RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 CSAG1Q6PB30 78 aa7.9□□□□□ -1.14
PPP4R3A-201ENST00000554308 MT1HL1P0DM35 61 aa7.88□□□□□ -1.15
PPP4R3A-201ENST00000554308 C20orf166-AS1Q96NR2 134 aa7.88□□□□□ -1.15
PPP4R3A-201ENST00000554308 KRTAP4-5Q9BYR2 181 aa7.88□□□□□ -1.15
PPP4R3A-201ENST00000554308 A8MUU9 505 aa7.87□□□□□ -1.15
PPP4R3A-201ENST00000554308 H0YAA0 97 aa7.83□□□□□ -1.16
PPP4R3A-201ENST00000554308 ABCA13Q86UQ4 5058 aa7.81□□□□□ -1.16
PPP4R3A-201ENST00000554308 KRTAP3-1Q9BYR8 98 aa7.79□□□□□ -1.16
PPP4R3A-201ENST00000554308 HERC2O95714 4834 aa7.73□□□□□ -1.17
PPP4R3A-201ENST00000554308 XP32Q5T750 250 aa7.72□□□□□ -1.17
PPP4R3A-201ENST00000554308 A0A1B0GU33 70 aa7.7□□□□□ -1.18
PPP4R3A-201ENST00000554308 LPAP08519 4548 aa7.7□□□□□ -1.18
PPP4R3A-201ENST00000554308 LRP2P98164 4655 aa7.69□□□□□ -1.18
PPP4R3A-201ENST00000554308 RPL37P61927 97 aaKnown RBP7.67□□□□□ -1.18
PPP4R3A-201ENST00000554308 H1FX-AS1Q4G0G2 97 aa7.67□□□□□ -1.18
PPP4R3A-201ENST00000554308 BIRC6Q9NR09 4857 aa7.63□□□□□ -1.19
PPP4R3A-201ENST00000554308 CRIPTQ9P021 101 aa7.61□□□□□ -1.19
PPP4R3A-201ENST00000554308 J3QL48 77 aa7.6□□□□□ -1.19
PPP4R3A-201ENST00000554308 KRTAP25-1Q3LHN0 102 aa7.6□□□□□ -1.19
PPP4R3A-201ENST00000554308 TPRXLQ17RH7 258 aa7.56□□□□□ -1.2
PPP4R3A-201ENST00000554308 COX6B2Q6YFQ2 88 aa7.55□□□□□ -1.2
PPP4R3A-201ENST00000554308 H3BS24 57 aa7.53□□□□□ -1.2
PPP4R3A-201ENST00000554308 PCLOQ9Y6V0 5065 aa7.5□□□□□ -1.21
PPP4R3A-201ENST00000554308 HERC1Q15751 4861 aa7.46□□□□□ -1.21
PPP4R3A-201ENST00000554308 KRTAP13-4Q3LI77 160 aa7.44□□□□□ -1.22
PPP4R3A-201ENST00000554308 ROMO1P60602 79 aa7.44□□□□□ -1.22
PPP4R3A-201ENST00000554308 K7ERS5 55 aa7.43□□□□□ -1.22
PPP4R3A-201ENST00000554308 KRTAP10-6P60371 365 aaPredicted RBP7.43□□□□□ -1.22
PPP4R3A-201ENST00000554308 KRTAP3-3Q9BYR6 98 aa7.42□□□□□ -1.22
PPP4R3A-201ENST00000554308 A0A0D9SG42 100 aa7.42□□□□□ -1.22
PPP4R3A-201ENST00000554308 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
PPP4R3A-201ENST00000554308 MUC2Q02817 5179 aa7.36□□□□□ -1.23
PPP4R3A-201ENST00000554308 SEC61BP60468 96 aaKnown RBP7.31□□□□□ -1.24
PPP4R3A-201ENST00000554308 S4R3F8 94 aa7.3□□□□□ -1.24
PPP4R3A-201ENST00000554308 P0C880 135 aa7.3□□□□□ -1.24
PPP4R3A-201ENST00000554308 C10orf95Q9H7T3 257 aa7.27□□□□□ -1.25
PPP4R3A-201ENST00000554308 MUC17Q685J3 4493 aa7.26□□□□□ -1.25
PPP4R3A-201ENST00000554308 KRTAP4-1Q9BYQ7 146 aa7.24□□□□□ -1.25
PPP4R3A-201ENST00000554308 HMCN2Q8NDA2 5059 aa7.22□□□□□ -1.25
PPP4R3A-201ENST00000554308 KRTAP12-2P59991 146 aa7.2□□□□□ -1.26
PPP4R3A-201ENST00000554308 SPINT4Q6UDR6 99 aa7.16□□□□□ -1.26
PPP4R3A-201ENST00000554308 KRTAP12-1P59990 96 aa7.09□□□□□ -1.27
PPP4R3A-201ENST00000554308 RNF213Q63HN8 5207 aa7.05□□□□□ -1.28
PPP4R3A-201ENST00000554308 UBR4Q5T4S7 5183 aa7.02□□□□□ -1.29
PPP4R3A-201ENST00000554308 KRTAP15-1Q3LI76 137 aa7□□□□□ -1.29
PPP4R3A-201ENST00000554308 KRTAP19-2Q3LHN2 52 aa6.99□□□□□ -1.29
PPP4R3A-201ENST00000554308 FAT4Q6V0I7 4981 aa6.98□□□□□ -1.29
PPP4R3A-201ENST00000554308 NDUFAF8A1L188 74 aa6.95□□□□□ -1.3
PPP4R3A-201ENST00000554308 FLGP20930 4061 aaPredicted RBP6.92□□□□□ -1.3
PPP4R3A-201ENST00000554308 M0QZ58 72 aa6.9□□□□□ -1.31
PPP4R3A-201ENST00000554308 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
PPP4R3A-201ENST00000554308 R4GN34 69 aa6.8□□□□□ -1.32
PPP4R3A-201ENST00000554308 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
PPP4R3A-201ENST00000554308 LCE2CQ5TA81 110 aa6.77□□□□□ -1.33
PPP4R3A-201ENST00000554308 M0R2T5 61 aa6.7□□□□□ -1.34
PPP4R3A-201ENST00000554308 MT1HP80294 61 aa6.62□□□□□ -1.35
PPP4R3A-201ENST00000554308 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
PPP4R3A-201ENST00000554308 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.38
PPP4R3A-201ENST00000554308 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
PPP4R3A-201ENST00000554308 MT2AP02795 61 aa6.41□□□□□ -1.38
PPP4R3A-201ENST00000554308 KRTAP9-8Q9BYQ0 159 aa6.41□□□□□ -1.38
PPP4R3A-201ENST00000554308 MT1FP04733 61 aa6.41□□□□□ -1.38
PPP4R3A-201ENST00000554308 KRTAP19-1Q8IUB9 90 aa6.37□□□□□ -1.39
PPP4R3A-201ENST00000554308 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
PPP4R3A-201ENST00000554308 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
PPP4R3A-201ENST00000554308 LUZP6Q538Z0 58 aa6.27□□□□□ -1.41
PPP4R3A-201ENST00000554308 TNP1P09430 55 aa6.2□□□□□ -1.42
PPP4R3A-201ENST00000554308 LCE2AQ5TA79 106 aaPredicted RBP6.16□□□□□ -1.42
PPP4R3A-201ENST00000554308 KRTAP9-3Q9BYQ3 159 aa6.16□□□□□ -1.42
PPP4R3A-201ENST00000554308 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
PPP4R3A-201ENST00000554308 USH2AO75445 5202 aa6.1□□□□□ -1.43
PPP4R3A-201ENST00000554308 MT1BP07438 61 aa6.08□□□□□ -1.44
PPP4R3A-201ENST00000554308 A0A0A0MQY5 61 aa6.07□□□□□ -1.44
PPP4R3A-201ENST00000554308 SPRR5A0A1B0GTR4 108 aa6.06□□□□□ -1.44
PPP4R3A-201ENST00000554308 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
PPP4R3A-201ENST00000554308 LCE2BO14633 110 aa5.99□□□□□ -1.45
PPP4R3A-201ENST00000554308 KRTAP10-5P60370 271 aa5.95□□□□□ -1.46
PPP4R3A-201ENST00000554308 MT1XP80297 61 aa5.95□□□□□ -1.46
PPP4R3A-201ENST00000554308 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
PPP4R3A-201ENST00000554308 FSIP2Q5CZC0 6907 aa5.89□□□□□ -1.47
PPP4R3A-201ENST00000554308 PRO2289Q9P1D8 64 aa5.81□□□□□ -1.48
PPP4R3A-201ENST00000554308 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
PPP4R3A-201ENST00000554308 KMT2DO14686 5537 aa5.76□□□□□ -1.49
PPP4R3A-201ENST00000554308 KRTAP10-12P60413 245 aa5.72□□□□□ -1.49
PPP4R3A-201ENST00000554308 KRTAP8-1Q8IUC2 63 aa5.7□□□□□ -1.5
PPP4R3A-201ENST00000554308 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
PPP4R3A-201ENST00000554308 KRTAP12-3P60328 96 aa5.6□□□□□ -1.51
PPP4R3A-201ENST00000554308 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
PPP4R3A-201ENST00000554308 KRTAP4-8Q9BYQ9 185 aa5.56□□□□□ -1.52
PPP4R3A-201ENST00000554308 KRTAP19-5Q3LI72 72 aa5.47□□□□□ -1.53
PPP4R3A-201ENST00000554308 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.53
PPP4R3A-201ENST00000554308 INE1O15225 51 aa5.42□□□□□ -1.54
PPP4R3A-201ENST00000554308 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
PPP4R3A-201ENST00000554308 KRTAP19-7Q3SYF9 63 aa5.31□□□□□ -1.56
PPP4R3A-201ENST00000554308 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
PPP4R3A-201ENST00000554308 MUC12Q9UKN1 5478 aa5.22□□□□□ -1.57
PPP4R3A-201ENST00000554308 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
PPP4R3A-201ENST00000554308 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
PPP4R3A-201ENST00000554308 MACF1Q9UPN3 7388 aaKnown RBP5.2□□□□□ -1.58
PPP4R3A-201ENST00000554308 MT1EP04732 61 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms