RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 FAT1Q14517 4588 aa2.91□□□□□ -1.94
LINC01550-204ENST00000554822 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.94
LINC01550-204ENST00000554822 A0A0U1RQV1 116 aa2.9□□□□□ -1.95
LINC01550-204ENST00000554822 NDUFS5O43920 106 aa2.9□□□□□ -1.95
LINC01550-204ENST00000554822 Q5XG85 94 aa2.9□□□□□ -1.95
LINC01550-204ENST00000554822 CASC2Q6XLA1 102 aa2.9□□□□□ -1.95
LINC01550-204ENST00000554822 TMEM254Q8TBM7 123 aa2.9□□□□□ -1.95
LINC01550-204ENST00000554822 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
LINC01550-204ENST00000554822 NEBP20929 6669 aa2.9□□□□□ -1.95
LINC01550-204ENST00000554822 MMP24-AS1A0A0U1RRL7 71 aa2.89□□□□□ -1.95
LINC01550-204ENST00000554822 PSPHP1O15172 72 aa2.89□□□□□ -1.95
LINC01550-204ENST00000554822 KRTAP13-2Q52LG2 175 aa2.89□□□□□ -1.95
LINC01550-204ENST00000554822 C5orf47Q569G3 176 aa2.89□□□□□ -1.95
LINC01550-204ENST00000554822 SPINK6Q6UWN8 80 aa2.89□□□□□ -1.95
LINC01550-204ENST00000554822 HRCT1Q6UXD1 115 aa2.89□□□□□ -1.95
LINC01550-204ENST00000554822 WFDC13Q8IUB5 93 aa2.88□□□□□ -1.95
LINC01550-204ENST00000554822 C8orf17Q9NRJ1 99 aa2.88□□□□□ -1.95
LINC01550-204ENST00000554822 SNURFQ9Y675 71 aa2.88□□□□□ -1.95
LINC01550-204ENST00000554822 hDV103S1A0JD37 113 aa2.87□□□□□ -1.95
LINC01550-204ENST00000554822 H3BPC8 53 aa2.87□□□□□ -1.95
LINC01550-204ENST00000554822 ZCCHC13Q8WW36 166 aaKnown RBP2.87□□□□□ -1.95
LINC01550-204ENST00000554822 LIMD2Q9BT23 127 aa2.87□□□□□ -1.95
LINC01550-204ENST00000554822 SYNE2Q8WXH0 6885 aaKnown RBP2.86□□□□□ -1.95
LINC01550-204ENST00000554822 MP68P56378 58 aa2.86□□□□□ -1.95
LINC01550-204ENST00000554822 TP53AIP1Q9HCN2 124 aa2.86□□□□□ -1.95
LINC01550-204ENST00000554822 PRO0628Q9UI54 55 aa2.86□□□□□ -1.95
LINC01550-204ENST00000554822 IGHV6-1A0A0B4J1U7 121 aa2.85□□□□□ -1.95
LINC01550-204ENST00000554822 C8orf87E5RJ46 101 aa2.85□□□□□ -1.95
LINC01550-204ENST00000554822 SPINK1P00995 79 aa2.85□□□□□ -1.95
LINC01550-204ENST00000554822 KRTAP10-4P60372 401 aaPredicted RBP2.85□□□□□ -1.95
LINC01550-204ENST00000554822 RPS29P62273 56 aaKnown RBP2.85□□□□□ -1.95
LINC01550-204ENST00000554822 C1orf195Q5TG92 126 aa2.84□□□□□ -1.95
LINC01550-204ENST00000554822 SPAG11AQ6PDA7 123 aa2.84□□□□□ -1.95
LINC01550-204ENST00000554822 MRPL34Q9BQ48 92 aaKnown RBP2.84□□□□□ -1.95
LINC01550-204ENST00000554822 TRAV22A0A0B4J277 110 aa2.83□□□□□ -1.96
LINC01550-204ENST00000554822 H0Y9P7 68 aa2.83□□□□□ -1.96
LINC01550-204ENST00000554822 SMR3BP02814 79 aaPredicted RBP2.83□□□□□ -1.96
LINC01550-204ENST00000554822 C4orf26Q17RF5 130 aa2.83□□□□□ -1.96
LINC01550-204ENST00000554822 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
LINC01550-204ENST00000554822 LINC00208Q96KT6 92 aa2.83□□□□□ -1.96
LINC01550-204ENST00000554822 CYP4F30PQ9H0H9 118 aa2.83□□□□□ -1.96
LINC01550-204ENST00000554822 VPS13BQ7Z7G8 4022 aa2.81□□□□□ -1.96
LINC01550-204ENST00000554822 LINC00313P59037 77 aa2.81□□□□□ -1.96
LINC01550-204ENST00000554822 FP248Q71RG6 208 aaPredicted RBP2.81□□□□□ -1.96
LINC01550-204ENST00000554822 LINC00304Q8N9R0 145 aa2.81□□□□□ -1.96
LINC01550-204ENST00000554822 SPANXA2-OT1Q8N9U9 137 aa2.81□□□□□ -1.96
LINC01550-204ENST00000554822 C1orf64Q8NEQ6 169 aa2.81□□□□□ -1.96
LINC01550-204ENST00000554822 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
LINC01550-204ENST00000554822 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
LINC01550-204ENST00000554822 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
LINC01550-204ENST00000554822 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
LINC01550-204ENST00000554822 LOC101927531A0A1B0GV80 90 aa2.78□□□□□ -1.96
LINC01550-204ENST00000554822 Q1T7F1 81 aa2.78□□□□□ -1.96
LINC01550-204ENST00000554822 PKHD1L1Q86WI1 4243 aa2.78□□□□□ -1.96
LINC01550-204ENST00000554822 Q5W150 140 aa2.77□□□□□ -1.97
LINC01550-204ENST00000554822 Q5VSD8 79 aa2.75□□□□□ -1.97
LINC01550-204ENST00000554822 PCOTHQ58A44 107 aa2.73□□□□□ -1.97
LINC01550-204ENST00000554822 RBM12B-AS1Q9P1G2 102 aa2.73□□□□□ -1.97
LINC01550-204ENST00000554822 LRP1Q07954 4544 aaKnown RBP2.72□□□□□ -1.97
LINC01550-204ENST00000554822 A8MUU9 505 aa2.71□□□□□ -1.98
LINC01550-204ENST00000554822 C20orf166-AS1Q96NR2 134 aa2.71□□□□□ -1.98
LINC01550-204ENST00000554822 FAT3Q8TDW7 4589 aa2.7□□□□□ -1.98
LINC01550-204ENST00000554822 COA5Q86WW8 74 aa2.7□□□□□ -1.98
LINC01550-204ENST00000554822 BRK1Q8WUW1 75 aa2.7□□□□□ -1.98
LINC01550-204ENST00000554822 MACF1Q9UPN3 7388 aaKnown RBP2.7□□□□□ -1.98
LINC01550-204ENST00000554822 K7ERS5 55 aa2.69□□□□□ -1.98
LINC01550-204ENST00000554822 HRES1P13985 223 aa2.69□□□□□ -1.98
LINC01550-204ENST00000554822 DMAC1Q96GE9 116 aa2.69□□□□□ -1.98
LINC01550-204ENST00000554822 C9orf92A6NGG3 77 aa2.68□□□□□ -1.98
LINC01550-204ENST00000554822 ACYP2P14621 99 aa2.68□□□□□ -1.98
LINC01550-204ENST00000554822 C7orf65Q6ZTY9 151 aa2.68□□□□□ -1.98
LINC01550-204ENST00000554822 RETNLBQ9BQ08 111 aa2.68□□□□□ -1.98
LINC01550-204ENST00000554822 TNXBP22105 4242 aa2.67□□□□□ -1.98
LINC01550-204ENST00000554822 MT1HL1P0DM35 61 aa2.67□□□□□ -1.98
LINC01550-204ENST00000554822 Q5VV11 94 aa2.67□□□□□ -1.98
LINC01550-204ENST00000554822 LINC01558Q9Y6Z2 57 aa2.66□□□□□ -1.98
LINC01550-204ENST00000554822 A8MUN3 132 aa2.65□□□□□ -1.99
LINC01550-204ENST00000554822 KRTAP10-10P60014 251 aa2.65□□□□□ -1.99
LINC01550-204ENST00000554822 USH2AO75445 5202 aa2.63□□□□□ -1.99
LINC01550-204ENST00000554822 CHKB-CPT1BH3BT56 60 aa2.63□□□□□ -1.99
LINC01550-204ENST00000554822 RPL37P61927 97 aaKnown RBP2.63□□□□□ -1.99
LINC01550-204ENST00000554822 PRR15LQ9BU68 103 aa2.63□□□□□ -1.99
LINC01550-204ENST00000554822 SPINK7P58062 85 aa2.62□□□□□ -1.99
LINC01550-204ENST00000554822 SPINT4Q6UDR6 99 aa2.62□□□□□ -1.99
LINC01550-204ENST00000554822 ATP11AUNQ6ZP68 121 aa2.62□□□□□ -1.99
LINC01550-204ENST00000554822 FCGBPQ9Y6R7 5405 aaPredicted RBP2.62□□□□□ -1.99
LINC01550-204ENST00000554822 A6NED7 52 aa2.61□□□□□ -1.99
LINC01550-204ENST00000554822 TPRXLQ17RH7 258 aa2.61□□□□□ -1.99
LINC01550-204ENST00000554822 CDC42SE1Q9NRR8 79 aa2.61□□□□□ -1.99
LINC01550-204ENST00000554822 KMT2DO14686 5537 aa2.6□□□□□ -1.99
LINC01550-204ENST00000554822 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
LINC01550-204ENST00000554822 PMAIP1Q13794 54 aa2.59□□□□□ -1.99
LINC01550-204ENST00000554822 KRTAP6-3Q3LI67 103 aa2.59□□□□□ -1.99
LINC01550-204ENST00000554822 COX6B2Q6YFQ2 88 aa2.59□□□□□ -1.99
LINC01550-204ENST00000554822 LCA10Q71F78 164 aa2.58□□□□□ -2
LINC01550-204ENST00000554822 SPTSSBQ8NFR3 76 aa2.58□□□□□ -2
LINC01550-204ENST00000554822 A0A1B0GU69 56 aa2.55□□□□□ -2
LINC01550-204ENST00000554822 MUC12Q9UKN1 5478 aa2.54□□□□□ -2
LINC01550-204ENST00000554822 A6NN06 94 aa2.54□□□□□ -2
LINC01550-204ENST00000554822 KTN1-AS1Q86SY8 53 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms