RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 MMP24-AS1A0A0U1RRL7 71 aa3.94□□□□□ -1.78
HNRNPC-226ENST00000556628 FAM236DA0A1B0GTK5 79 aa3.94□□□□□ -1.78
HNRNPC-226ENST00000556628 C8orf87E5RJ46 101 aa3.94□□□□□ -1.78
HNRNPC-226ENST00000556628 FAM236CP0DP71 79 aa3.94□□□□□ -1.78
HNRNPC-226ENST00000556628 hDV103S1A0JD37 113 aa3.93□□□□□ -1.78
HNRNPC-226ENST00000556628 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
HNRNPC-226ENST00000556628 C8orf17Q9NRJ1 99 aa3.93□□□□□ -1.78
HNRNPC-226ENST00000556628 C5orf47Q569G3 176 aa3.92□□□□□ -1.78
HNRNPC-226ENST00000556628 TMEM254Q8TBM7 123 aa3.92□□□□□ -1.78
HNRNPC-226ENST00000556628 RBM12B-AS1Q9P1G2 102 aa3.92□□□□□ -1.78
HNRNPC-226ENST00000556628 KRTAP16-1A8MUX0 517 aa3.91□□□□□ -1.78
HNRNPC-226ENST00000556628 KLKP1Q107X0 134 aa3.91□□□□□ -1.78
HNRNPC-226ENST00000556628 C20orf197Q8N268 126 aa3.91□□□□□ -1.78
HNRNPC-226ENST00000556628 MRPL34Q9BQ48 92 aaKnown RBP3.91□□□□□ -1.78
HNRNPC-226ENST00000556628 TP53AIP1Q9HCN2 124 aa3.91□□□□□ -1.78
HNRNPC-226ENST00000556628 FLGP20930 4061 aaPredicted RBP3.9□□□□□ -1.78
HNRNPC-226ENST00000556628 NDUFC1O43677 76 aa3.9□□□□□ -1.79
HNRNPC-226ENST00000556628 MP68P56378 58 aa3.89□□□□□ -1.79
HNRNPC-226ENST00000556628 NOTCH2NLQ7Z3S9 236 aa3.89□□□□□ -1.79
HNRNPC-226ENST00000556628 H3BPC8 53 aa3.88□□□□□ -1.79
HNRNPC-226ENST00000556628 FSIP2Q5CZC0 6907 aa3.87□□□□□ -1.79
HNRNPC-226ENST00000556628 NDUFS5O43920 106 aa3.87□□□□□ -1.79
HNRNPC-226ENST00000556628 TMEM258P61165 79 aa3.87□□□□□ -1.79
HNRNPC-226ENST00000556628 TRAV22A0A0B4J277 110 aa3.86□□□□□ -1.79
HNRNPC-226ENST00000556628 HRES1P13985 223 aa3.86□□□□□ -1.79
HNRNPC-226ENST00000556628 SNURFQ9Y675 71 aa3.86□□□□□ -1.79
HNRNPC-226ENST00000556628 H0Y9P7 68 aa3.85□□□□□ -1.79
HNRNPC-226ENST00000556628 ZCCHC13Q8WW36 166 aaKnown RBP3.85□□□□□ -1.79
HNRNPC-226ENST00000556628 H7BZZ5 65 aa3.84□□□□□ -1.79
HNRNPC-226ENST00000556628 CYSTM1Q9H1C7 97 aa3.84□□□□□ -1.79
HNRNPC-226ENST00000556628 LINC00208Q96KT6 92 aa3.83□□□□□ -1.8
HNRNPC-226ENST00000556628 ATP5EP56381 51 aaPredicted RBP3.82□□□□□ -1.8
HNRNPC-226ENST00000556628 SPINK7P58062 85 aa3.82□□□□□ -1.8
HNRNPC-226ENST00000556628 C1orf64Q8NEQ6 169 aa3.82□□□□□ -1.8
HNRNPC-226ENST00000556628 LOC101927531A0A1B0GV80 90 aa3.79□□□□□ -1.8
HNRNPC-226ENST00000556628 MT2AP02795 61 aa3.79□□□□□ -1.8
HNRNPC-226ENST00000556628 KRTAP10-10P60014 251 aa3.79□□□□□ -1.8
HNRNPC-226ENST00000556628 RPS28P62857 69 aaKnown RBP3.77□□□□□ -1.81
HNRNPC-226ENST00000556628 Q5W150 140 aa3.77□□□□□ -1.81
HNRNPC-226ENST00000556628 SPANXA2-OT1Q8N9U9 137 aa3.77□□□□□ -1.81
HNRNPC-226ENST00000556628 MT1FP04733 61 aa3.75□□□□□ -1.81
HNRNPC-226ENST00000556628 CYP4F30PQ9H0H9 118 aa3.74□□□□□ -1.81
HNRNPC-226ENST00000556628 SERP1Q9Y6X1 66 aa3.74□□□□□ -1.81
HNRNPC-226ENST00000556628 USH2AO75445 5202 aa3.71□□□□□ -1.82
HNRNPC-226ENST00000556628 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
HNRNPC-226ENST00000556628 H1FX-AS1Q4G0G2 97 aa3.7□□□□□ -1.82
HNRNPC-226ENST00000556628 C7orf65Q6ZTY9 151 aa3.7□□□□□ -1.82
HNRNPC-226ENST00000556628 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
HNRNPC-226ENST00000556628 SMIM26A0A096LP01 95 aa3.66□□□□□ -1.82
HNRNPC-226ENST00000556628 ACYP2P14621 99 aa3.64□□□□□ -1.83
HNRNPC-226ENST00000556628 MT3P25713 68 aa3.64□□□□□ -1.83
HNRNPC-226ENST00000556628 DMAC1Q96GE9 116 aa3.64□□□□□ -1.83
HNRNPC-226ENST00000556628 A8MUN3 132 aa3.63□□□□□ -1.83
HNRNPC-226ENST00000556628 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
HNRNPC-226ENST00000556628 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
HNRNPC-226ENST00000556628 C4orf26Q17RF5 130 aa3.62□□□□□ -1.83
HNRNPC-226ENST00000556628 COA5Q86WW8 74 aa3.62□□□□□ -1.83
HNRNPC-226ENST00000556628 KRTAP19-6Q3LI70 58 aa3.61□□□□□ -1.83
HNRNPC-226ENST00000556628 V9GYY9 64 aa3.59□□□□□ -1.83
HNRNPC-226ENST00000556628 CHKB-CPT1BH3BT56 60 aa3.58□□□□□ -1.84
HNRNPC-226ENST00000556628 Q1T7F1 81 aa3.57□□□□□ -1.84
HNRNPC-226ENST00000556628 S4R3F8 94 aa3.57□□□□□ -1.84
HNRNPC-226ENST00000556628 CSAG1Q6PB30 78 aa3.55□□□□□ -1.84
HNRNPC-226ENST00000556628 SPTSSBQ8NFR3 76 aa3.54□□□□□ -1.84
HNRNPC-226ENST00000556628 LCA10Q71F78 164 aa3.52□□□□□ -1.85
HNRNPC-226ENST00000556628 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
HNRNPC-226ENST00000556628 LINC01558Q9Y6Z2 57 aa3.51□□□□□ -1.85
HNRNPC-226ENST00000556628 KRTAP10-5P60370 271 aa3.5□□□□□ -1.85
HNRNPC-226ENST00000556628 Q5VV11 94 aa3.49□□□□□ -1.85
HNRNPC-226ENST00000556628 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
HNRNPC-226ENST00000556628 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
HNRNPC-226ENST00000556628 PRR15LQ9BU68 103 aa3.48□□□□□ -1.85
HNRNPC-226ENST00000556628 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
HNRNPC-226ENST00000556628 A6NN06 94 aa3.47□□□□□ -1.85
HNRNPC-226ENST00000556628 PSPHP1O15172 72 aa3.47□□□□□ -1.85
HNRNPC-226ENST00000556628 PRO0628Q9UI54 55 aa3.47□□□□□ -1.85
HNRNPC-226ENST00000556628 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.86
HNRNPC-226ENST00000556628 A0A1B0GU69 56 aa3.46□□□□□ -1.86
HNRNPC-226ENST00000556628 KRTAP6-3Q3LI67 103 aa3.46□□□□□ -1.86
HNRNPC-226ENST00000556628 SEC61GP60059 68 aa3.45□□□□□ -1.86
HNRNPC-226ENST00000556628 SPRR2GQ9BYE4 73 aa3.45□□□□□ -1.86
HNRNPC-226ENST00000556628 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
HNRNPC-226ENST00000556628 MT1BP07438 61 aa3.43□□□□□ -1.86
HNRNPC-226ENST00000556628 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
HNRNPC-226ENST00000556628 CRIPTQ9P021 101 aa3.43□□□□□ -1.86
HNRNPC-226ENST00000556628 A6NED7 52 aa3.39□□□□□ -1.87
HNRNPC-226ENST00000556628 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
HNRNPC-226ENST00000556628 H0YAA0 97 aa3.38□□□□□ -1.87
HNRNPC-226ENST00000556628 BRK1Q8WUW1 75 aa3.38□□□□□ -1.87
HNRNPC-226ENST00000556628 UQCR11O14957 56 aa3.36□□□□□ -1.87
HNRNPC-226ENST00000556628 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
HNRNPC-226ENST00000556628 ADM2Q7Z4H4 148 aa3.34□□□□□ -1.87
HNRNPC-226ENST00000556628 CDC42SE1Q9NRR8 79 aa3.34□□□□□ -1.87
HNRNPC-226ENST00000556628 A0A1B0GU33 70 aa3.33□□□□□ -1.88
HNRNPC-226ENST00000556628 MIR22HGQ0VDD5 57 aa3.32□□□□□ -1.88
HNRNPC-226ENST00000556628 SPATA8Q6RVD6 105 aa3.31□□□□□ -1.88
HNRNPC-226ENST00000556628 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
HNRNPC-226ENST00000556628 PLAC4Q8WY50 150 aa3.29□□□□□ -1.88
HNRNPC-226ENST00000556628 R4GN34 69 aa3.29□□□□□ -1.88
HNRNPC-226ENST00000556628 KRTAP10-12P60413 245 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms