RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 TMEM258P61165 79 aa6.87□□□□□ -1.31
PRKCH-206ENST00000553830 CHKB-CPT1BH3BT56 60 aa6.86□□□□□ -1.31
PRKCH-206ENST00000553830 ATP5EP56381 51 aaPredicted RBP6.83□□□□□ -1.32
PRKCH-206ENST00000553830 COA5Q86WW8 74 aa6.83□□□□□ -1.32
PRKCH-206ENST00000553830 FLGP20930 4061 aaPredicted RBP6.83□□□□□ -1.32
PRKCH-206ENST00000553830 KRTAP3-3Q9BYR6 98 aa6.81□□□□□ -1.32
PRKCH-206ENST00000553830 LCE2AQ5TA79 106 aaPredicted RBP6.8□□□□□ -1.32
PRKCH-206ENST00000553830 CSAG1Q6PB30 78 aa6.79□□□□□ -1.32
PRKCH-206ENST00000553830 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
PRKCH-206ENST00000553830 SPTSSBQ8NFR3 76 aa6.72□□□□□ -1.33
PRKCH-206ENST00000553830 LORP23490 312 aaPredicted RBP6.67□□□□□ -1.34
PRKCH-206ENST00000553830 SERP1Q9Y6X1 66 aa6.67□□□□□ -1.34
PRKCH-206ENST00000553830 ADM2Q7Z4H4 148 aa6.62□□□□□ -1.35
PRKCH-206ENST00000553830 MT2AP02795 61 aa6.61□□□□□ -1.35
PRKCH-206ENST00000553830 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
PRKCH-206ENST00000553830 KRTAP10-10P60014 251 aa6.58□□□□□ -1.36
PRKCH-206ENST00000553830 MT1FP04733 61 aa6.57□□□□□ -1.36
PRKCH-206ENST00000553830 H0YAA0 97 aa6.54□□□□□ -1.36
PRKCH-206ENST00000553830 P0C880 135 aa6.52□□□□□ -1.37
PRKCH-206ENST00000553830 SEC61GP60059 68 aa6.5□□□□□ -1.37
PRKCH-206ENST00000553830 KRTAP3-2Q9BYR7 98 aa6.5□□□□□ -1.37
PRKCH-206ENST00000553830 KRTAP9-2Q9BYQ4 174 aa6.48□□□□□ -1.37
PRKCH-206ENST00000553830 A0A1B0GU69 56 aa6.46□□□□□ -1.38
PRKCH-206ENST00000553830 RPS28P62857 69 aaKnown RBP6.46□□□□□ -1.38
PRKCH-206ENST00000553830 SMIM26A0A096LP01 95 aa6.44□□□□□ -1.38
PRKCH-206ENST00000553830 LINC01558Q9Y6Z2 57 aa6.44□□□□□ -1.38
PRKCH-206ENST00000553830 KRTAP9-6A0A140TA67 174 aa6.43□□□□□ -1.38
PRKCH-206ENST00000553830 PRR15LQ9BU68 103 aa6.4□□□□□ -1.38
PRKCH-206ENST00000553830 KRTAP9-3Q9BYQ3 159 aa6.39□□□□□ -1.39
PRKCH-206ENST00000553830 M0QZ58 72 aa6.38□□□□□ -1.39
PRKCH-206ENST00000553830 R4GN34 69 aa6.38□□□□□ -1.39
PRKCH-206ENST00000553830 CRIPTQ9P021 101 aa6.36□□□□□ -1.39
PRKCH-206ENST00000553830 V9GYY9 64 aa6.36□□□□□ -1.39
PRKCH-206ENST00000553830 PSPHP1O15172 72 aa6.35□□□□□ -1.39
PRKCH-206ENST00000553830 Q1T7F1 81 aa6.35□□□□□ -1.39
PRKCH-206ENST00000553830 A0A1B0GU33 70 aa6.33□□□□□ -1.4
PRKCH-206ENST00000553830 KRTAP19-1Q8IUB9 90 aa6.32□□□□□ -1.4
PRKCH-206ENST00000553830 LINC01554Q52M75 96 aa6.31□□□□□ -1.4
PRKCH-206ENST00000553830 KRTAP13-4Q3LI77 160 aa6.3□□□□□ -1.4
PRKCH-206ENST00000553830 SPATA8Q6RVD6 105 aa6.29□□□□□ -1.4
PRKCH-206ENST00000553830 SPRR2GQ9BYE4 73 aa6.29□□□□□ -1.4
PRKCH-206ENST00000553830 LCE2BO14633 110 aa6.28□□□□□ -1.4
PRKCH-206ENST00000553830 LCE2DQ5TA82 110 aaPredicted RBP6.28□□□□□ -1.4
PRKCH-206ENST00000553830 Q5VV11 94 aa6.24□□□□□ -1.41
PRKCH-206ENST00000553830 A0A0D9SG42 100 aa6.23□□□□□ -1.41
PRKCH-206ENST00000553830 UQCR11O14957 56 aa6.18□□□□□ -1.42
PRKCH-206ENST00000553830 KRTAP19-8Q3LI54 63 aa6.18□□□□□ -1.42
PRKCH-206ENST00000553830 A8MU10 97 aa6.16□□□□□ -1.42
PRKCH-206ENST00000553830 A6NED7 52 aa6.15□□□□□ -1.42
PRKCH-206ENST00000553830 MT1BP07438 61 aa6.14□□□□□ -1.43
PRKCH-206ENST00000553830 MIR22HGQ0VDD5 57 aa6.13□□□□□ -1.43
PRKCH-206ENST00000553830 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
PRKCH-206ENST00000553830 SPINT4Q6UDR6 99 aa6.09□□□□□ -1.43
PRKCH-206ENST00000553830 FSIP2Q5CZC0 6907 aa6.06□□□□□ -1.44
PRKCH-206ENST00000553830 USH2AO75445 5202 aa6.04□□□□□ -1.44
PRKCH-206ENST00000553830 A6NN06 94 aa6.03□□□□□ -1.44
PRKCH-206ENST00000553830 KRTAP12-1P59990 96 aa6.03□□□□□ -1.44
PRKCH-206ENST00000553830 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
PRKCH-206ENST00000553830 CRCT1Q9UGL9 99 aa6□□□□□ -1.45
PRKCH-206ENST00000553830 CAMK2N1Q7Z7J9 78 aa5.97□□□□□ -1.45
PRKCH-206ENST00000553830 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
PRKCH-206ENST00000553830 KRTAP19-6Q3LI70 58 aa5.92□□□□□ -1.46
PRKCH-206ENST00000553830 K7ERS5 55 aa5.9□□□□□ -1.46
PRKCH-206ENST00000553830 BRK1Q8WUW1 75 aa5.9□□□□□ -1.46
PRKCH-206ENST00000553830 MT1XP80297 61 aa5.89□□□□□ -1.47
PRKCH-206ENST00000553830 KRTAP10-5P60370 271 aa5.88□□□□□ -1.47
PRKCH-206ENST00000553830 SSPOA2VEC9 5147 aa5.87□□□□□ -1.47
PRKCH-206ENST00000553830 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
PRKCH-206ENST00000553830 C10orf95Q9H7T3 257 aa5.73□□□□□ -1.49
PRKCH-206ENST00000553830 KRTAP9-7A8MTY7 169 aa5.72□□□□□ -1.49
PRKCH-206ENST00000553830 FCGBPQ9Y6R7 5405 aaPredicted RBP5.69□□□□□ -1.5
PRKCH-206ENST00000553830 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
PRKCH-206ENST00000553830 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.64□□□□□ -1.51
PRKCH-206ENST00000553830 ROMO1P60602 79 aa5.6□□□□□ -1.51
PRKCH-206ENST00000553830 TNP1P09430 55 aa5.59□□□□□ -1.51
PRKCH-206ENST00000553830 KRTAP10-12P60413 245 aa5.56□□□□□ -1.52
PRKCH-206ENST00000553830 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
PRKCH-206ENST00000553830 PMAIP1Q13794 54 aa5.54□□□□□ -1.52
PRKCH-206ENST00000553830 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
PRKCH-206ENST00000553830 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
PRKCH-206ENST00000553830 SVIPQ8NHG7 77 aa5.51□□□□□ -1.53
PRKCH-206ENST00000553830 KRTAP4-8Q9BYQ9 185 aa5.51□□□□□ -1.53
PRKCH-206ENST00000553830 KRTAP8-1Q8IUC2 63 aa5.44□□□□□ -1.54
PRKCH-206ENST00000553830 LCE3AQ5TA76 89 aa5.43□□□□□ -1.54
PRKCH-206ENST00000553830 MACF1Q9UPN3 7388 aaKnown RBP5.42□□□□□ -1.54
PRKCH-206ENST00000553830 KMT2DO14686 5537 aa5.38□□□□□ -1.55
PRKCH-206ENST00000553830 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
PRKCH-206ENST00000553830 SYNE2Q8WXH0 6885 aaKnown RBP5.31□□□□□ -1.56
PRKCH-206ENST00000553830 KRTAP6-3Q3LI67 103 aa5.3□□□□□ -1.56
PRKCH-206ENST00000553830 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
PRKCH-206ENST00000553830 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
PRKCH-206ENST00000553830 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
PRKCH-206ENST00000553830 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
PRKCH-206ENST00000553830 PP632Q6XCG6 107 aa5.24□□□□□ -1.57
PRKCH-206ENST00000553830 KRTAP5-9P26371 169 aa5.23□□□□□ -1.57
PRKCH-206ENST00000553830 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
PRKCH-206ENST00000553830 KTN1-AS1Q86SY8 53 aa5.2□□□□□ -1.58
PRKCH-206ENST00000553830 MT1EP04732 61 aa5.18□□□□□ -1.58
PRKCH-206ENST00000553830 SPRR2EP22531 72 aa5.12□□□□□ -1.59
PRKCH-206ENST00000553830 SPRR2BP35325 72 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms