RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 A8MUN3 132 aa3.58□□□□□ -1.84
CPSF2-205ENST00000556622 PCOTHQ58A44 107 aa3.58□□□□□ -1.84
CPSF2-205ENST00000556622 LRP1BQ9NZR2 4599 aa3.58□□□□□ -1.84
CPSF2-205ENST00000556622 PANO1I0J062 215 aa3.57□□□□□ -1.84
CPSF2-205ENST00000556622 SPINK1P00995 79 aa3.57□□□□□ -1.84
CPSF2-205ENST00000556622 SPAG11AQ6PDA7 123 aa3.57□□□□□ -1.84
CPSF2-205ENST00000556622 SPTSSBQ8NFR3 76 aa3.57□□□□□ -1.84
CPSF2-205ENST00000556622 CDC42SE1Q9NRR8 79 aa3.57□□□□□ -1.84
CPSF2-205ENST00000556622 RPS29P62273 56 aaKnown RBP3.56□□□□□ -1.84
CPSF2-205ENST00000556622 Q5VSD8 79 aa3.56□□□□□ -1.84
CPSF2-205ENST00000556622 Q5VV11 94 aa3.56□□□□□ -1.84
CPSF2-205ENST00000556622 SPINK6Q6UWN8 80 aa3.56□□□□□ -1.84
CPSF2-205ENST00000556622 DNAH5Q8TE73 4624 aa3.56□□□□□ -1.84
CPSF2-205ENST00000556622 HERC2O95714 4834 aa3.55□□□□□ -1.84
CPSF2-205ENST00000556622 Q6ZSA8 131 aa3.55□□□□□ -1.84
CPSF2-205ENST00000556622 A0A087X002 238 aa3.54□□□□□ -1.84
CPSF2-205ENST00000556622 NOTCH2NLQ7Z3S9 236 aa3.54□□□□□ -1.84
CPSF2-205ENST00000556622 HSPG2P98160 4391 aa3.54□□□□□ -1.84
CPSF2-205ENST00000556622 HRES1P13985 223 aa3.53□□□□□ -1.84
CPSF2-205ENST00000556622 DMAC1Q96GE9 116 aa3.53□□□□□ -1.84
CPSF2-205ENST00000556622 APOBP04114 4563 aaKnown RBP3.53□□□□□ -1.84
CPSF2-205ENST00000556622 RYR1P21817 5038 aa3.52□□□□□ -1.85
CPSF2-205ENST00000556622 SEC61GP60059 68 aa3.52□□□□□ -1.85
CPSF2-205ENST00000556622 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
CPSF2-205ENST00000556622 FLG2Q5D862 2391 aaPredicted RBP3.51□□□□□ -1.85
CPSF2-205ENST00000556622 A0A1B0GU69 56 aa3.5□□□□□ -1.85
CPSF2-205ENST00000556622 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
CPSF2-205ENST00000556622 TYMSOSQ8TAI1 123 aa3.5□□□□□ -1.85
CPSF2-205ENST00000556622 FAT1Q14517 4588 aa3.49□□□□□ -1.85
CPSF2-205ENST00000556622 DNAH8Q96JB1 4490 aa3.49□□□□□ -1.85
CPSF2-205ENST00000556622 KRTAP13-3Q3SY46 172 aa3.49□□□□□ -1.85
CPSF2-205ENST00000556622 ANAPC11Q9NYG5 84 aa3.49□□□□□ -1.85
CPSF2-205ENST00000556622 SRRM2Q9UQ35 2752 aaKnown RBP3.49□□□□□ -1.85
CPSF2-205ENST00000556622 UQCR11O14957 56 aa3.48□□□□□ -1.85
CPSF2-205ENST00000556622 Q5W150 140 aa3.48□□□□□ -1.85
CPSF2-205ENST00000556622 C7orf65Q6ZTY9 151 aa3.47□□□□□ -1.85
CPSF2-205ENST00000556622 KRTAP10-4P60372 401 aaPredicted RBP3.45□□□□□ -1.86
CPSF2-205ENST00000556622 LCA10Q71F78 164 aa3.44□□□□□ -1.86
CPSF2-205ENST00000556622 LINC00304Q8N9R0 145 aa3.44□□□□□ -1.86
CPSF2-205ENST00000556622 ABCA13Q86UQ4 5058 aa3.44□□□□□ -1.86
CPSF2-205ENST00000556622 DMBT1Q9UGM3 2413 aaPredicted RBP3.43□□□□□ -1.86
CPSF2-205ENST00000556622 KRTAP13-2Q52LG2 175 aa3.43□□□□□ -1.86
CPSF2-205ENST00000556622 PCLOQ9Y6V0 5065 aa3.42□□□□□ -1.86
CPSF2-205ENST00000556622 KRTAP16-1A8MUX0 517 aa3.42□□□□□ -1.86
CPSF2-205ENST00000556622 SPATA8Q6RVD6 105 aa3.42□□□□□ -1.86
CPSF2-205ENST00000556622 A6NN06 94 aa3.41□□□□□ -1.86
CPSF2-205ENST00000556622 KRTAP1-4P0C5Y4 121 aa3.41□□□□□ -1.86
CPSF2-205ENST00000556622 MIR22HGQ0VDD5 57 aa3.41□□□□□ -1.86
CPSF2-205ENST00000556622 VPS13BQ7Z7G8 4022 aa3.41□□□□□ -1.86
CPSF2-205ENST00000556622 SPINK7P58062 85 aa3.39□□□□□ -1.87
CPSF2-205ENST00000556622 K7ERS5 55 aa3.38□□□□□ -1.87
CPSF2-205ENST00000556622 RETNLBQ9BQ08 111 aa3.38□□□□□ -1.87
CPSF2-205ENST00000556622 MYCBP2O75592 4640 aa3.36□□□□□ -1.87
CPSF2-205ENST00000556622 A8MUU9 505 aa3.36□□□□□ -1.87
CPSF2-205ENST00000556622 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
CPSF2-205ENST00000556622 C20orf166-AS1Q96NR2 134 aa3.36□□□□□ -1.87
CPSF2-205ENST00000556622 LRP1Q07954 4544 aaKnown RBP3.36□□□□□ -1.87
CPSF2-205ENST00000556622 MT1HL1P0DM35 61 aa3.35□□□□□ -1.87
CPSF2-205ENST00000556622 KRTAP10-8P60410 259 aa3.35□□□□□ -1.87
CPSF2-205ENST00000556622 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
CPSF2-205ENST00000556622 NDUFAF8A1L188 74 aa3.33□□□□□ -1.88
CPSF2-205ENST00000556622 RBM12B-AS1Q9P1G2 102 aa3.33□□□□□ -1.88
CPSF2-205ENST00000556622 HERC1Q15751 4861 aa3.32□□□□□ -1.88
CPSF2-205ENST00000556622 FAT3Q8TDW7 4589 aa3.31□□□□□ -1.88
CPSF2-205ENST00000556622 PKHD1L1Q86WI1 4243 aa3.31□□□□□ -1.88
CPSF2-205ENST00000556622 A0A1B0GU33 70 aa3.29□□□□□ -1.88
CPSF2-205ENST00000556622 A8MU10 97 aa3.29□□□□□ -1.88
CPSF2-205ENST00000556622 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
CPSF2-205ENST00000556622 COX6B2Q6YFQ2 88 aa3.29□□□□□ -1.88
CPSF2-205ENST00000556622 TNXBP22105 4242 aa3.24□□□□□ -1.89
CPSF2-205ENST00000556622 C9orf92A6NGG3 77 aa3.24□□□□□ -1.89
CPSF2-205ENST00000556622 H1FX-AS1Q4G0G2 97 aa3.24□□□□□ -1.89
CPSF2-205ENST00000556622 LINC01554Q52M75 96 aa3.24□□□□□ -1.89
CPSF2-205ENST00000556622 RPL37P61927 97 aaKnown RBP3.2□□□□□ -1.9
CPSF2-205ENST00000556622 HMCN2Q8NDA2 5059 aa3.17□□□□□ -1.9
CPSF2-205ENST00000556622 S4R3F8 94 aa3.17□□□□□ -1.9
CPSF2-205ENST00000556622 H0YAA0 97 aa3.16□□□□□ -1.9
CPSF2-205ENST00000556622 CSAG1Q6PB30 78 aa3.15□□□□□ -1.91
CPSF2-205ENST00000556622 LRP2P98164 4655 aa3.14□□□□□ -1.91
CPSF2-205ENST00000556622 LPAP08519 4548 aa3.13□□□□□ -1.91
CPSF2-205ENST00000556622 UBR4Q5T4S7 5183 aa3.13□□□□□ -1.91
CPSF2-205ENST00000556622 ROMO1P60602 79 aa3.13□□□□□ -1.91
CPSF2-205ENST00000556622 KRTAP25-1Q3LHN0 102 aa3.13□□□□□ -1.91
CPSF2-205ENST00000556622 M0QZ58 72 aa3.12□□□□□ -1.91
CPSF2-205ENST00000556622 TPRXLQ17RH7 258 aa3.11□□□□□ -1.91
CPSF2-205ENST00000556622 ADM2Q7Z4H4 148 aa3.09□□□□□ -1.91
CPSF2-205ENST00000556622 CRIPTQ9P021 101 aa3.09□□□□□ -1.91
CPSF2-205ENST00000556622 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
CPSF2-205ENST00000556622 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
CPSF2-205ENST00000556622 RNF213Q63HN8 5207 aa3.01□□□□□ -1.93
CPSF2-205ENST00000556622 A0A0D9SG42 100 aa3□□□□□ -1.93
CPSF2-205ENST00000556622 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
CPSF2-205ENST00000556622 KRTAP4-1Q9BYQ7 146 aa2.98□□□□□ -1.93
CPSF2-205ENST00000556622 MUC17Q685J3 4493 aa2.97□□□□□ -1.93
CPSF2-205ENST00000556622 SPINT4Q6UDR6 99 aa2.97□□□□□ -1.93
CPSF2-205ENST00000556622 R4GN34 69 aa2.97□□□□□ -1.93
CPSF2-205ENST00000556622 MUC2Q02817 5179 aa2.97□□□□□ -1.93
CPSF2-205ENST00000556622 P0C880 135 aa2.95□□□□□ -1.94
CPSF2-205ENST00000556622 KRTAP12-1P59990 96 aa2.92□□□□□ -1.94
CPSF2-205ENST00000556622 KRTAP13-4Q3LI77 160 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms