RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 AEBP2Q6ZN18 517 aaPredicted RBP26.54■■□□□ 1.84
LINC01550-204ENST00000554822 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
LINC01550-204ENST00000554822 PHF23Q9BUL5 403 aaPredicted RBP22.7■■□□□ 1.22
LINC01550-204ENST00000554822 SENP3Q9H4L4 574 aaPredicted RBP22.48■■□□□ 1.19
LINC01550-204ENST00000554822 FOXD1Q16676 465 aa20.92■□□□□ 0.94
LINC01550-204ENST00000554822 PLPPR3Q6T4P5 718 aa20.87■□□□□ 0.93
LINC01550-204ENST00000554822 PPP6R1Q9UPN7 881 aa20.07■□□□□ 0.8
LINC01550-204ENST00000554822 ADRA2BP18089 450 aa20.05■□□□□ 0.8
LINC01550-204ENST00000554822 PIAS4Q8N2W9 510 aaPredicted RBP19.69■□□□□ 0.74
LINC01550-204ENST00000554822 MSH5O43196 834 aa19.42■□□□□ 0.7
LINC01550-204ENST00000554822 POTEDQ86YR6 584 aa18.77■□□□□ 0.6
LINC01550-204ENST00000554822 PPP4R3CPQ6ZMV5 832 aa18.4■□□□□ 0.54
LINC01550-204ENST00000554822 SCAF1Q9H7N4 1312 aaKnown RBP18.28■□□□□ 0.52
LINC01550-204ENST00000554822 MAPK8IP2Q13387 824 aaPredicted RBP18.25■□□□□ 0.51
LINC01550-204ENST00000554822 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
LINC01550-204ENST00000554822 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
LINC01550-204ENST00000554822 KCNA4P22459 653 aa17.88■□□□□ 0.45
LINC01550-204ENST00000554822 NCBP3Q53F19 620 aaKnown RBP17.85■□□□□ 0.45
LINC01550-204ENST00000554822 NPM3O75607 178 aaKnown RBP17.64■□□□□ 0.41
LINC01550-204ENST00000554822 RNF216Q9NWF9 866 aaPredicted RBP17.56■□□□□ 0.4
LINC01550-204ENST00000554822 HOXD11P31277 338 aaPredicted RBP17.52■□□□□ 0.4
LINC01550-204ENST00000554822 DCAF8L1A6NGE4 600 aa17.22■□□□□ 0.35
LINC01550-204ENST00000554822 DNAJC5BQ9UF47 199 aa17.05■□□□□ 0.32
LINC01550-204ENST00000554822 SLC4A1APQ9BWU0 796 aaKnown RBP16.98■□□□□ 0.31
LINC01550-204ENST00000554822 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.27
LINC01550-204ENST00000554822 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
LINC01550-204ENST00000554822 CACNB1Q02641 598 aaPredicted RBP16.63■□□□□ 0.25
LINC01550-204ENST00000554822 RNF39Q9H2S5 420 aa16.62■□□□□ 0.25
LINC01550-204ENST00000554822 ZBTB22O15209 634 aa16.46■□□□□ 0.23
LINC01550-204ENST00000554822 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
LINC01550-204ENST00000554822 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
LINC01550-204ENST00000554822 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
LINC01550-204ENST00000554822 C1QBPQ07021 282 aaKnown RBP16.35■□□□□ 0.21
LINC01550-204ENST00000554822 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.2
LINC01550-204ENST00000554822 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
LINC01550-204ENST00000554822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.14■□□□□ 0.17
LINC01550-204ENST00000554822 HNRNPUL2Q1KMD3 747 aaKnown RBP16.14■□□□□ 0.17
LINC01550-204ENST00000554822 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
LINC01550-204ENST00000554822 SPINK5Q9NQ38 1064 aaPredicted RBP16.04■□□□□ 0.16
LINC01550-204ENST00000554822 APLP2Q06481 763 aa15.98■□□□□ 0.15
LINC01550-204ENST00000554822 CAPN15O75808 1086 aa15.97■□□□□ 0.15
LINC01550-204ENST00000554822 ATF5Q9Y2D1 282 aaPredicted RBP15.91■□□□□ 0.14
LINC01550-204ENST00000554822 TRHP20396 242 aaPredicted RBP15.89■□□□□ 0.13
LINC01550-204ENST00000554822 ATXN8OSP0DMR3 200 aa15.85■□□□□ 0.13
LINC01550-204ENST00000554822 ZNF219Q9P2Y4 722 aaPredicted RBP15.81■□□□□ 0.12
LINC01550-204ENST00000554822 DSG3P32926 999 aa15.71■□□□□ 0.11
LINC01550-204ENST00000554822 ABCB7O75027 752 aa15.68■□□□□ 0.1
LINC01550-204ENST00000554822 POLA2Q14181 598 aa15.59■□□□□ 0.09
LINC01550-204ENST00000554822 ZBTB12Q9Y330 459 aaPredicted RBP15.25■□□□□ 0.03
LINC01550-204ENST00000554822 FBLN2P98095 1184 aa15.18■□□□□ 0.02
LINC01550-204ENST00000554822 MKRN4PQ13434 485 aaPredicted RBP15.18■□□□□ 0.02
LINC01550-204ENST00000554822 OSCARQ8IYS5 282 aa15.06■□□□□ 0
LINC01550-204ENST00000554822 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
LINC01550-204ENST00000554822 SPDYE2BA6NHP3 402 aa14.85□□□□□ -0.03
LINC01550-204ENST00000554822 SPDYE6P0CI01 402 aa14.85□□□□□ -0.03
LINC01550-204ENST00000554822 SPDYE2Q495Y8 402 aa14.85□□□□□ -0.03
LINC01550-204ENST00000554822 ZNF692Q9BU19 519 aaPredicted RBP14.82□□□□□ -0.04
LINC01550-204ENST00000554822 SPDYE4A6NLX3 237 aa14.79□□□□□ -0.04
LINC01550-204ENST00000554822 AKT1S1Q96B36 256 aa14.74□□□□□ -0.05
LINC01550-204ENST00000554822 POTEHQ6S545 545 aa14.73□□□□□ -0.05
LINC01550-204ENST00000554822 SSUH2Q9Y2M2 353 aa14.73□□□□□ -0.05
LINC01550-204ENST00000554822 FKBP8Q14318 412 aa14.72□□□□□ -0.05
LINC01550-204ENST00000554822 PABPN1Q86U42 306 aaKnown RBP eCLIP14.63□□□□□ -0.07
LINC01550-204ENST00000554822 REM2Q8IYK8 340 aaPredicted RBP14.63□□□□□ -0.07
LINC01550-204ENST00000554822 CHRDL2Q6WN34 429 aa14.52□□□□□ -0.09
LINC01550-204ENST00000554822 PROM2Q8N271 834 aa14.48□□□□□ -0.09
LINC01550-204ENST00000554822 PITPNM1O00562 1244 aa14.47□□□□□ -0.09
LINC01550-204ENST00000554822 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
LINC01550-204ENST00000554822 CLEC11AQ9Y240 323 aa14.44□□□□□ -0.1
LINC01550-204ENST00000554822 STAG3Q9UJ98 1225 aa14.31□□□□□ -0.12
LINC01550-204ENST00000554822 PRR29P0C7W0 189 aa14.28□□□□□ -0.12
LINC01550-204ENST00000554822 PIP4P2Q8N4L2 257 aa14.22□□□□□ -0.13
LINC01550-204ENST00000554822 FXR2P51116 673 aaKnown RBP eCLIP14.2□□□□□ -0.14
LINC01550-204ENST00000554822 FBXO3Q9UK99 471 aa14.16□□□□□ -0.14
LINC01550-204ENST00000554822 PRKAR2AP13861 404 aaKnown RBP14.11□□□□□ -0.15
LINC01550-204ENST00000554822 CHADLQ6NUI6 762 aa14.11□□□□□ -0.15
LINC01550-204ENST00000554822 CREBZFQ9NS37 354 aa14.07□□□□□ -0.16
LINC01550-204ENST00000554822 MIER1Q8N108 512 aa14.04□□□□□ -0.16
LINC01550-204ENST00000554822 VASPP50552 380 aaPredicted RBP14□□□□□ -0.17
LINC01550-204ENST00000554822 PLCD3Q8N3E9 789 aa14□□□□□ -0.17
LINC01550-204ENST00000554822 HAX1O00165 279 aa13.93□□□□□ -0.18
LINC01550-204ENST00000554822 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
LINC01550-204ENST00000554822 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
LINC01550-204ENST00000554822 MNX1P50219 401 aaPredicted RBP13.9□□□□□ -0.18
LINC01550-204ENST00000554822 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
LINC01550-204ENST00000554822 IFNLR1Q8IU57 520 aaPredicted RBP13.84□□□□□ -0.19
LINC01550-204ENST00000554822 KLHL34Q8N239 644 aa13.82□□□□□ -0.2
LINC01550-204ENST00000554822 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC01550-204ENST00000554822 EVX2Q03828 476 aa13.8□□□□□ -0.2
LINC01550-204ENST00000554822 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
LINC01550-204ENST00000554822 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
LINC01550-204ENST00000554822 CD44P16070 742 aaKnown RBP13.69□□□□□ -0.22
LINC01550-204ENST00000554822 NUBP1P53384 320 aa13.68□□□□□ -0.22
LINC01550-204ENST00000554822 RASEFQ8IZ41 740 aa13.67□□□□□ -0.22
LINC01550-204ENST00000554822 SPOCK2Q92563 424 aa13.66□□□□□ -0.22
LINC01550-204ENST00000554822 TSPYL2Q9H2G4 693 aaPredicted RBP13.63□□□□□ -0.23
LINC01550-204ENST00000554822 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
LINC01550-204ENST00000554822 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
LINC01550-204ENST00000554822 DCAF8Q5TAQ9 597 aa13.56□□□□□ -0.24
LINC01550-204ENST00000554822 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms