RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 IMUPQ9GZP8 106 aa4.51□□□□□ -1.69
CHD8-206ENST00000553870 H0Y9P7 68 aa4.49□□□□□ -1.69
CHD8-206ENST00000553870 MT2AP02795 61 aa4.49□□□□□ -1.69
CHD8-206ENST00000553870 KRTAP3-1Q9BYR8 98 aa4.49□□□□□ -1.69
CHD8-206ENST00000553870 OCR1Q9BZK8 76 aa4.49□□□□□ -1.69
CHD8-206ENST00000553870 C5orf47Q569G3 176 aa4.48□□□□□ -1.69
CHD8-206ENST00000553870 SCGB1A1P11684 91 aa4.47□□□□□ -1.69
CHD8-206ENST00000553870 MP68P56378 58 aa4.47□□□□□ -1.69
CHD8-206ENST00000553870 KRTAP10-10P60014 251 aa4.46□□□□□ -1.7
CHD8-206ENST00000553870 H3BPC8 53 aa4.45□□□□□ -1.7
CHD8-206ENST00000553870 MT1FP04733 61 aa4.45□□□□□ -1.7
CHD8-206ENST00000553870 LINC00208Q96KT6 92 aa4.44□□□□□ -1.7
CHD8-206ENST00000553870 S4R3F8 94 aa4.44□□□□□ -1.7
CHD8-206ENST00000553870 CSAG1Q6PB30 78 aa4.43□□□□□ -1.7
CHD8-206ENST00000553870 MT-ATP8P03928 68 aa4.42□□□□□ -1.7
CHD8-206ENST00000553870 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
CHD8-206ENST00000553870 A8MUN3 132 aa4.41□□□□□ -1.7
CHD8-206ENST00000553870 SMIM20Q8N5G0 67 aa4.41□□□□□ -1.7
CHD8-206ENST00000553870 LCA10Q71F78 164 aa4.4□□□□□ -1.71
CHD8-206ENST00000553870 FSIP2Q5CZC0 6907 aa4.37□□□□□ -1.71
CHD8-206ENST00000553870 KLKP1Q107X0 134 aa4.37□□□□□ -1.71
CHD8-206ENST00000553870 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
CHD8-206ENST00000553870 TRAV7A0A075B6U4 112 aa4.36□□□□□ -1.71
CHD8-206ENST00000553870 FAM236AA0A1B0GUQ0 79 aa4.35□□□□□ -1.71
CHD8-206ENST00000553870 FAM236BA0A1B0GV22 79 aa4.35□□□□□ -1.71
CHD8-206ENST00000553870 NDUFC1O43677 76 aa4.34□□□□□ -1.71
CHD8-206ENST00000553870 DMAC1Q96GE9 116 aa4.29□□□□□ -1.72
CHD8-206ENST00000553870 H0YAA0 97 aa4.28□□□□□ -1.72
CHD8-206ENST00000553870 CRIPTQ9P021 101 aa4.27□□□□□ -1.73
CHD8-206ENST00000553870 USH2AO75445 5202 aa4.27□□□□□ -1.73
CHD8-206ENST00000553870 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
CHD8-206ENST00000553870 ACYP2P14621 99 aa4.25□□□□□ -1.73
CHD8-206ENST00000553870 SPRR2GQ9BYE4 73 aa4.23□□□□□ -1.73
CHD8-206ENST00000553870 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
CHD8-206ENST00000553870 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
CHD8-206ENST00000553870 SPANXA2-OT1Q8N9U9 137 aa4.21□□□□□ -1.74
CHD8-206ENST00000553870 SNURFQ9Y675 71 aa4.21□□□□□ -1.74
CHD8-206ENST00000553870 C20orf197Q8N268 126 aa4.2□□□□□ -1.74
CHD8-206ENST00000553870 KRTAP19-8Q3LI54 63 aa4.19□□□□□ -1.74
CHD8-206ENST00000553870 ADM2Q7Z4H4 148 aa4.18□□□□□ -1.74
CHD8-206ENST00000553870 SPTSSBQ8NFR3 76 aa4.18□□□□□ -1.74
CHD8-206ENST00000553870 Q5VV11 94 aa4.17□□□□□ -1.74
CHD8-206ENST00000553870 COX7CP15954 63 aa4.16□□□□□ -1.74
CHD8-206ENST00000553870 CHKB-CPT1BH3BT56 60 aa4.14□□□□□ -1.75
CHD8-206ENST00000553870 MT1BP07438 61 aa4.13□□□□□ -1.75
CHD8-206ENST00000553870 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
CHD8-206ENST00000553870 P0C880 135 aa4.09□□□□□ -1.75
CHD8-206ENST00000553870 R4GN34 69 aa4.09□□□□□ -1.75
CHD8-206ENST00000553870 ANAPC13Q9BS18 74 aa4.07□□□□□ -1.76
CHD8-206ENST00000553870 A6NN06 94 aa4.05□□□□□ -1.76
CHD8-206ENST00000553870 H7BZZ5 65 aa4.05□□□□□ -1.76
CHD8-206ENST00000553870 M0QZ58 72 aa4.04□□□□□ -1.76
CHD8-206ENST00000553870 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
CHD8-206ENST00000553870 COA5Q86WW8 74 aa4.03□□□□□ -1.76
CHD8-206ENST00000553870 PLAC4Q8WY50 150 aa4.02□□□□□ -1.77
CHD8-206ENST00000553870 CYSTM1Q9H1C7 97 aa4□□□□□ -1.77
CHD8-206ENST00000553870 SEC61GP60059 68 aa3.97□□□□□ -1.77
CHD8-206ENST00000553870 PRO2289Q9P1D8 64 aa3.97□□□□□ -1.77
CHD8-206ENST00000553870 CCDC179H3BU77 68 aa3.96□□□□□ -1.78
CHD8-206ENST00000553870 LINC01554Q52M75 96 aa3.95□□□□□ -1.78
CHD8-206ENST00000553870 SERP1Q9Y6X1 66 aa3.95□□□□□ -1.78
CHD8-206ENST00000553870 MACF1Q9UPN3 7388 aaKnown RBP3.94□□□□□ -1.78
CHD8-206ENST00000553870 ATP5EP56381 51 aaPredicted RBP3.94□□□□□ -1.78
CHD8-206ENST00000553870 KRTAP6-3Q3LI67 103 aa3.92□□□□□ -1.78
CHD8-206ENST00000553870 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
CHD8-206ENST00000553870 MT1XP80297 61 aa3.91□□□□□ -1.78
CHD8-206ENST00000553870 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
CHD8-206ENST00000553870 A0A1B0GU33 70 aa3.86□□□□□ -1.79
CHD8-206ENST00000553870 TMEM258P61165 79 aa3.86□□□□□ -1.79
CHD8-206ENST00000553870 KRTAP13-4Q3LI77 160 aa3.86□□□□□ -1.79
CHD8-206ENST00000553870 A0A1B0GU69 56 aa3.84□□□□□ -1.79
CHD8-206ENST00000553870 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
CHD8-206ENST00000553870 PRR15LQ9BU68 103 aa3.8□□□□□ -1.8
CHD8-206ENST00000553870 KRTAP5-9P26371 169 aa3.78□□□□□ -1.8
CHD8-206ENST00000553870 SPATA8Q6RVD6 105 aa3.78□□□□□ -1.8
CHD8-206ENST00000553870 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
CHD8-206ENST00000553870 SMIM26A0A096LP01 95 aa3.77□□□□□ -1.81
CHD8-206ENST00000553870 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
CHD8-206ENST00000553870 A0A0D9SG42 100 aa3.76□□□□□ -1.81
CHD8-206ENST00000553870 KRTAP10-12P60413 245 aa3.74□□□□□ -1.81
CHD8-206ENST00000553870 SPINT4Q6UDR6 99 aa3.72□□□□□ -1.81
CHD8-206ENST00000553870 KRTAP8-1Q8IUC2 63 aa3.72□□□□□ -1.81
CHD8-206ENST00000553870 KRTAP12-1P59990 96 aa3.71□□□□□ -1.82
CHD8-206ENST00000553870 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
CHD8-206ENST00000553870 V9GYY9 64 aa3.68□□□□□ -1.82
CHD8-206ENST00000553870 UQCR11O14957 56 aa3.67□□□□□ -1.82
CHD8-206ENST00000553870 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
CHD8-206ENST00000553870 A8MU10 97 aa3.66□□□□□ -1.82
CHD8-206ENST00000553870 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
CHD8-206ENST00000553870 KMT2DO14686 5537 aa3.66□□□□□ -1.82
CHD8-206ENST00000553870 NEBP20929 6669 aa3.66□□□□□ -1.82
CHD8-206ENST00000553870 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
CHD8-206ENST00000553870 Q1T7F1 81 aa3.62□□□□□ -1.83
CHD8-206ENST00000553870 PCP4P48539 62 aa3.6□□□□□ -1.83
CHD8-206ENST00000553870 SPRR2EP22531 72 aa3.59□□□□□ -1.83
CHD8-206ENST00000553870 SPRR2BP35325 72 aa3.59□□□□□ -1.83
CHD8-206ENST00000553870 SPRR2AP35326 72 aa3.59□□□□□ -1.83
CHD8-206ENST00000553870 RPS28P62857 69 aaKnown RBP3.59□□□□□ -1.83
CHD8-206ENST00000553870 MIR22HGQ0VDD5 57 aa3.58□□□□□ -1.84
CHD8-206ENST00000553870 LCE1AQ5T7P2 110 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms