RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 ANAPC13Q9BS18 74 aa8.7□□□□□ -1.02
PSEN1-210ENST00000554131 LCE2DQ5TA82 110 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-210ENST00000554131 CSAG1Q6PB30 78 aa8.68□□□□□ -1.02
PSEN1-210ENST00000554131 CYSTM1Q9H1C7 97 aa8.67□□□□□ -1.02
PSEN1-210ENST00000554131 SPANXA2-OT1Q8N9U9 137 aa8.66□□□□□ -1.02
PSEN1-210ENST00000554131 KRTAP9-2Q9BYQ4 174 aa8.64□□□□□ -1.03
PSEN1-210ENST00000554131 KRTAP10-10P60014 251 aa8.62□□□□□ -1.03
PSEN1-210ENST00000554131 NDUFC1O43677 76 aa8.6□□□□□ -1.03
PSEN1-210ENST00000554131 H7BZZ5 65 aa8.59□□□□□ -1.03
PSEN1-210ENST00000554131 KRTAP9-3Q9BYQ3 159 aa8.59□□□□□ -1.03
PSEN1-210ENST00000554131 ACYP2P14621 99 aa8.58□□□□□ -1.04
PSEN1-210ENST00000554131 CCDC179H3BU77 68 aa8.57□□□□□ -1.04
PSEN1-210ENST00000554131 H0YAA0 97 aa8.48□□□□□ -1.05
PSEN1-210ENST00000554131 LCE2BO14633 110 aa8.45□□□□□ -1.06
PSEN1-210ENST00000554131 USH2AO75445 5202 aa8.38□□□□□ -1.07
PSEN1-210ENST00000554131 CHKB-CPT1BH3BT56 60 aa8.38□□□□□ -1.07
PSEN1-210ENST00000554131 COA5Q86WW8 74 aa8.38□□□□□ -1.07
PSEN1-210ENST00000554131 KRTAP19-1Q8IUB9 90 aa8.37□□□□□ -1.07
PSEN1-210ENST00000554131 ADM2Q7Z4H4 148 aa8.36□□□□□ -1.07
PSEN1-210ENST00000554131 SPTSSBQ8NFR3 76 aa8.34□□□□□ -1.07
PSEN1-210ENST00000554131 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
PSEN1-210ENST00000554131 SPRR2GQ9BYE4 73 aa8.32□□□□□ -1.08
PSEN1-210ENST00000554131 FSIP2Q5CZC0 6907 aa8.29□□□□□ -1.08
PSEN1-210ENST00000554131 P0C880 135 aa8.29□□□□□ -1.08
PSEN1-210ENST00000554131 CRIPTQ9P021 101 aa8.27□□□□□ -1.09
PSEN1-210ENST00000554131 ATP5EP56381 51 aaPredicted RBP8.25□□□□□ -1.09
PSEN1-210ENST00000554131 KRTAP9-6A0A140TA67 174 aa8.23□□□□□ -1.09
PSEN1-210ENST00000554131 TMEM258P61165 79 aa8.23□□□□□ -1.09
PSEN1-210ENST00000554131 CRCT1Q9UGL9 99 aa8.23□□□□□ -1.09
PSEN1-210ENST00000554131 SSPOA2VEC9 5147 aa8.22□□□□□ -1.09
PSEN1-210ENST00000554131 KRTAP19-8Q3LI54 63 aa8.2□□□□□ -1.1
PSEN1-210ENST00000554131 MT1BP07438 61 aa8.15□□□□□ -1.1
PSEN1-210ENST00000554131 PCP4P48539 62 aa8.09□□□□□ -1.11
PSEN1-210ENST00000554131 Q5VV11 94 aa8.08□□□□□ -1.12
PSEN1-210ENST00000554131 R4GN34 69 aa8.08□□□□□ -1.12
PSEN1-210ENST00000554131 M0QZ58 72 aa8.05□□□□□ -1.12
PSEN1-210ENST00000554131 KRTAP19-6Q3LI70 58 aa8.05□□□□□ -1.12
PSEN1-210ENST00000554131 KRTAP13-4Q3LI77 160 aa7.97□□□□□ -1.13
PSEN1-210ENST00000554131 SERP1Q9Y6X1 66 aa7.97□□□□□ -1.13
PSEN1-210ENST00000554131 SEC61GP60059 68 aa7.95□□□□□ -1.14
PSEN1-210ENST00000554131 FCGBPQ9Y6R7 5405 aaPredicted RBP7.94□□□□□ -1.14
PSEN1-210ENST00000554131 A0A1B0GU69 56 aa7.89□□□□□ -1.15
PSEN1-210ENST00000554131 LINC01558Q9Y6Z2 57 aa7.89□□□□□ -1.15
PSEN1-210ENST00000554131 LINC01554Q52M75 96 aa7.88□□□□□ -1.15
PSEN1-210ENST00000554131 A0A1B0GU33 70 aa7.85□□□□□ -1.15
PSEN1-210ENST00000554131 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
PSEN1-210ENST00000554131 A6NN06 94 aa7.8□□□□□ -1.16
PSEN1-210ENST00000554131 PLAC4Q8WY50 150 aa7.8□□□□□ -1.16
PSEN1-210ENST00000554131 SPATA8Q6RVD6 105 aa7.79□□□□□ -1.16
PSEN1-210ENST00000554131 MT1XP80297 61 aa7.75□□□□□ -1.17
PSEN1-210ENST00000554131 PRR15LQ9BU68 103 aa7.75□□□□□ -1.17
PSEN1-210ENST00000554131 RPS28P62857 69 aaKnown RBP7.71□□□□□ -1.18
PSEN1-210ENST00000554131 Q1T7F1 81 aa7.69□□□□□ -1.18
PSEN1-210ENST00000554131 SMIM26A0A096LP01 95 aa7.67□□□□□ -1.18
PSEN1-210ENST00000554131 A0A0D9SG42 100 aa7.67□□□□□ -1.18
PSEN1-210ENST00000554131 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.67□□□□□ -1.18
PSEN1-210ENST00000554131 V9GYY9 64 aa7.64□□□□□ -1.19
PSEN1-210ENST00000554131 PRO2289Q9P1D8 64 aa7.62□□□□□ -1.19
PSEN1-210ENST00000554131 A8MU10 97 aa7.61□□□□□ -1.19
PSEN1-210ENST00000554131 KRTAP12-1P59990 96 aa7.6□□□□□ -1.19
PSEN1-210ENST00000554131 PSPHP1O15172 72 aa7.57□□□□□ -1.2
PSEN1-210ENST00000554131 MACF1Q9UPN3 7388 aaKnown RBP7.57□□□□□ -1.2
PSEN1-210ENST00000554131 UQCR11O14957 56 aa7.55□□□□□ -1.2
PSEN1-210ENST00000554131 KRTAP12-2P59991 146 aa7.55□□□□□ -1.2
PSEN1-210ENST00000554131 SPINT4Q6UDR6 99 aa7.51□□□□□ -1.21
PSEN1-210ENST00000554131 CAMK2N1Q7Z7J9 78 aa7.47□□□□□ -1.21
PSEN1-210ENST00000554131 MIR22HGQ0VDD5 57 aa7.43□□□□□ -1.22
PSEN1-210ENST00000554131 KRTAP9-7A8MTY7 169 aa7.41□□□□□ -1.22
PSEN1-210ENST00000554131 KRTAP10-7P60409 375 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-210ENST00000554131 SYNE2Q8WXH0 6885 aaKnown RBP7.4□□□□□ -1.23
PSEN1-210ENST00000554131 KRTAP10-12P60413 245 aa7.36□□□□□ -1.23
PSEN1-210ENST00000554131 KMT2DO14686 5537 aa7.33□□□□□ -1.24
PSEN1-210ENST00000554131 KRTAP6-3Q3LI67 103 aa7.31□□□□□ -1.24
PSEN1-210ENST00000554131 A6NED7 52 aa7.3□□□□□ -1.24
PSEN1-210ENST00000554131 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
PSEN1-210ENST00000554131 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
PSEN1-210ENST00000554131 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
PSEN1-210ENST00000554131 KRTAP5-9P26371 169 aa7.21□□□□□ -1.26
PSEN1-210ENST00000554131 KRTAP8-1Q8IUC2 63 aa7.16□□□□□ -1.26
PSEN1-210ENST00000554131 CDC42SE1Q9NRR8 79 aa7.13□□□□□ -1.27
PSEN1-210ENST00000554131 K7ERS5 55 aa7.11□□□□□ -1.27
PSEN1-210ENST00000554131 MUC12Q9UKN1 5478 aa7.07□□□□□ -1.28
PSEN1-210ENST00000554131 TNP1P09430 55 aa7.04□□□□□ -1.28
PSEN1-210ENST00000554131 SPRR2FQ96RM1 72 aa7.04□□□□□ -1.28
PSEN1-210ENST00000554131 MDN1Q9NU22 5596 aa6.95□□□□□ -1.3
PSEN1-210ENST00000554131 KRTAP19-7Q3SYF9 63 aa6.94□□□□□ -1.3
PSEN1-210ENST00000554131 LCE3AQ5TA76 89 aa6.92□□□□□ -1.3
PSEN1-210ENST00000554131 NEBP20929 6669 aa6.91□□□□□ -1.3
PSEN1-210ENST00000554131 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
PSEN1-210ENST00000554131 LCE1AQ5T7P2 110 aa6.86□□□□□ -1.31
PSEN1-210ENST00000554131 KRTAP19-5Q3LI72 72 aa6.84□□□□□ -1.31
PSEN1-210ENST00000554131 MT1EP04732 61 aa6.83□□□□□ -1.32
PSEN1-210ENST00000554131 SPRR2EP22531 72 aa6.82□□□□□ -1.32
PSEN1-210ENST00000554131 SPRR2BP35325 72 aa6.82□□□□□ -1.32
PSEN1-210ENST00000554131 SPRR2AP35326 72 aa6.82□□□□□ -1.32
PSEN1-210ENST00000554131 ROMO1P60602 79 aa6.81□□□□□ -1.32
PSEN1-210ENST00000554131 BRK1Q8WUW1 75 aa6.8□□□□□ -1.32
PSEN1-210ENST00000554131 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
PSEN1-210ENST00000554131 KRTAP19-3Q7Z4W3 81 aa6.65□□□□□ -1.34
PSEN1-210ENST00000554131 LCE5AQ5TCM9 118 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms