RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 POTEDQ86YR6 584 aa4.12□□□□□ -1.75
KTN1-224ENST00000556631 AEBP2Q6ZN18 517 aaPredicted RBP3.95□□□□□ -1.78
KTN1-224ENST00000556631 CHIC1Q5VXU3 224 aa3.85□□□□□ -1.79
KTN1-224ENST00000556631 PHF23Q9BUL5 403 aaPredicted RBP3.59□□□□□ -1.84
KTN1-224ENST00000556631 EHMT2Q96KQ7 1210 aa3.37□□□□□ -1.87
KTN1-224ENST00000556631 SLC24A1O60721 1099 aa3.34□□□□□ -1.87
KTN1-224ENST00000556631 KRTAP17-1Q9BYP8 105 aa3.34□□□□□ -1.87
KTN1-224ENST00000556631 RANGAP1P46060 587 aaPredicted RBP3.28□□□□□ -1.88
KTN1-224ENST00000556631 MYT1Q01538 1121 aa3.28□□□□□ -1.88
KTN1-224ENST00000556631 DCAF8L2P0C7V8 631 aa3.19□□□□□ -1.9
KTN1-224ENST00000556631 PELP1Q8IZL8 1130 aaKnown RBP3.17□□□□□ -1.9
KTN1-224ENST00000556631 AMER1Q5JTC6 1135 aaPredicted RBP3.14□□□□□ -1.91
KTN1-224ENST00000556631 TTBK1Q5TCY1 1321 aaPredicted RBP3.13□□□□□ -1.91
KTN1-224ENST00000556631 ERICH6Q7L0X2 663 aa3.13□□□□□ -1.91
KTN1-224ENST00000556631 ADRA2BP18089 450 aa3.12□□□□□ -1.91
KTN1-224ENST00000556631 PPP6R1Q9UPN7 881 aa3.12□□□□□ -1.91
KTN1-224ENST00000556631 PLPPR3Q6T4P5 718 aa3.1□□□□□ -1.91
KTN1-224ENST00000556631 KCNA4P22459 653 aa3.05□□□□□ -1.92
KTN1-224ENST00000556631 SENP3Q9H4L4 574 aaPredicted RBP3.04□□□□□ -1.92
KTN1-224ENST00000556631 SLC4A1APQ9BWU0 796 aaKnown RBP3.03□□□□□ -1.92
KTN1-224ENST00000556631 MYT1LQ9UL68 1186 aa3.03□□□□□ -1.92
KTN1-224ENST00000556631 HAP1P54257 671 aaPredicted RBP3.01□□□□□ -1.93
KTN1-224ENST00000556631 BCANQ96GW7 911 aa2.99□□□□□ -1.93
KTN1-224ENST00000556631 NCBP3Q53F19 620 aaKnown RBP2.99□□□□□ -1.93
KTN1-224ENST00000556631 CSRNP3Q8WYN3 585 aa2.99□□□□□ -1.93
KTN1-224ENST00000556631 FOXD1Q16676 465 aa2.98□□□□□ -1.93
KTN1-224ENST00000556631 DAXXQ9UER7 740 aaPredicted RBP2.98□□□□□ -1.93
KTN1-224ENST00000556631 HOMEZQ8IX15 550 aa2.95□□□□□ -1.94
KTN1-224ENST00000556631 ZBTB22O15209 634 aa2.95□□□□□ -1.94
KTN1-224ENST00000556631 RTN4Q9NQC3 1192 aaKnown RBP2.94□□□□□ -1.94
KTN1-224ENST00000556631 NBR1Q14596 966 aa2.93□□□□□ -1.94
KTN1-224ENST00000556631 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.93□□□□□ -1.94
KTN1-224ENST00000556631 C14orf37Q86TY3 774 aa2.92□□□□□ -1.94
KTN1-224ENST00000556631 ARXQ96QS3 562 aa2.9□□□□□ -1.95
KTN1-224ENST00000556631 HMGB1P09429 215 aaKnown RBP2.9□□□□□ -1.95
KTN1-224ENST00000556631 POLR3GLQ9BT43 218 aa2.9□□□□□ -1.95
KTN1-224ENST00000556631 TPRNQ4KMQ1 711 aa2.89□□□□□ -1.95
KTN1-224ENST00000556631 YTHDC1Q96MU7 727 aaKnown RBP2.88□□□□□ -1.95
KTN1-224ENST00000556631 DNAJC5BQ9UF47 199 aa2.88□□□□□ -1.95
KTN1-224ENST00000556631 FAM9AQ8IZU1 332 aaPredicted RBP2.87□□□□□ -1.95
KTN1-224ENST00000556631 TULP1O00294 542 aaPredicted RBP2.86□□□□□ -1.95
KTN1-224ENST00000556631 POTEHQ6S545 545 aa2.86□□□□□ -1.95
KTN1-224ENST00000556631 ATP1B4Q9UN42 357 aaPredicted RBP2.86□□□□□ -1.95
KTN1-224ENST00000556631 PODXL2Q9NZ53 605 aa2.85□□□□□ -1.95
KTN1-224ENST00000556631 FKBP8Q14318 412 aa2.84□□□□□ -1.95
KTN1-224ENST00000556631 CCER1Q8TC90 406 aaPredicted RBP2.84□□□□□ -1.96
KTN1-224ENST00000556631 NPM3O75607 178 aaKnown RBP2.83□□□□□ -1.96
KTN1-224ENST00000556631 CFAP44Q96MT7 982 aa2.82□□□□□ -1.96
KTN1-224ENST00000556631 CDK11BP21127 795 aaKnown RBP2.81□□□□□ -1.96
KTN1-224ENST00000556631 CDK11AQ9UQ88 783 aaPredicted RBP2.81□□□□□ -1.96
KTN1-224ENST00000556631 KLHL34Q8N239 644 aa2.8□□□□□ -1.96
KTN1-224ENST00000556631 TAOK2Q9UL54 1235 aa2.8□□□□□ -1.96
KTN1-224ENST00000556631 ZBTB7CA1YPR0 619 aa2.8□□□□□ -1.96
KTN1-224ENST00000556631 NPM2Q86SE8 214 aaKnown RBP2.8□□□□□ -1.96
KTN1-224ENST00000556631 PRKCSHP14314 528 aaPredicted RBP2.8□□□□□ -1.96
KTN1-224ENST00000556631 PPP4R3CPQ6ZMV5 832 aa2.8□□□□□ -1.96
KTN1-224ENST00000556631 EIF5BO60841 1220 aaKnown RBP2.79□□□□□ -1.96
KTN1-224ENST00000556631 GTF3C3Q9Y5Q9 886 aa2.79□□□□□ -1.96
KTN1-224ENST00000556631 SHROOM4Q9ULL8 1493 aa2.78□□□□□ -1.96
KTN1-224ENST00000556631 FBXO3Q9UK99 471 aa2.77□□□□□ -1.97
KTN1-224ENST00000556631 SCAF1Q9H7N4 1312 aaKnown RBP2.77□□□□□ -1.97
KTN1-224ENST00000556631 PLCB2Q00722 1185 aa2.77□□□□□ -1.97
KTN1-224ENST00000556631 VSIG10Q8N0Z9 540 aa2.76□□□□□ -1.97
KTN1-224ENST00000556631 ARID3AQ99856 593 aa2.76□□□□□ -1.97
KTN1-224ENST00000556631 PLEKHG5O94827 1062 aa2.75□□□□□ -1.97
KTN1-224ENST00000556631 CCDC9Q9Y3X0 531 aaKnown RBP2.75□□□□□ -1.97
KTN1-224ENST00000556631 PAXIP1Q6ZW49 1069 aaPredicted RBP2.75□□□□□ -1.97
KTN1-224ENST00000556631 SUPT5HO00267 1087 aaKnown RBP2.74□□□□□ -1.97
KTN1-224ENST00000556631 BCL11AQ9H165 835 aa2.72□□□□□ -1.97
KTN1-224ENST00000556631 MSH5O43196 834 aa2.72□□□□□ -1.97
KTN1-224ENST00000556631 SLC4A2P04920 1241 aa2.72□□□□□ -1.97
KTN1-224ENST00000556631 CNGB1Q14028 1251 aaPredicted RBP2.72□□□□□ -1.97
KTN1-224ENST00000556631 MAPK8IP2Q13387 824 aaPredicted RBP2.71□□□□□ -1.97
KTN1-224ENST00000556631 FOXD4L1Q9NU39 408 aa2.71□□□□□ -1.97
KTN1-224ENST00000556631 ARID4BQ4LE39 1312 aaPredicted RBP2.71□□□□□ -1.98
KTN1-224ENST00000556631 ZNF326Q5BKZ1 582 aaKnown RBP2.7□□□□□ -1.98
KTN1-224ENST00000556631 WDR70Q9NW82 654 aa2.7□□□□□ -1.98
KTN1-224ENST00000556631 PTMSP20962 102 aa2.7□□□□□ -1.98
KTN1-224ENST00000556631 PDIA4P13667 645 aaKnown RBP2.69□□□□□ -1.98
KTN1-224ENST00000556631 GLIPR1L2Q4G1C9 344 aa2.69□□□□□ -1.98
KTN1-224ENST00000556631 NEFLP07196 543 aa2.69□□□□□ -1.98
KTN1-224ENST00000556631 PIAS4Q8N2W9 510 aaPredicted RBP2.69□□□□□ -1.98
KTN1-224ENST00000556631 SPRYD3Q8NCJ5 442 aa2.69□□□□□ -1.98
KTN1-224ENST00000556631 HMGB1P1B2RPK0 211 aaPredicted RBP2.68□□□□□ -1.98
KTN1-224ENST00000556631 TIMELESSQ9UNS1 1208 aa2.68□□□□□ -1.98
KTN1-224ENST00000556631 USP35Q9P2H5 1018 aa2.66□□□□□ -1.98
KTN1-224ENST00000556631 HSP90B1P14625 803 aaKnown RBP2.66□□□□□ -1.98
KTN1-224ENST00000556631 RTL5Q5HYW3 569 aaPredicted RBP2.66□□□□□ -1.98
KTN1-224ENST00000556631 ECM2O94769 699 aaPredicted RBP2.65□□□□□ -1.98
KTN1-224ENST00000556631 PLCD3Q8N3E9 789 aa2.65□□□□□ -1.99
KTN1-224ENST00000556631 NEUROD2Q15784 382 aa2.64□□□□□ -1.99
KTN1-224ENST00000556631 CIZ1Q9ULV3 898 aaPredicted RBP2.64□□□□□ -1.99
KTN1-224ENST00000556631 CNKSR2Q8WXI2 1034 aa2.64□□□□□ -1.99
KTN1-224ENST00000556631 LAS1LQ9Y4W2 734 aaKnown RBP2.64□□□□□ -1.99
KTN1-224ENST00000556631 TMEM132AQ24JP5 1023 aa2.63□□□□□ -1.99
KTN1-224ENST00000556631 DCAF8L1A6NGE4 600 aa2.62□□□□□ -1.99
KTN1-224ENST00000556631 APLP2Q06481 763 aa2.62□□□□□ -1.99
KTN1-224ENST00000556631 AEBP1Q8IUX7 1158 aa2.62□□□□□ -1.99
KTN1-224ENST00000556631 KRI1Q8N9T8 703 aaKnown RBP2.62□□□□□ -1.99
KTN1-224ENST00000556631 ATF5Q9Y2D1 282 aaPredicted RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms