 aa0.61□□□□□ -2.31
KTN1-224ENST00000556631 FAT1Q14517 4588 aa0.61□□□□□ -2.31
KTN1-224ENST00000556631 FAT4Q6V0I7 4981 aa0.61□□□□□ -2.31
KTN1-224ENST00000556631 LRP1Q07954 4544 aaKnown RBP0.61□□□□□ -2.31
KTN1-224ENST00000556631 MDN1Q9NU22 5596 aa0.61□□□□□ -2.31
KTN1-224ENST00000556631 ZNF292O60281 2723 aa0.6□□□□□ -2.31
KTN1-224ENST00000556631 LCE3AQ5TA76 89 aa0.6□□□□□ -2.31
KTN1-224ENST00000556631 UTP20O75691 2785 aaKnown RBP0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms