RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 LOC101927531A0A1B0GV80 90 aa5.01□□□□□ -1.61
TMEM260-204ENST00000553335 H3BPC8 53 aa5□□□□□ -1.61
TMEM260-204ENST00000553335 RBM12B-AS1Q9P1G2 102 aa5□□□□□ -1.61
TMEM260-204ENST00000553335 HRES1P13985 223 aa4.99□□□□□ -1.61
TMEM260-204ENST00000553335 C1orf64Q8NEQ6 169 aa4.99□□□□□ -1.61
TMEM260-204ENST00000553335 LINC00208Q96KT6 92 aa4.99□□□□□ -1.61
TMEM260-204ENST00000553335 CYP4F30PQ9H0H9 118 aa4.97□□□□□ -1.61
TMEM260-204ENST00000553335 FAM236DA0A1B0GTK5 79 aa4.96□□□□□ -1.62
TMEM260-204ENST00000553335 FAM236CP0DP71 79 aa4.96□□□□□ -1.62
TMEM260-204ENST00000553335 COX6B2Q6YFQ2 88 aa4.96□□□□□ -1.62
TMEM260-204ENST00000553335 SERP2Q8N6R1 65 aa4.96□□□□□ -1.62
TMEM260-204ENST00000553335 FAT4Q6V0I7 4981 aa4.92□□□□□ -1.62
TMEM260-204ENST00000553335 COX7CP15954 63 aa4.91□□□□□ -1.62
TMEM260-204ENST00000553335 C4orf26Q17RF5 130 aa4.91□□□□□ -1.62
TMEM260-204ENST00000553335 ANAPC13Q9BS18 74 aa4.91□□□□□ -1.62
TMEM260-204ENST00000553335 KRTAP19-2Q3LHN2 52 aa4.9□□□□□ -1.63
TMEM260-204ENST00000553335 KLKP1Q107X0 134 aa4.89□□□□□ -1.63
TMEM260-204ENST00000553335 C20orf197Q8N268 126 aa4.89□□□□□ -1.63
TMEM260-204ENST00000553335 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
TMEM260-204ENST00000553335 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
TMEM260-204ENST00000553335 H1FX-AS1Q4G0G2 97 aa4.85□□□□□ -1.63
TMEM260-204ENST00000553335 A8MUN3 132 aa4.82□□□□□ -1.64
TMEM260-204ENST00000553335 MT1HP80294 61 aa4.81□□□□□ -1.64
TMEM260-204ENST00000553335 M0R2T5 61 aa4.8□□□□□ -1.64
TMEM260-204ENST00000553335 NDUFC1O43677 76 aa4.8□□□□□ -1.64
TMEM260-204ENST00000553335 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
TMEM260-204ENST00000553335 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
TMEM260-204ENST00000553335 SPANXA2-OT1Q8N9U9 137 aa4.78□□□□□ -1.64
TMEM260-204ENST00000553335 CCDC179H3BU77 68 aa4.77□□□□□ -1.65
TMEM260-204ENST00000553335 DMAC1Q96GE9 116 aa4.77□□□□□ -1.65
TMEM260-204ENST00000553335 S4R3F8 94 aa4.77□□□□□ -1.65
TMEM260-204ENST00000553335 ACYP2P14621 99 aa4.75□□□□□ -1.65
TMEM260-204ENST00000553335 H7BZZ5 65 aa4.74□□□□□ -1.65
TMEM260-204ENST00000553335 LCA10Q71F78 164 aa4.72□□□□□ -1.65
TMEM260-204ENST00000553335 CYSTM1Q9H1C7 97 aa4.72□□□□□ -1.65
TMEM260-204ENST00000553335 LCE1AQ5T7P2 110 aa4.71□□□□□ -1.66
TMEM260-204ENST00000553335 CSAG1Q6PB30 78 aa4.7□□□□□ -1.66
TMEM260-204ENST00000553335 KRTAP10-6P60371 365 aaPredicted RBP4.68□□□□□ -1.66
TMEM260-204ENST00000553335 CHKB-CPT1BH3BT56 60 aa4.67□□□□□ -1.66
TMEM260-204ENST00000553335 ATP5EP56381 51 aaPredicted RBP4.66□□□□□ -1.66
TMEM260-204ENST00000553335 TMEM258P61165 79 aa4.64□□□□□ -1.67
TMEM260-204ENST00000553335 SPTSSBQ8NFR3 76 aa4.64□□□□□ -1.67
TMEM260-204ENST00000553335 COA5Q86WW8 74 aa4.62□□□□□ -1.67
TMEM260-204ENST00000553335 FSIP2Q5CZC0 6907 aa4.61□□□□□ -1.67
TMEM260-204ENST00000553335 CRCT1Q9UGL9 99 aa4.61□□□□□ -1.67
TMEM260-204ENST00000553335 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
TMEM260-204ENST00000553335 H0YAA0 97 aa4.56□□□□□ -1.68
TMEM260-204ENST00000553335 MT2AP02795 61 aa4.56□□□□□ -1.68
TMEM260-204ENST00000553335 KRTAP10-10P60014 251 aa4.55□□□□□ -1.68
TMEM260-204ENST00000553335 MT1FP04733 61 aa4.52□□□□□ -1.69
TMEM260-204ENST00000553335 ADM2Q7Z4H4 148 aa4.51□□□□□ -1.69
TMEM260-204ENST00000553335 SERP1Q9Y6X1 66 aa4.49□□□□□ -1.69
TMEM260-204ENST00000553335 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
TMEM260-204ENST00000553335 SEC61GP60059 68 aa4.47□□□□□ -1.69
TMEM260-204ENST00000553335 CRIPTQ9P021 101 aa4.47□□□□□ -1.69
TMEM260-204ENST00000553335 MT3P25713 68 aa4.46□□□□□ -1.7
TMEM260-204ENST00000553335 P0C880 135 aa4.43□□□□□ -1.7
TMEM260-204ENST00000553335 A0A1B0GU69 56 aa4.4□□□□□ -1.71
TMEM260-204ENST00000553335 R4GN34 69 aa4.39□□□□□ -1.71
TMEM260-204ENST00000553335 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
TMEM260-204ENST00000553335 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
TMEM260-204ENST00000553335 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
TMEM260-204ENST00000553335 LINC01558Q9Y6Z2 57 aa4.37□□□□□ -1.71
TMEM260-204ENST00000553335 M0QZ58 72 aa4.36□□□□□ -1.71
TMEM260-204ENST00000553335 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
TMEM260-204ENST00000553335 V9GYY9 64 aa4.35□□□□□ -1.71
TMEM260-204ENST00000553335 A0A1B0GU33 70 aa4.33□□□□□ -1.72
TMEM260-204ENST00000553335 Q1T7F1 81 aa4.3□□□□□ -1.72
TMEM260-204ENST00000553335 Q5VV11 94 aa4.3□□□□□ -1.72
TMEM260-204ENST00000553335 USH2AO75445 5202 aa4.3□□□□□ -1.72
TMEM260-204ENST00000553335 KRTAP19-8Q3LI54 63 aa4.29□□□□□ -1.72
TMEM260-204ENST00000553335 LINC01554Q52M75 96 aa4.28□□□□□ -1.72
TMEM260-204ENST00000553335 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
TMEM260-204ENST00000553335 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
TMEM260-204ENST00000553335 KRTAP13-4Q3LI77 160 aa4.25□□□□□ -1.73
TMEM260-204ENST00000553335 MT1BP07438 61 aa4.24□□□□□ -1.73
TMEM260-204ENST00000553335 SPATA8Q6RVD6 105 aa4.24□□□□□ -1.73
TMEM260-204ENST00000553335 PLAC4Q8WY50 150 aa4.24□□□□□ -1.73
TMEM260-204ENST00000553335 UQCR11O14957 56 aa4.23□□□□□ -1.73
TMEM260-204ENST00000553335 PSPHP1O15172 72 aa4.23□□□□□ -1.73
TMEM260-204ENST00000553335 A6NN06 94 aa4.2□□□□□ -1.74
TMEM260-204ENST00000553335 FCGBPQ9Y6R7 5405 aaPredicted RBP4.19□□□□□ -1.74
TMEM260-204ENST00000553335 A0A0D9SG42 100 aa4.19□□□□□ -1.74
TMEM260-204ENST00000553335 KRTAP19-6Q3LI70 58 aa4.16□□□□□ -1.74
TMEM260-204ENST00000553335 MIR22HGQ0VDD5 57 aa4.15□□□□□ -1.75
TMEM260-204ENST00000553335 A8MU10 97 aa4.14□□□□□ -1.75
TMEM260-204ENST00000553335 SPINT4Q6UDR6 99 aa4.14□□□□□ -1.75
TMEM260-204ENST00000553335 A6NED7 52 aa4.13□□□□□ -1.75
TMEM260-204ENST00000553335 KRTAP5-3Q6L8H2 238 aa4.12□□□□□ -1.75
TMEM260-204ENST00000553335 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
TMEM260-204ENST00000553335 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
TMEM260-204ENST00000553335 KRTAP12-1P59990 96 aa4.1□□□□□ -1.75
TMEM260-204ENST00000553335 CAMK2N1Q7Z7J9 78 aa4.1□□□□□ -1.75
TMEM260-204ENST00000553335 KRTAP10-5P60370 271 aa4.09□□□□□ -1.75
TMEM260-204ENST00000553335 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
TMEM260-204ENST00000553335 SYNE2Q8WXH0 6885 aaKnown RBP4.07□□□□□ -1.76
TMEM260-204ENST00000553335 K7ERS5 55 aa4.05□□□□□ -1.76
TMEM260-204ENST00000553335 MT1XP80297 61 aa4.04□□□□□ -1.76
TMEM260-204ENST00000553335 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
TMEM260-204ENST00000553335 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms