RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 TRAV7A0A075B6U4 112 aa6.77□□□□□ -1.33
SV2B-204ENST00000553727 CSAG1Q6PB30 78 aa6.75□□□□□ -1.33
SV2B-204ENST00000553727 A8MUN3 132 aa6.71□□□□□ -1.34
SV2B-204ENST00000553727 KRTAP9-3Q9BYQ3 159 aa6.69□□□□□ -1.34
SV2B-204ENST00000553727 KRTAP9-7A8MTY7 169 aa6.66□□□□□ -1.34
SV2B-204ENST00000553727 NDUFC1O43677 76 aa6.65□□□□□ -1.34
SV2B-204ENST00000553727 SERP2Q8N6R1 65 aa6.64□□□□□ -1.35
SV2B-204ENST00000553727 SNURFQ9Y675 71 aa6.64□□□□□ -1.35
SV2B-204ENST00000553727 LCE2BO14633 110 aa6.61□□□□□ -1.35
SV2B-204ENST00000553727 C20orf197Q8N268 126 aa6.61□□□□□ -1.35
SV2B-204ENST00000553727 DMAC1Q96GE9 116 aa6.61□□□□□ -1.35
SV2B-204ENST00000553727 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.58□□□□□ -1.36
SV2B-204ENST00000553727 ACYP2P14621 99 aa6.53□□□□□ -1.36
SV2B-204ENST00000553727 COX7CP15954 63 aa6.5□□□□□ -1.37
SV2B-204ENST00000553727 H0YAA0 97 aa6.47□□□□□ -1.37
SV2B-204ENST00000553727 ADM2Q7Z4H4 148 aa6.47□□□□□ -1.37
SV2B-204ENST00000553727 SPANXA2-OT1Q8N9U9 137 aa6.47□□□□□ -1.37
SV2B-204ENST00000553727 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
SV2B-204ENST00000553727 USH2AO75445 5202 aa6.45□□□□□ -1.38
SV2B-204ENST00000553727 CHKB-CPT1BH3BT56 60 aa6.44□□□□□ -1.38
SV2B-204ENST00000553727 ANAPC13Q9BS18 74 aa6.43□□□□□ -1.38
SV2B-204ENST00000553727 SPTSSBQ8NFR3 76 aa6.41□□□□□ -1.38
SV2B-204ENST00000553727 SPRR2GQ9BYE4 73 aa6.41□□□□□ -1.38
SV2B-204ENST00000553727 CRIPTQ9P021 101 aa6.41□□□□□ -1.38
SV2B-204ENST00000553727 CYSTM1Q9H1C7 97 aa6.36□□□□□ -1.39
SV2B-204ENST00000553727 H7BZZ5 65 aa6.34□□□□□ -1.39
SV2B-204ENST00000553727 P0C880 135 aa6.34□□□□□ -1.39
SV2B-204ENST00000553727 Q5VV11 94 aa6.34□□□□□ -1.39
SV2B-204ENST00000553727 KRTAP19-8Q3LI54 63 aa6.33□□□□□ -1.4
SV2B-204ENST00000553727 SSPOA2VEC9 5147 aa6.33□□□□□ -1.4
SV2B-204ENST00000553727 KRTAP19-6Q3LI70 58 aa6.31□□□□□ -1.4
SV2B-204ENST00000553727 MT1BP07438 61 aa6.3□□□□□ -1.4
SV2B-204ENST00000553727 COA5Q86WW8 74 aa6.3□□□□□ -1.4
SV2B-204ENST00000553727 CCDC179H3BU77 68 aa6.29□□□□□ -1.4
SV2B-204ENST00000553727 R4GN34 69 aa6.28□□□□□ -1.4
SV2B-204ENST00000553727 M0QZ58 72 aa6.25□□□□□ -1.41
SV2B-204ENST00000553727 FCGBPQ9Y6R7 5405 aaPredicted RBP6.25□□□□□ -1.41
SV2B-204ENST00000553727 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
SV2B-204ENST00000553727 A6NN06 94 aa6.17□□□□□ -1.42
SV2B-204ENST00000553727 LINC01554Q52M75 96 aa6.17□□□□□ -1.42
SV2B-204ENST00000553727 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
SV2B-204ENST00000553727 PLAC4Q8WY50 150 aa6.13□□□□□ -1.43
SV2B-204ENST00000553727 SEC61GP60059 68 aa6.12□□□□□ -1.43
SV2B-204ENST00000553727 KRTAP10-5P60370 271 aa6.11□□□□□ -1.43
SV2B-204ENST00000553727 ATP5EP56381 51 aaPredicted RBP6.1□□□□□ -1.43
SV2B-204ENST00000553727 SERP1Q9Y6X1 66 aa6.1□□□□□ -1.43
SV2B-204ENST00000553727 TMEM258P61165 79 aa6.05□□□□□ -1.44
SV2B-204ENST00000553727 H3BS24 57 aa6.04□□□□□ -1.44
SV2B-204ENST00000553727 KRTAP13-4Q3LI77 160 aa6.02□□□□□ -1.45
SV2B-204ENST00000553727 PRO2289Q9P1D8 64 aa6□□□□□ -1.45
SV2B-204ENST00000553727 A0A1B0GU69 56 aa5.99□□□□□ -1.45
SV2B-204ENST00000553727 A0A1B0GU33 70 aa5.98□□□□□ -1.45
SV2B-204ENST00000553727 MT1XP80297 61 aa5.97□□□□□ -1.45
SV2B-204ENST00000553727 KRTAP6-3Q3LI67 103 aa5.97□□□□□ -1.45
SV2B-204ENST00000553727 SPATA8Q6RVD6 105 aa5.93□□□□□ -1.46
SV2B-204ENST00000553727 A0A0D9SG42 100 aa5.91□□□□□ -1.46
SV2B-204ENST00000553727 PRR15LQ9BU68 103 aa5.88□□□□□ -1.47
SV2B-204ENST00000553727 LINC01558Q9Y6Z2 57 aa5.86□□□□□ -1.47
SV2B-204ENST00000553727 CAMK2N1Q7Z7J9 78 aa5.84□□□□□ -1.47
SV2B-204ENST00000553727 NEBP20929 6669 aa5.82□□□□□ -1.48
SV2B-204ENST00000553727 SPINT4Q6UDR6 99 aa5.81□□□□□ -1.48
SV2B-204ENST00000553727 SMIM26A0A096LP01 95 aa5.8□□□□□ -1.48
SV2B-204ENST00000553727 PCP4P48539 62 aa5.8□□□□□ -1.48
SV2B-204ENST00000553727 KRTAP20-1Q3LI63 56 aa5.79□□□□□ -1.48
SV2B-204ENST00000553727 A8MU10 97 aa5.77□□□□□ -1.49
SV2B-204ENST00000553727 KRTAP12-1P59990 96 aa5.75□□□□□ -1.49
SV2B-204ENST00000553727 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
SV2B-204ENST00000553727 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
SV2B-204ENST00000553727 KRTAP10-7P60409 375 aaPredicted RBP5.72□□□□□ -1.49
SV2B-204ENST00000553727 UQCR11O14957 56 aa5.68□□□□□ -1.5
SV2B-204ENST00000553727 V9GYY9 64 aa5.68□□□□□ -1.5
SV2B-204ENST00000553727 KRTAP10-12P60413 245 aa5.67□□□□□ -1.5
SV2B-204ENST00000553727 KRTAP8-1Q8IUC2 63 aa5.67□□□□□ -1.5
SV2B-204ENST00000553727 KRTAP4-8A0A0G2JLE6 195 aa5.66□□□□□ -1.5
SV2B-204ENST00000553727 KRTAP4-8Q9BYQ9 185 aa5.66□□□□□ -1.5
SV2B-204ENST00000553727 KRTAP5-9P26371 169 aa5.65□□□□□ -1.5
SV2B-204ENST00000553727 PSPHP1O15172 72 aa5.64□□□□□ -1.51
SV2B-204ENST00000553727 Q1T7F1 81 aa5.64□□□□□ -1.51
SV2B-204ENST00000553727 SPRR2FQ96RM1 72 aa5.61□□□□□ -1.51
SV2B-204ENST00000553727 KMT2DO14686 5537 aa5.6□□□□□ -1.51
SV2B-204ENST00000553727 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
SV2B-204ENST00000553727 RPS28P62857 69 aaKnown RBP5.58□□□□□ -1.52
SV2B-204ENST00000553727 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
SV2B-204ENST00000553727 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
SV2B-204ENST00000553727 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
SV2B-204ENST00000553727 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
SV2B-204ENST00000553727 A6NED7 52 aa5.47□□□□□ -1.53
SV2B-204ENST00000553727 MDN1Q9NU22 5596 aa5.46□□□□□ -1.53
SV2B-204ENST00000553727 SPRR2EP22531 72 aa5.46□□□□□ -1.54
SV2B-204ENST00000553727 SPRR2BP35325 72 aa5.46□□□□□ -1.54
SV2B-204ENST00000553727 SPRR2AP35326 72 aa5.46□□□□□ -1.54
SV2B-204ENST00000553727 K7ERS5 55 aa5.44□□□□□ -1.54
SV2B-204ENST00000553727 TNP1P09430 55 aa5.43□□□□□ -1.54
SV2B-204ENST00000553727 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
SV2B-204ENST00000553727 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
SV2B-204ENST00000553727 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
SV2B-204ENST00000553727 KRTAP19-5Q3LI72 72 aa5.29□□□□□ -1.56
SV2B-204ENST00000553727 KRTAP2-2Q9BYT5 123 aa5.29□□□□□ -1.56
SV2B-204ENST00000553727 KRTAP2-1Q9BYU5 128 aa5.29□□□□□ -1.56
SV2B-204ENST00000553727 MT1EP04732 61 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms