RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 H3BPC8 53 aa7.93□□□□□ -1.14
PSEN1-217ENST00000556533 SMIM20Q8N5G0 67 aa7.93□□□□□ -1.14
PSEN1-217ENST00000556533 KRTAP3-3Q9BYR6 98 aa7.93□□□□□ -1.14
PSEN1-217ENST00000556533 A8MUN3 132 aa7.89□□□□□ -1.15
PSEN1-217ENST00000556533 SSPOA2VEC9 5147 aa7.89□□□□□ -1.15
PSEN1-217ENST00000556533 ANAPC13Q9BS18 74 aa7.88□□□□□ -1.15
PSEN1-217ENST00000556533 NDUFC1O43677 76 aa7.87□□□□□ -1.15
PSEN1-217ENST00000556533 TRAV7A0A075B6U4 112 aa7.85□□□□□ -1.15
PSEN1-217ENST00000556533 SERP2Q8N6R1 65 aa7.84□□□□□ -1.15
PSEN1-217ENST00000556533 PCP4P48539 62 aa7.81□□□□□ -1.16
PSEN1-217ENST00000556533 KRTAP19-1Q8IUB9 90 aa7.8□□□□□ -1.16
PSEN1-217ENST00000556533 COX7CP15954 63 aa7.79□□□□□ -1.16
PSEN1-217ENST00000556533 DMAC1Q96GE9 116 aa7.74□□□□□ -1.17
PSEN1-217ENST00000556533 SNURFQ9Y675 71 aa7.7□□□□□ -1.18
PSEN1-217ENST00000556533 FCGBPQ9Y6R7 5405 aaPredicted RBP7.69□□□□□ -1.18
PSEN1-217ENST00000556533 ADM2Q7Z4H4 148 aa7.68□□□□□ -1.18
PSEN1-217ENST00000556533 SPRR2GQ9BYE4 73 aa7.67□□□□□ -1.18
PSEN1-217ENST00000556533 H0YAA0 97 aa7.66□□□□□ -1.18
PSEN1-217ENST00000556533 CCDC179H3BU77 68 aa7.66□□□□□ -1.18
PSEN1-217ENST00000556533 KRTAP19-6Q3LI70 58 aa7.66□□□□□ -1.18
PSEN1-217ENST00000556533 C20orf197Q8N268 126 aa7.65□□□□□ -1.18
PSEN1-217ENST00000556533 ACYP2P14621 99 aa7.64□□□□□ -1.19
PSEN1-217ENST00000556533 CRIPTQ9P021 101 aa7.64□□□□□ -1.19
PSEN1-217ENST00000556533 Q5VV11 94 aa7.63□□□□□ -1.19
PSEN1-217ENST00000556533 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-217ENST00000556533 KRTAP19-8Q3LI54 63 aa7.58□□□□□ -1.2
PSEN1-217ENST00000556533 MT1BP07438 61 aa7.57□□□□□ -1.2
PSEN1-217ENST00000556533 CHKB-CPT1BH3BT56 60 aa7.53□□□□□ -1.2
PSEN1-217ENST00000556533 P0C880 135 aa7.51□□□□□ -1.21
PSEN1-217ENST00000556533 SPTSSBQ8NFR3 76 aa7.51□□□□□ -1.21
PSEN1-217ENST00000556533 H7BZZ5 65 aa7.5□□□□□ -1.21
PSEN1-217ENST00000556533 SPANXA2-OT1Q8N9U9 137 aa7.5□□□□□ -1.21
PSEN1-217ENST00000556533 CYSTM1Q9H1C7 97 aa7.49□□□□□ -1.21
PSEN1-217ENST00000556533 TMEM258P61165 79 aa7.48□□□□□ -1.21
PSEN1-217ENST00000556533 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.22
PSEN1-217ENST00000556533 A6NN06 94 aa7.45□□□□□ -1.22
PSEN1-217ENST00000556533 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
PSEN1-217ENST00000556533 R4GN34 69 aa7.45□□□□□ -1.22
PSEN1-217ENST00000556533 KRTAP9-7A8MTY7 169 aa7.43□□□□□ -1.22
PSEN1-217ENST00000556533 M0QZ58 72 aa7.41□□□□□ -1.22
PSEN1-217ENST00000556533 KRTAP10-5P60370 271 aa7.36□□□□□ -1.23
PSEN1-217ENST00000556533 MACF1Q9UPN3 7388 aaKnown RBP7.36□□□□□ -1.23
PSEN1-217ENST00000556533 LINC01554Q52M75 96 aa7.34□□□□□ -1.23
PSEN1-217ENST00000556533 PLAC4Q8WY50 150 aa7.33□□□□□ -1.24
PSEN1-217ENST00000556533 COA5Q86WW8 74 aa7.32□□□□□ -1.24
PSEN1-217ENST00000556533 SERP1Q9Y6X1 66 aa7.24□□□□□ -1.25
PSEN1-217ENST00000556533 SYNE2Q8WXH0 6885 aaKnown RBP7.22□□□□□ -1.25
PSEN1-217ENST00000556533 RPS28P62857 69 aaKnown RBP7.21□□□□□ -1.26
PSEN1-217ENST00000556533 PRO2289Q9P1D8 64 aa7.19□□□□□ -1.26
PSEN1-217ENST00000556533 MT1XP80297 61 aa7.16□□□□□ -1.26
PSEN1-217ENST00000556533 SEC61GP60059 68 aa7.15□□□□□ -1.26
PSEN1-217ENST00000556533 KRTAP6-3Q3LI67 103 aa7.15□□□□□ -1.26
PSEN1-217ENST00000556533 KRTAP13-4Q3LI77 160 aa7.08□□□□□ -1.28
PSEN1-217ENST00000556533 SMIM26A0A096LP01 95 aa7.04□□□□□ -1.28
PSEN1-217ENST00000556533 A0A1B0GU33 70 aa6.99□□□□□ -1.29
PSEN1-217ENST00000556533 A0A0D9SG42 100 aa6.97□□□□□ -1.29
PSEN1-217ENST00000556533 SPATA8Q6RVD6 105 aa6.97□□□□□ -1.29
PSEN1-217ENST00000556533 A0A1B0GU69 56 aa6.96□□□□□ -1.3
PSEN1-217ENST00000556533 V9GYY9 64 aa6.95□□□□□ -1.3
PSEN1-217ENST00000556533 SVIPQ8NHG7 77 aa6.93□□□□□ -1.3
PSEN1-217ENST00000556533 CAMK2N1Q7Z7J9 78 aa6.92□□□□□ -1.3
PSEN1-217ENST00000556533 KRTAP12-2P59991 146 aa6.91□□□□□ -1.3
PSEN1-217ENST00000556533 Q1T7F1 81 aa6.91□□□□□ -1.3
PSEN1-217ENST00000556533 KRTAP5-9P26371 169 aa6.88□□□□□ -1.31
PSEN1-217ENST00000556533 KMT2DO14686 5537 aa6.88□□□□□ -1.31
PSEN1-217ENST00000556533 LINC01558Q9Y6Z2 57 aa6.87□□□□□ -1.31
PSEN1-217ENST00000556533 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
PSEN1-217ENST00000556533 SPINT4Q6UDR6 99 aa6.85□□□□□ -1.31
PSEN1-217ENST00000556533 KRTAP8-1Q8IUC2 63 aa6.85□□□□□ -1.31
PSEN1-217ENST00000556533 MUC12Q9UKN1 5478 aa6.83□□□□□ -1.32
PSEN1-217ENST00000556533 KRTAP4-8A0A0G2JLE6 195 aa6.82□□□□□ -1.32
PSEN1-217ENST00000556533 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
PSEN1-217ENST00000556533 SPRR2FQ96RM1 72 aa6.81□□□□□ -1.32
PSEN1-217ENST00000556533 PRR15LQ9BU68 103 aa6.81□□□□□ -1.32
PSEN1-217ENST00000556533 NEBP20929 6669 aa6.79□□□□□ -1.32
PSEN1-217ENST00000556533 KRTAP10-12P60413 245 aa6.78□□□□□ -1.32
PSEN1-217ENST00000556533 A8MU10 97 aa6.76□□□□□ -1.33
PSEN1-217ENST00000556533 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
PSEN1-217ENST00000556533 MDN1Q9NU22 5596 aa6.74□□□□□ -1.33
PSEN1-217ENST00000556533 PSPHP1O15172 72 aa6.71□□□□□ -1.34
PSEN1-217ENST00000556533 SPRR2EP22531 72 aa6.66□□□□□ -1.34
PSEN1-217ENST00000556533 SPRR2BP35325 72 aa6.66□□□□□ -1.34
PSEN1-217ENST00000556533 SPRR2AP35326 72 aa6.66□□□□□ -1.34
PSEN1-217ENST00000556533 UQCR11O14957 56 aa6.58□□□□□ -1.36
PSEN1-217ENST00000556533 A6NED7 52 aa6.56□□□□□ -1.36
PSEN1-217ENST00000556533 LCE1AQ5T7P2 110 aa6.56□□□□□ -1.36
PSEN1-217ENST00000556533 KRTAP20-1Q3LI63 56 aa6.55□□□□□ -1.36
PSEN1-217ENST00000556533 MIR22HGQ0VDD5 57 aa6.48□□□□□ -1.37
PSEN1-217ENST00000556533 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.38
PSEN1-217ENST00000556533 CDC42SE1Q9NRR8 79 aa6.46□□□□□ -1.38
PSEN1-217ENST00000556533 SPRR2DP22532 72 aa6.44□□□□□ -1.38
PSEN1-217ENST00000556533 KRTAP2-3P0C7H8 128 aa6.43□□□□□ -1.38
PSEN1-217ENST00000556533 KRTAP2-4Q9BYR9 128 aa6.43□□□□□ -1.38
PSEN1-217ENST00000556533 BRK1Q8WUW1 75 aa6.42□□□□□ -1.38
PSEN1-217ENST00000556533 TNP1P09430 55 aa6.4□□□□□ -1.38
PSEN1-217ENST00000556533 KRTAP19-7Q3SYF9 63 aa6.38□□□□□ -1.39
PSEN1-217ENST00000556533 KRTAP19-5Q3LI72 72 aa6.34□□□□□ -1.39
PSEN1-217ENST00000556533 MT1EP04732 61 aa6.33□□□□□ -1.4
PSEN1-217ENST00000556533 K7ERS5 55 aa6.32□□□□□ -1.4
PSEN1-217ENST00000556533 PRO0628Q9UI54 55 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms