RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	LYRM7	Q5U5X0	104 aa		2.35	□□□□□ -2.03
PSMC6-208	ENST00000554956	LCA10	Q71F78	164 aa		2.35	□□□□□ -2.03
PSMC6-208	ENST00000554956	VPS25	Q9BRG1	176 aa		2.35	□□□□□ -2.03
PSMC6-208	ENST00000554956	TRAV7	A0A075B6U4	112 aa		2.34	□□□□□ -2.03
PSMC6-208	ENST00000554956	IGKV4-1	P06312	121 aa		2.34	□□□□□ -2.03
PSMC6-208	ENST00000554956	COX8A	P10176	69 aa		2.34	□□□□□ -2.03
PSMC6-208	ENST00000554956	SCGB1A1	P11684	91 aa		2.34	□□□□□ -2.03
PSMC6-208	ENST00000554956	LINC00472	Q9H8W2	130 aa		2.34	□□□□□ -2.03
PSMC6-208	ENST00000554956		P0C880	135 aa		2.33	□□□□□ -2.04
PSMC6-208	ENST00000554956	FABP2	P12104	132 aa		2.33	□□□□□ -2.04
PSMC6-208	ENST00000554956		H0YGX0	51 aa		2.32	□□□□□ -2.04
PSMC6-208	ENST00000554956		K7ERU9	68 aa		2.32	□□□□□ -2.04
PSMC6-208	ENST00000554956	LINC01554	Q52M75	96 aa		2.32	□□□□□ -2.04
PSMC6-208	ENST00000554956	IMUP	Q9GZP8	106 aa		2.32	□□□□□ -2.04
PSMC6-208	ENST00000554956	TRBV7-4	A0A0J9YYF1	115 aa		2.31	□□□□□ -2.04
PSMC6-208	ENST00000554956	FXYD2	P54710	66 aa		2.31	□□□□□ -2.04
PSMC6-208	ENST00000554956	SPINK7	P58062	85 aa		2.31	□□□□□ -2.04
PSMC6-208	ENST00000554956	KRTAP6-3	Q3LI67	103 aa		2.31	□□□□□ -2.04
PSMC6-208	ENST00000554956	KTN1-AS1	Q86SY8	53 aa		2.31	□□□□□ -2.04
PSMC6-208	ENST00000554956	RAB37	Q96AX2	223 aa		2.31	□□□□□ -2.04
PSMC6-208	ENST00000554956	SYNE2	Q8WXH0	6885 aa	Known RBP	2.31	□□□□□ -2.04
PSMC6-208	ENST00000554956	HIGD1B	Q9P298	99 aa		2.3	□□□□□ -2.04
PSMC6-208	ENST00000554956	MACF1	Q9UPN3	7388 aa	Known RBP	2.29	□□□□□ -2.04
PSMC6-208	ENST00000554956		A0A1B0GX51	115 aa		2.29	□□□□□ -2.04
PSMC6-208	ENST00000554956		K7ERJ3	54 aa		2.29	□□□□□ -2.04
PSMC6-208	ENST00000554956	ZCCHC13	Q8WW36	166 aa	Known RBP	2.29	□□□□□ -2.04
PSMC6-208	ENST00000554956	VAMP8	Q9BV40	100 aa		2.29	□□□□□ -2.04
PSMC6-208	ENST00000554956	UQCR10	Q9UDW1	63 aa		2.29	□□□□□ -2.04
PSMC6-208	ENST00000554956	PRO1854	Q9UHT4	67 aa		2.29	□□□□□ -2.04
PSMC6-208	ENST00000554956	TAX1BP3	O14907	124 aa		2.28	□□□□□ -2.04
PSMC6-208	ENST00000554956	CCK	P06307	115 aa		2.28	□□□□□ -2.04
PSMC6-208	ENST00000554956	TMEM258	P61165	79 aa		2.28	□□□□□ -2.04
PSMC6-208	ENST00000554956	SPATA45	Q537H7	98 aa		2.28	□□□□□ -2.04
PSMC6-208	ENST00000554956	SNCG	O76070	127 aa		2.27	□□□□□ -2.05
PSMC6-208	ENST00000554956	TRAC	P01848	142 aa		2.27	□□□□□ -2.05
PSMC6-208	ENST00000554956	WFDC13	Q8IUB5	93 aa		2.27	□□□□□ -2.05
PSMC6-208	ENST00000554956	ORMDL1	Q9P0S3	153 aa		2.27	□□□□□ -2.05
PSMC6-208	ENST00000554956	LINC00846	Q9NV44	126 aa		2.26	□□□□□ -2.05
PSMC6-208	ENST00000554956	PRO2289	Q9P1D8	64 aa		2.26	□□□□□ -2.05
PSMC6-208	ENST00000554956	TMEM256-PLSCR3	K7ERE1	68 aa		2.25	□□□□□ -2.05
PSMC6-208	ENST00000554956	GTF2H5	Q6ZYL4	71 aa		2.25	□□□□□ -2.05
PSMC6-208	ENST00000554956	IGKV3D-7	A0A0C4DH55	119 aa		2.24	□□□□□ -2.05
PSMC6-208	ENST00000554956	DNAL4	O96015	105 aa		2.24	□□□□□ -2.05
PSMC6-208	ENST00000554956	HSD52	Q0P140	79 aa		2.24	□□□□□ -2.05
PSMC6-208	ENST00000554956		Q6ZQT0	140 aa		2.24	□□□□□ -2.05
PSMC6-208	ENST00000554956		K7EP34	96 aa		2.23	□□□□□ -2.05
PSMC6-208	ENST00000554956	MT1B	P07438	61 aa		2.23	□□□□□ -2.05
PSMC6-208	ENST00000554956	KRTAP12-3	P60328	96 aa		2.23	□□□□□ -2.05
PSMC6-208	ENST00000554956	RBM3	P98179	157 aa	Known RBP	2.23	□□□□□ -2.05
PSMC6-208	ENST00000554956		J3QR89	54 aa		2.22	□□□□□ -2.05
PSMC6-208	ENST00000554956	BAALC-AS2	P0C853	105 aa		2.22	□□□□□ -2.05
PSMC6-208	ENST00000554956	H1FX-AS1	Q4G0G2	97 aa		2.22	□□□□□ -2.05
PSMC6-208	ENST00000554956		J3KT08	172 aa		2.21	□□□□□ -2.06
PSMC6-208	ENST00000554956	DSCR8	Q96T75	97 aa		2.21	□□□□□ -2.06
PSMC6-208	ENST00000554956	MUC12	Q9UKN1	5478 aa		2.21	□□□□□ -2.06
PSMC6-208	ENST00000554956	MMP24-AS1	A0A0U1RRL7	71 aa		2.2	□□□□□ -2.06
PSMC6-208	ENST00000554956		C9JAW5	83 aa		2.2	□□□□□ -2.06
PSMC6-208	ENST00000554956	COX6C	P09669	75 aa		2.2	□□□□□ -2.06
PSMC6-208	ENST00000554956	PRR15	Q8IV56	129 aa		2.2	□□□□□ -2.06
PSMC6-208	ENST00000554956		A0A1W2PPM0	123 aa		2.19	□□□□□ -2.06
PSMC6-208	ENST00000554956		A6NN06	94 aa		2.19	□□□□□ -2.06
PSMC6-208	ENST00000554956	NDUFB1	O75438	58 aa		2.19	□□□□□ -2.06
PSMC6-208	ENST00000554956	KRTAP20-1	Q3LI63	56 aa		2.19	□□□□□ -2.06
PSMC6-208	ENST00000554956	NAA38	Q9BRA0	125 aa	Known RBP	2.19	□□□□□ -2.06
PSMC6-208	ENST00000554956	SPCS1	Q9Y6A9	102 aa		2.19	□□□□□ -2.06
PSMC6-208	ENST00000554956	NEB	P20929	6669 aa		2.19	□□□□□ -2.06
PSMC6-208	ENST00000554956	LOC110117498	A0A087WWA1	95 aa		2.18	□□□□□ -2.06
PSMC6-208	ENST00000554956		F8W1H4	67 aa		2.18	□□□□□ -2.06
PSMC6-208	ENST00000554956	KRTAP19-8	Q3LI54	63 aa		2.18	□□□□□ -2.06
PSMC6-208	ENST00000554956	MRPL34	Q9BQ48	92 aa	Known RBP	2.18	□□□□□ -2.06
PSMC6-208	ENST00000554956	C14orf132	Q9NPU4	83 aa		2.18	□□□□□ -2.06
PSMC6-208	ENST00000554956		K7EQZ3	153 aa		2.17	□□□□□ -2.06
PSMC6-208	ENST00000554956	KRTAP12-4	P60329	112 aa		2.17	□□□□□ -2.06
PSMC6-208	ENST00000554956	TMEM254	Q8TBM7	123 aa		2.17	□□□□□ -2.06
PSMC6-208	ENST00000554956	KMT2D	O14686	5537 aa		2.17	□□□□□ -2.06
PSMC6-208	ENST00000554956	hDV103S1	A0JD37	113 aa		2.16	□□□□□ -2.06
PSMC6-208	ENST00000554956	C7orf65	Q6ZTY9	151 aa		2.16	□□□□□ -2.06
PSMC6-208	ENST00000554956	SPRR2G	Q9BYE4	73 aa		2.16	□□□□□ -2.06
PSMC6-208	ENST00000554956	MT-ATP8	P03928	68 aa		2.15	□□□□□ -2.07
PSMC6-208	ENST00000554956	NREP	Q16612	68 aa		2.15	□□□□□ -2.07
PSMC6-208	ENST00000554956		Q5VV11	94 aa		2.15	□□□□□ -2.07
PSMC6-208	ENST00000554956	JMJD7-PLA2G4B	H0Y9G9	81 aa		2.14	□□□□□ -2.07
PSMC6-208	ENST00000554956	CCDC179	H3BU77	68 aa		2.14	□□□□□ -2.07
PSMC6-208	ENST00000554956	ATXN8	Q156A1	80 aa		2.14	□□□□□ -2.07
PSMC6-208	ENST00000554956	ETDB	Q3ZM63	59 aa		2.14	□□□□□ -2.07
PSMC6-208	ENST00000554956	MDN1	Q9NU22	5596 aa		2.13	□□□□□ -2.07
PSMC6-208	ENST00000554956	FAM236A	A0A1B0GUQ0	79 aa		2.13	□□□□□ -2.07
PSMC6-208	ENST00000554956	FAM236B	A0A1B0GV22	79 aa		2.13	□□□□□ -2.07
PSMC6-208	ENST00000554956	RPS28	P62857	69 aa	Known RBP	2.13	□□□□□ -2.07
PSMC6-208	ENST00000554956	HCG22	E2RYF7	251 aa		2.12	□□□□□ -2.07
PSMC6-208	ENST00000554956	PDE6G	P18545	87 aa		2.12	□□□□□ -2.07
PSMC6-208	ENST00000554956		A0A087WVE0	104 aa		2.11	□□□□□ -2.07
PSMC6-208	ENST00000554956	KRTAP2-3	P0C7H8	128 aa		2.1	□□□□□ -2.07
PSMC6-208	ENST00000554956	KRTAP21-2	Q3LI59	83 aa		2.1	□□□□□ -2.07
PSMC6-208	ENST00000554956	CASC2	Q6XLA1	102 aa		2.1	□□□□□ -2.07
PSMC6-208	ENST00000554956	KRTAP2-4	Q9BYR9	128 aa		2.1	□□□□□ -2.07
PSMC6-208	ENST00000554956		S4R3F8	94 aa		2.1	□□□□□ -2.07
PSMC6-208	ENST00000554956	KLKP1	Q107X0	134 aa		2.09	□□□□□ -2.07
PSMC6-208	ENST00000554956	CSAG1	Q6PB30	78 aa		2.09	□□□□□ -2.07
PSMC6-208	ENST00000554956	UQCRQ	O14949	82 aa		2.08	□□□□□ -2.08

Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms