RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 C4orf26Q17RF5 130 aa3.56□□□□□ -1.84
LINC00640-201ENST00000554409 USH2AO75445 5202 aa3.55□□□□□ -1.84
LINC00640-201ENST00000554409 FAM240AA0A1B0GVK7 77 aa3.55□□□□□ -1.84
LINC00640-201ENST00000554409 ATP5EP2Q5VTU8 51 aa3.54□□□□□ -1.84
LINC00640-201ENST00000554409 SVIPQ8NHG7 77 aa3.53□□□□□ -1.84
LINC00640-201ENST00000554409 C1orf64Q8NEQ6 169 aa3.51□□□□□ -1.85
LINC00640-201ENST00000554409 TRAV22A0A0B4J277 110 aa3.5□□□□□ -1.85
LINC00640-201ENST00000554409 IMUPQ9GZP8 106 aa3.5□□□□□ -1.85
LINC00640-201ENST00000554409 S4R3F8 94 aa3.5□□□□□ -1.85
LINC00640-201ENST00000554409 MT-ATP8P03928 68 aa3.49□□□□□ -1.85
LINC00640-201ENST00000554409 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
LINC00640-201ENST00000554409 CYP4F30PQ9H0H9 118 aa3.49□□□□□ -1.85
LINC00640-201ENST00000554409 SSPOA2VEC9 5147 aa3.49□□□□□ -1.85
LINC00640-201ENST00000554409 LOC101927531A0A1B0GV80 90 aa3.48□□□□□ -1.85
LINC00640-201ENST00000554409 C5orf47Q569G3 176 aa3.48□□□□□ -1.85
LINC00640-201ENST00000554409 ANAPC13Q9BS18 74 aa3.48□□□□□ -1.85
LINC00640-201ENST00000554409 HIST1H4AP62805 103 aaKnown RBP3.47□□□□□ -1.85
LINC00640-201ENST00000554409 CSAG1Q6PB30 78 aa3.47□□□□□ -1.85
LINC00640-201ENST00000554409 LCA10Q71F78 164 aa3.47□□□□□ -1.85
LINC00640-201ENST00000554409 UQCRQO14949 82 aa3.46□□□□□ -1.86
LINC00640-201ENST00000554409 LINC00643Q86TS7 51 aa3.46□□□□□ -1.86
LINC00640-201ENST00000554409 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
LINC00640-201ENST00000554409 ATOX1O00244 68 aa3.45□□□□□ -1.86
LINC00640-201ENST00000554409 A0A087WVE0 104 aa3.43□□□□□ -1.86
LINC00640-201ENST00000554409 FAM236AA0A1B0GUQ0 79 aa3.43□□□□□ -1.86
LINC00640-201ENST00000554409 FAM236BA0A1B0GV22 79 aa3.43□□□□□ -1.86
LINC00640-201ENST00000554409 H0Y9P7 68 aa3.43□□□□□ -1.86
LINC00640-201ENST00000554409 SPRR2GQ9BYE4 73 aa3.41□□□□□ -1.86
LINC00640-201ENST00000554409 A8MUN3 132 aa3.39□□□□□ -1.87
LINC00640-201ENST00000554409 KLKP1Q107X0 134 aa3.39□□□□□ -1.87
LINC00640-201ENST00000554409 OCR1Q9BZK8 76 aa3.39□□□□□ -1.87
LINC00640-201ENST00000554409 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
LINC00640-201ENST00000554409 KRTAP19-8Q3LI54 63 aa3.38□□□□□ -1.87
LINC00640-201ENST00000554409 LINC00208Q96KT6 92 aa3.38□□□□□ -1.87
LINC00640-201ENST00000554409 CCDC179H3BU77 68 aa3.37□□□□□ -1.87
LINC00640-201ENST00000554409 MT1BP07438 61 aa3.37□□□□□ -1.87
LINC00640-201ENST00000554409 MP68P56378 58 aa3.37□□□□□ -1.87
LINC00640-201ENST00000554409 H0YAA0 97 aa3.36□□□□□ -1.87
LINC00640-201ENST00000554409 NDUFC1O43677 76 aa3.36□□□□□ -1.87
LINC00640-201ENST00000554409 RPS28P62857 69 aaKnown RBP3.36□□□□□ -1.87
LINC00640-201ENST00000554409 Q5VV11 94 aa3.36□□□□□ -1.87
LINC00640-201ENST00000554409 CRIPTQ9P021 101 aa3.36□□□□□ -1.87
LINC00640-201ENST00000554409 H3BPC8 53 aa3.35□□□□□ -1.87
LINC00640-201ENST00000554409 COX7CP15954 63 aa3.35□□□□□ -1.87
LINC00640-201ENST00000554409 A0A0A0MQY5 61 aa3.34□□□□□ -1.87
LINC00640-201ENST00000554409 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
LINC00640-201ENST00000554409 MT3P25713 68 aa3.32□□□□□ -1.88
LINC00640-201ENST00000554409 TMEM258P61165 79 aa3.32□□□□□ -1.88
LINC00640-201ENST00000554409 SMIM20Q8N5G0 67 aa3.32□□□□□ -1.88
LINC00640-201ENST00000554409 SERP2Q8N6R1 65 aa3.32□□□□□ -1.88
LINC00640-201ENST00000554409 A6NN06 94 aa3.31□□□□□ -1.88
LINC00640-201ENST00000554409 KRTAP10-5P60370 271 aa3.3□□□□□ -1.88
LINC00640-201ENST00000554409 KRTAP6-3Q3LI67 103 aa3.3□□□□□ -1.88
LINC00640-201ENST00000554409 SYNE2Q8WXH0 6885 aaKnown RBP3.3□□□□□ -1.88
LINC00640-201ENST00000554409 DMAC1Q96GE9 116 aa3.29□□□□□ -1.88
LINC00640-201ENST00000554409 ADM2Q7Z4H4 148 aa3.28□□□□□ -1.88
LINC00640-201ENST00000554409 TRAV7A0A075B6U4 112 aa3.25□□□□□ -1.89
LINC00640-201ENST00000554409 ATP5EP56381 51 aaPredicted RBP3.24□□□□□ -1.89
LINC00640-201ENST00000554409 C20orf197Q8N268 126 aa3.23□□□□□ -1.89
LINC00640-201ENST00000554409 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
LINC00640-201ENST00000554409 P0C880 135 aa3.21□□□□□ -1.9
LINC00640-201ENST00000554409 SERP1Q9Y6X1 66 aa3.21□□□□□ -1.9
LINC00640-201ENST00000554409 ACYP2P14621 99 aa3.2□□□□□ -1.9
LINC00640-201ENST00000554409 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
LINC00640-201ENST00000554409 R4GN34 69 aa3.2□□□□□ -1.9
LINC00640-201ENST00000554409 H7BZZ5 65 aa3.19□□□□□ -1.9
LINC00640-201ENST00000554409 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
LINC00640-201ENST00000554409 PLAC4Q8WY50 150 aa3.18□□□□□ -1.9
LINC00640-201ENST00000554409 CYSTM1Q9H1C7 97 aa3.18□□□□□ -1.9
LINC00640-201ENST00000554409 PRO2289Q9P1D8 64 aa3.18□□□□□ -1.9
LINC00640-201ENST00000554409 SMIM26A0A096LP01 95 aa3.17□□□□□ -1.9
LINC00640-201ENST00000554409 M0QZ58 72 aa3.17□□□□□ -1.9
LINC00640-201ENST00000554409 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
LINC00640-201ENST00000554409 MT1XP80297 61 aa3.17□□□□□ -1.9
LINC00640-201ENST00000554409 SPTSSBQ8NFR3 76 aa3.17□□□□□ -1.9
LINC00640-201ENST00000554409 SNURFQ9Y675 71 aa3.15□□□□□ -1.91
LINC00640-201ENST00000554409 SPANXA2-OT1Q8N9U9 137 aa3.14□□□□□ -1.91
LINC00640-201ENST00000554409 NEBP20929 6669 aa3.13□□□□□ -1.91
LINC00640-201ENST00000554409 CHKB-CPT1BH3BT56 60 aa3.12□□□□□ -1.91
LINC00640-201ENST00000554409 PRO0628Q9UI54 55 aa3.12□□□□□ -1.91
LINC00640-201ENST00000554409 KRTAP12-2P59991 146 aa3.11□□□□□ -1.91
LINC00640-201ENST00000554409 LINC01554Q52M75 96 aa3.11□□□□□ -1.91
LINC00640-201ENST00000554409 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
LINC00640-201ENST00000554409 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
LINC00640-201ENST00000554409 Q1T7F1 81 aa3.05□□□□□ -1.92
LINC00640-201ENST00000554409 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
LINC00640-201ENST00000554409 V9GYY9 64 aa3.05□□□□□ -1.92
LINC00640-201ENST00000554409 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
LINC00640-201ENST00000554409 KMT2DO14686 5537 aa3.03□□□□□ -1.92
LINC00640-201ENST00000554409 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.92
LINC00640-201ENST00000554409 COA5Q86WW8 74 aa3.03□□□□□ -1.92
LINC00640-201ENST00000554409 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
LINC00640-201ENST00000554409 KRTAP13-4Q3LI77 160 aa3.01□□□□□ -1.93
LINC00640-201ENST00000554409 SPRR2EP22531 72 aa3□□□□□ -1.93
LINC00640-201ENST00000554409 SPRR2BP35325 72 aa3□□□□□ -1.93
LINC00640-201ENST00000554409 SPRR2AP35326 72 aa3□□□□□ -1.93
LINC00640-201ENST00000554409 BRK1Q8WUW1 75 aa2.99□□□□□ -1.93
LINC00640-201ENST00000554409 MDN1Q9NU22 5596 aa2.97□□□□□ -1.93
LINC00640-201ENST00000554409 SEC61GP60059 68 aa2.97□□□□□ -1.93
LINC00640-201ENST00000554409 KRTAP2-3P0C7H8 128 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms