RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 OCR1Q9BZK8 76 aa7.06□□□□□ -1.28
SHMT2-204ENST00000553324 A8MUN3 132 aa7.04□□□□□ -1.28
SHMT2-204ENST00000553324 KRTAP3-3Q9BYR6 98 aa7.04□□□□□ -1.28
SHMT2-204ENST00000553324 SCGB1A1P11684 91 aa7.03□□□□□ -1.28
SHMT2-204ENST00000553324 KRTAP19-6Q3LI70 58 aa7.03□□□□□ -1.28
SHMT2-204ENST00000553324 KRTAP9-1A8MXZ3 250 aaPredicted RBP7□□□□□ -1.29
SHMT2-204ENST00000553324 H3BPC8 53 aa7□□□□□ -1.29
SHMT2-204ENST00000553324 NDUFC1O43677 76 aa7□□□□□ -1.29
SHMT2-204ENST00000553324 KLKP1Q107X0 134 aa6.97□□□□□ -1.29
SHMT2-204ENST00000553324 SPRR2GQ9BYE4 73 aa6.93□□□□□ -1.3
SHMT2-204ENST00000553324 CRIPTQ9P021 101 aa6.93□□□□□ -1.3
SHMT2-204ENST00000553324 H0YAA0 97 aa6.91□□□□□ -1.3
SHMT2-204ENST00000553324 KRTAP9-7A8MTY7 169 aa6.9□□□□□ -1.3
SHMT2-204ENST00000553324 Q5VV11 94 aa6.89□□□□□ -1.31
SHMT2-204ENST00000553324 MACF1Q9UPN3 7388 aaKnown RBP6.87□□□□□ -1.31
SHMT2-204ENST00000553324 SMIM20Q8N5G0 67 aa6.87□□□□□ -1.31
SHMT2-204ENST00000553324 KRTAP19-8Q3LI54 63 aa6.86□□□□□ -1.31
SHMT2-204ENST00000553324 TRAV7A0A075B6U4 112 aa6.81□□□□□ -1.32
SHMT2-204ENST00000553324 MT1BP07438 61 aa6.81□□□□□ -1.32
SHMT2-204ENST00000553324 DMAC1Q96GE9 116 aa6.81□□□□□ -1.32
SHMT2-204ENST00000553324 ADM2Q7Z4H4 148 aa6.79□□□□□ -1.32
SHMT2-204ENST00000553324 SYNE2Q8WXH0 6885 aaKnown RBP6.78□□□□□ -1.32
SHMT2-204ENST00000553324 ANAPC13Q9BS18 74 aa6.78□□□□□ -1.32
SHMT2-204ENST00000553324 A6NN06 94 aa6.77□□□□□ -1.33
SHMT2-204ENST00000553324 PCP4P48539 62 aa6.77□□□□□ -1.33
SHMT2-204ENST00000553324 SERP2Q8N6R1 65 aa6.76□□□□□ -1.33
SHMT2-204ENST00000553324 ACYP2P14621 99 aa6.73□□□□□ -1.33
SHMT2-204ENST00000553324 C20orf197Q8N268 126 aa6.73□□□□□ -1.33
SHMT2-204ENST00000553324 COX7CP15954 63 aa6.72□□□□□ -1.33
SHMT2-204ENST00000553324 KRTAP10-5P60370 271 aa6.67□□□□□ -1.34
SHMT2-204ENST00000553324 SPTSSBQ8NFR3 76 aa6.66□□□□□ -1.34
SHMT2-204ENST00000553324 R4GN34 69 aa6.65□□□□□ -1.34
SHMT2-204ENST00000553324 CCDC179H3BU77 68 aa6.62□□□□□ -1.35
SHMT2-204ENST00000553324 KRTAP6-3Q3LI67 103 aa6.62□□□□□ -1.35
SHMT2-204ENST00000553324 P0C880 135 aa6.61□□□□□ -1.35
SHMT2-204ENST00000553324 SNURFQ9Y675 71 aa6.61□□□□□ -1.35
SHMT2-204ENST00000553324 CHKB-CPT1BH3BT56 60 aa6.59□□□□□ -1.35
SHMT2-204ENST00000553324 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
SHMT2-204ENST00000553324 SPANXA2-OT1Q8N9U9 137 aa6.58□□□□□ -1.36
SHMT2-204ENST00000553324 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
SHMT2-204ENST00000553324 M0QZ58 72 aa6.56□□□□□ -1.36
SHMT2-204ENST00000553324 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
SHMT2-204ENST00000553324 CYSTM1Q9H1C7 97 aa6.51□□□□□ -1.37
SHMT2-204ENST00000553324 H7BZZ5 65 aa6.49□□□□□ -1.37
SHMT2-204ENST00000553324 LINC01554Q52M75 96 aa6.46□□□□□ -1.38
SHMT2-204ENST00000553324 TMEM258P61165 79 aa6.45□□□□□ -1.38
SHMT2-204ENST00000553324 MT1XP80297 61 aa6.42□□□□□ -1.38
SHMT2-204ENST00000553324 ATP5EP56381 51 aaPredicted RBP6.39□□□□□ -1.39
SHMT2-204ENST00000553324 MUC12Q9UKN1 5478 aa6.39□□□□□ -1.39
SHMT2-204ENST00000553324 KRTAP5-9P26371 169 aa6.35□□□□□ -1.39
SHMT2-204ENST00000553324 COA5Q86WW8 74 aa6.35□□□□□ -1.39
SHMT2-204ENST00000553324 NEBP20929 6669 aa6.34□□□□□ -1.39
SHMT2-204ENST00000553324 KRTAP12-2P59991 146 aa6.31□□□□□ -1.4
SHMT2-204ENST00000553324 SEC61GP60059 68 aa6.3□□□□□ -1.4
SHMT2-204ENST00000553324 KMT2DO14686 5537 aa6.29□□□□□ -1.4
SHMT2-204ENST00000553324 SERP1Q9Y6X1 66 aa6.27□□□□□ -1.41
SHMT2-204ENST00000553324 RPS28P62857 69 aaKnown RBP6.26□□□□□ -1.41
SHMT2-204ENST00000553324 MDN1Q9NU22 5596 aa6.25□□□□□ -1.41
SHMT2-204ENST00000553324 KRTAP8-1Q8IUC2 63 aa6.2□□□□□ -1.42
SHMT2-204ENST00000553324 KRTAP13-4Q3LI77 160 aa6.19□□□□□ -1.42
SHMT2-204ENST00000553324 SPRR2FQ96RM1 72 aa6.17□□□□□ -1.42
SHMT2-204ENST00000553324 A0A1B0GU33 70 aa6.13□□□□□ -1.43
SHMT2-204ENST00000553324 KRTAP10-12P60413 245 aa6.13□□□□□ -1.43
SHMT2-204ENST00000553324 CAMK2N1Q7Z7J9 78 aa6.13□□□□□ -1.43
SHMT2-204ENST00000553324 KRTAP10-7P60409 375 aaPredicted RBP6.12□□□□□ -1.43
SHMT2-204ENST00000553324 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
SHMT2-204ENST00000553324 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
SHMT2-204ENST00000553324 SMIM26A0A096LP01 95 aa6.07□□□□□ -1.44
SHMT2-204ENST00000553324 KRTAP20-1Q3LI63 56 aa6.07□□□□□ -1.44
SHMT2-204ENST00000553324 A0A1B0GU69 56 aa6.06□□□□□ -1.44
SHMT2-204ENST00000553324 SPRR2EP22531 72 aa6.06□□□□□ -1.44
SHMT2-204ENST00000553324 SPRR2BP35325 72 aa6.06□□□□□ -1.44
SHMT2-204ENST00000553324 SPRR2AP35326 72 aa6.06□□□□□ -1.44
SHMT2-204ENST00000553324 A0A0D9SG42 100 aa6.05□□□□□ -1.44
SHMT2-204ENST00000553324 SPATA8Q6RVD6 105 aa6.05□□□□□ -1.44
SHMT2-204ENST00000553324 SPINT4Q6UDR6 99 aa6□□□□□ -1.45
SHMT2-204ENST00000553324 LCE1AQ5T7P2 110 aa5.99□□□□□ -1.45
SHMT2-204ENST00000553324 Q1T7F1 81 aa5.98□□□□□ -1.45
SHMT2-204ENST00000553324 KRTAP2-3P0C7H8 128 aa5.97□□□□□ -1.45
SHMT2-204ENST00000553324 KRTAP2-4Q9BYR9 128 aa5.97□□□□□ -1.45
SHMT2-204ENST00000553324 V9GYY9 64 aa5.96□□□□□ -1.46
SHMT2-204ENST00000553324 PRR15LQ9BU68 103 aa5.95□□□□□ -1.46
SHMT2-204ENST00000553324 LINC01558Q9Y6Z2 57 aa5.94□□□□□ -1.46
SHMT2-204ENST00000553324 KRTAP12-1P59990 96 aa5.93□□□□□ -1.46
SHMT2-204ENST00000553324 SPRR2DP22532 72 aa5.86□□□□□ -1.47
SHMT2-204ENST00000553324 A8MU10 97 aa5.83□□□□□ -1.48
SHMT2-204ENST00000553324 KRTAP2-2Q9BYT5 123 aa5.8□□□□□ -1.48
SHMT2-204ENST00000553324 KRTAP2-1Q9BYU5 128 aa5.8□□□□□ -1.48
SHMT2-204ENST00000553324 PSPHP1O15172 72 aa5.76□□□□□ -1.49
SHMT2-204ENST00000553324 UQCR11O14957 56 aa5.74□□□□□ -1.49
SHMT2-204ENST00000553324 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
SHMT2-204ENST00000553324 LCE3BQ5TA77 95 aa5.7□□□□□ -1.5
SHMT2-204ENST00000553324 MT1EP04732 61 aa5.69□□□□□ -1.5
SHMT2-204ENST00000553324 TNP1P09430 55 aa5.69□□□□□ -1.5
SHMT2-204ENST00000553324 KRTAP19-3Q7Z4W3 81 aa5.65□□□□□ -1.5
SHMT2-204ENST00000553324 C10orf95Q9H7T3 257 aa5.65□□□□□ -1.5
SHMT2-204ENST00000553324 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
SHMT2-204ENST00000553324 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
SHMT2-204ENST00000553324 A6NED7 52 aa5.61□□□□□ -1.51
SHMT2-204ENST00000553324 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms