RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 NDUFC1O43677 76 aa6.79□□□□□ -1.32
CHD8-208ENST00000555301 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
CHD8-208ENST00000555301 MT2AP02795 61 aa6.78□□□□□ -1.32
CHD8-208ENST00000555301 ACYP2P14621 99 aa6.78□□□□□ -1.32
CHD8-208ENST00000555301 MT1FP04733 61 aa6.72□□□□□ -1.33
CHD8-208ENST00000555301 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
CHD8-208ENST00000555301 LCE2DQ5TA82 110 aaPredicted RBP6.72□□□□□ -1.33
CHD8-208ENST00000555301 H7BZZ5 65 aa6.71□□□□□ -1.34
CHD8-208ENST00000555301 CCDC179H3BU77 68 aa6.69□□□□□ -1.34
CHD8-208ENST00000555301 CYSTM1Q9H1C7 97 aa6.69□□□□□ -1.34
CHD8-208ENST00000555301 KRTAP9-2Q9BYQ4 174 aa6.67□□□□□ -1.34
CHD8-208ENST00000555301 CHKB-CPT1BH3BT56 60 aa6.66□□□□□ -1.34
CHD8-208ENST00000555301 SPTSSBQ8NFR3 76 aa6.65□□□□□ -1.34
CHD8-208ENST00000555301 H0YAA0 97 aa6.63□□□□□ -1.35
CHD8-208ENST00000555301 KRTAP9-3Q9BYQ3 159 aa6.61□□□□□ -1.35
CHD8-208ENST00000555301 COA5Q86WW8 74 aa6.57□□□□□ -1.36
CHD8-208ENST00000555301 ADM2Q7Z4H4 148 aa6.55□□□□□ -1.36
CHD8-208ENST00000555301 ATP5EP56381 51 aaPredicted RBP6.54□□□□□ -1.36
CHD8-208ENST00000555301 CRIPTQ9P021 101 aa6.52□□□□□ -1.37
CHD8-208ENST00000555301 TMEM258P61165 79 aa6.5□□□□□ -1.37
CHD8-208ENST00000555301 LCE2BO14633 110 aa6.48□□□□□ -1.37
CHD8-208ENST00000555301 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
CHD8-208ENST00000555301 SPRR2GQ9BYE4 73 aa6.45□□□□□ -1.38
CHD8-208ENST00000555301 KRTAP3-2Q9BYR7 98 aa6.44□□□□□ -1.38
CHD8-208ENST00000555301 P0C880 135 aa6.43□□□□□ -1.38
CHD8-208ENST00000555301 FSIP2Q5CZC0 6907 aa6.42□□□□□ -1.38
CHD8-208ENST00000555301 USH2AO75445 5202 aa6.4□□□□□ -1.38
CHD8-208ENST00000555301 PCP4P48539 62 aa6.38□□□□□ -1.39
CHD8-208ENST00000555301 R4GN34 69 aa6.38□□□□□ -1.39
CHD8-208ENST00000555301 CRCT1Q9UGL9 99 aa6.37□□□□□ -1.39
CHD8-208ENST00000555301 SEC61GP60059 68 aa6.36□□□□□ -1.39
CHD8-208ENST00000555301 KRTAP19-8Q3LI54 63 aa6.34□□□□□ -1.39
CHD8-208ENST00000555301 KRTAP9-6A0A140TA67 174 aa6.33□□□□□ -1.4
CHD8-208ENST00000555301 M0QZ58 72 aa6.33□□□□□ -1.4
CHD8-208ENST00000555301 SERP1Q9Y6X1 66 aa6.33□□□□□ -1.4
CHD8-208ENST00000555301 Q5VV11 94 aa6.32□□□□□ -1.4
CHD8-208ENST00000555301 SSPOA2VEC9 5147 aa6.27□□□□□ -1.41
CHD8-208ENST00000555301 MT1BP07438 61 aa6.26□□□□□ -1.41
CHD8-208ENST00000555301 A0A1B0GU69 56 aa6.25□□□□□ -1.41
CHD8-208ENST00000555301 KRTAP19-6Q3LI70 58 aa6.22□□□□□ -1.41
CHD8-208ENST00000555301 LINC01554Q52M75 96 aa6.21□□□□□ -1.42
CHD8-208ENST00000555301 PRR15LQ9BU68 103 aa6.2□□□□□ -1.42
CHD8-208ENST00000555301 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
CHD8-208ENST00000555301 A0A1B0GU33 70 aa6.18□□□□□ -1.42
CHD8-208ENST00000555301 PLAC4Q8WY50 150 aa6.17□□□□□ -1.42
CHD8-208ENST00000555301 KRTAP13-4Q3LI77 160 aa6.15□□□□□ -1.42
CHD8-208ENST00000555301 A6NN06 94 aa6.11□□□□□ -1.43
CHD8-208ENST00000555301 V9GYY9 64 aa6.1□□□□□ -1.43
CHD8-208ENST00000555301 RPS28P62857 69 aaKnown RBP6.09□□□□□ -1.43
CHD8-208ENST00000555301 SPATA8Q6RVD6 105 aa6.08□□□□□ -1.44
CHD8-208ENST00000555301 FCGBPQ9Y6R7 5405 aaPredicted RBP6.07□□□□□ -1.44
CHD8-208ENST00000555301 SMIM26A0A096LP01 95 aa6.07□□□□□ -1.44
CHD8-208ENST00000555301 KRTAP10-5P60370 271 aa6.06□□□□□ -1.44
CHD8-208ENST00000555301 Q1T7F1 81 aa6.05□□□□□ -1.44
CHD8-208ENST00000555301 PRO2289Q9P1D8 64 aa6.03□□□□□ -1.44
CHD8-208ENST00000555301 A0A0D9SG42 100 aa6.02□□□□□ -1.45
CHD8-208ENST00000555301 UQCR11O14957 56 aa5.99□□□□□ -1.45
CHD8-208ENST00000555301 MT1XP80297 61 aa5.97□□□□□ -1.45
CHD8-208ENST00000555301 PSPHP1O15172 72 aa5.95□□□□□ -1.46
CHD8-208ENST00000555301 SPINT4Q6UDR6 99 aa5.93□□□□□ -1.46
CHD8-208ENST00000555301 A8MU10 97 aa5.92□□□□□ -1.46
CHD8-208ENST00000555301 CAMK2N1Q7Z7J9 78 aa5.92□□□□□ -1.46
CHD8-208ENST00000555301 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.91□□□□□ -1.46
CHD8-208ENST00000555301 KRTAP12-1P59990 96 aa5.91□□□□□ -1.46
CHD8-208ENST00000555301 MACF1Q9UPN3 7388 aaKnown RBP5.88□□□□□ -1.47
CHD8-208ENST00000555301 KRTAP12-2P59991 146 aa5.87□□□□□ -1.47
CHD8-208ENST00000555301 MIR22HGQ0VDD5 57 aa5.87□□□□□ -1.47
CHD8-208ENST00000555301 A6NED7 52 aa5.8□□□□□ -1.48
CHD8-208ENST00000555301 SYNE2Q8WXH0 6885 aaKnown RBP5.73□□□□□ -1.49
CHD8-208ENST00000555301 KRTAP9-7A8MTY7 169 aa5.73□□□□□ -1.49
CHD8-208ENST00000555301 K7ERS5 55 aa5.73□□□□□ -1.49
CHD8-208ENST00000555301 KRTAP10-7P60409 375 aaPredicted RBP5.7□□□□□ -1.5
CHD8-208ENST00000555301 KRTAP10-12P60413 245 aa5.69□□□□□ -1.5
CHD8-208ENST00000555301 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
CHD8-208ENST00000555301 CDC42SE1Q9NRR8 79 aa5.63□□□□□ -1.51
CHD8-208ENST00000555301 C10orf95Q9H7T3 257 aa5.61□□□□□ -1.51
CHD8-208ENST00000555301 KMT2DO14686 5537 aa5.61□□□□□ -1.51
CHD8-208ENST00000555301 KRTAP8-1Q8IUC2 63 aa5.59□□□□□ -1.51
CHD8-208ENST00000555301 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
CHD8-208ENST00000555301 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
CHD8-208ENST00000555301 TNP1P09430 55 aa5.56□□□□□ -1.52
CHD8-208ENST00000555301 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
CHD8-208ENST00000555301 SPRR2FQ96RM1 72 aa5.48□□□□□ -1.53
CHD8-208ENST00000555301 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
CHD8-208ENST00000555301 MUC12Q9UKN1 5478 aa5.43□□□□□ -1.54
CHD8-208ENST00000555301 BRK1Q8WUW1 75 aa5.4□□□□□ -1.54
CHD8-208ENST00000555301 ROMO1P60602 79 aa5.38□□□□□ -1.55
CHD8-208ENST00000555301 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
CHD8-208ENST00000555301 MDN1Q9NU22 5596 aa5.34□□□□□ -1.55
CHD8-208ENST00000555301 NEBP20929 6669 aa5.34□□□□□ -1.56
CHD8-208ENST00000555301 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
CHD8-208ENST00000555301 SPRR2EP22531 72 aa5.31□□□□□ -1.56
CHD8-208ENST00000555301 SPRR2BP35325 72 aa5.31□□□□□ -1.56
CHD8-208ENST00000555301 SPRR2AP35326 72 aa5.31□□□□□ -1.56
CHD8-208ENST00000555301 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
CHD8-208ENST00000555301 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
CHD8-208ENST00000555301 MT1EP04732 61 aa5.28□□□□□ -1.56
CHD8-208ENST00000555301 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
CHD8-208ENST00000555301 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
CHD8-208ENST00000555301 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms