RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154		S4R3F8	94 aa		4.72	□□□□□ -1.65
CALCOCO1-222	ENST00000553154	KLKP1	Q107X0	134 aa		4.71	□□□□□ -1.66
CALCOCO1-222	ENST00000553154	C5orf47	Q569G3	176 aa		4.7	□□□□□ -1.66
CALCOCO1-222	ENST00000553154	KRTAP19-1	Q8IUB9	90 aa		4.7	□□□□□ -1.66
CALCOCO1-222	ENST00000553154	LINC00208	Q96KT6	92 aa		4.7	□□□□□ -1.66
CALCOCO1-222	ENST00000553154		H3BPC8	53 aa		4.67	□□□□□ -1.66
CALCOCO1-222	ENST00000553154	MP68	P56378	58 aa		4.67	□□□□□ -1.66
CALCOCO1-222	ENST00000553154	CSAG1	Q6PB30	78 aa		4.65	□□□□□ -1.67
CALCOCO1-222	ENST00000553154		A8MUN3	132 aa		4.64	□□□□□ -1.67
CALCOCO1-222	ENST00000553154	FAM236A	A0A1B0GUQ0	79 aa		4.63	□□□□□ -1.67
CALCOCO1-222	ENST00000553154	FAM236B	A0A1B0GV22	79 aa		4.63	□□□□□ -1.67
CALCOCO1-222	ENST00000553154	SCGB1A1	P11684	91 aa		4.63	□□□□□ -1.67
CALCOCO1-222	ENST00000553154	KRTAP6-3	Q3LI67	103 aa		4.62	□□□□□ -1.67
CALCOCO1-222	ENST00000553154	TRAV7	A0A075B6U4	112 aa		4.61	□□□□□ -1.67
CALCOCO1-222	ENST00000553154	DMAC1	Q96GE9	116 aa		4.6	□□□□□ -1.67
CALCOCO1-222	ENST00000553154	KRTAP19-6	Q3LI70	58 aa		4.59	□□□□□ -1.67
CALCOCO1-222	ENST00000553154	SMIM20	Q8N5G0	67 aa		4.59	□□□□□ -1.67
CALCOCO1-222	ENST00000553154	SPRR2G	Q9BYE4	73 aa		4.59	□□□□□ -1.67
CALCOCO1-222	ENST00000553154		H0YAA0	97 aa		4.58	□□□□□ -1.68
CALCOCO1-222	ENST00000553154	KRTAP19-8	Q3LI54	63 aa		4.56	□□□□□ -1.68
CALCOCO1-222	ENST00000553154	KRTAP20-1	Q3LI63	56 aa		4.56	□□□□□ -1.68
CALCOCO1-222	ENST00000553154	MUC12	Q9UKN1	5478 aa		4.56	□□□□□ -1.68
CALCOCO1-222	ENST00000553154	NDUFC1	O43677	76 aa		4.55	□□□□□ -1.68
CALCOCO1-222	ENST00000553154	MT1B	P07438	61 aa		4.55	□□□□□ -1.68
CALCOCO1-222	ENST00000553154	SERP2	Q8N6R1	65 aa		4.5	□□□□□ -1.69
CALCOCO1-222	ENST00000553154	CRIPT	Q9P021	101 aa		4.5	□□□□□ -1.69
CALCOCO1-222	ENST00000553154	SNURF	Q9Y675	71 aa		4.47	□□□□□ -1.69
CALCOCO1-222	ENST00000553154	ADM2	Q7Z4H4	148 aa		4.45	□□□□□ -1.7
CALCOCO1-222	ENST00000553154	C20orf197	Q8N268	126 aa		4.45	□□□□□ -1.7
CALCOCO1-222	ENST00000553154	SPANXA2-OT1	Q8N9U9	137 aa		4.45	□□□□□ -1.7
CALCOCO1-222	ENST00000553154	ANAPC13	Q9BS18	74 aa		4.45	□□□□□ -1.7
CALCOCO1-222	ENST00000553154		Q5VV11	94 aa		4.44	□□□□□ -1.7
CALCOCO1-222	ENST00000553154		P0C880	135 aa		4.43	□□□□□ -1.7
CALCOCO1-222	ENST00000553154	COX7C	P15954	63 aa		4.43	□□□□□ -1.7
CALCOCO1-222	ENST00000553154	ACYP2	P14621	99 aa		4.42	□□□□□ -1.7
CALCOCO1-222	ENST00000553154	KMT2D	O14686	5537 aa		4.41	□□□□□ -1.7
CALCOCO1-222	ENST00000553154	MDN1	Q9NU22	5596 aa		4.39	□□□□□ -1.71
CALCOCO1-222	ENST00000553154	CYSTM1	Q9H1C7	97 aa		4.39	□□□□□ -1.71
CALCOCO1-222	ENST00000553154	KRTAP10-5	P60370	271 aa		4.38	□□□□□ -1.71
CALCOCO1-222	ENST00000553154		H7BZZ5	65 aa		4.34	□□□□□ -1.71
CALCOCO1-222	ENST00000553154	GPR98	Q8WXG9	6306 aa		4.32	□□□□□ -1.72
CALCOCO1-222	ENST00000553154		A6NN06	94 aa		4.32	□□□□□ -1.72
CALCOCO1-222	ENST00000553154	CCDC179	H3BU77	68 aa		4.31	□□□□□ -1.72
CALCOCO1-222	ENST00000553154	SPTSSB	Q8NFR3	76 aa		4.31	□□□□□ -1.72
CALCOCO1-222	ENST00000553154	CHKB-CPT1B	H3BT56	60 aa		4.3	□□□□□ -1.72
CALCOCO1-222	ENST00000553154		R4GN34	69 aa		4.3	□□□□□ -1.72
CALCOCO1-222	ENST00000553154		M0QZ58	72 aa		4.29	□□□□□ -1.72
CALCOCO1-222	ENST00000553154	MT1X	P80297	61 aa		4.29	□□□□□ -1.72
CALCOCO1-222	ENST00000553154	COA5	Q86WW8	74 aa		4.29	□□□□□ -1.72
CALCOCO1-222	ENST00000553154	KRTAP2-3	P0C7H8	128 aa		4.28	□□□□□ -1.72
CALCOCO1-222	ENST00000553154	KRTAP2-4	Q9BYR9	128 aa		4.28	□□□□□ -1.72
CALCOCO1-222	ENST00000553154	ATP5E	P56381	51 aa	Predicted RBP	4.22	□□□□□ -1.73
CALCOCO1-222	ENST00000553154	KRTAP13-4	Q3LI77	160 aa		4.22	□□□□□ -1.73
CALCOCO1-222	ENST00000553154	PCP4	P48539	62 aa		4.2	□□□□□ -1.74
CALCOCO1-222	ENST00000553154	TMEM258	P61165	79 aa		4.2	□□□□□ -1.74
CALCOCO1-222	ENST00000553154	PLAC4	Q8WY50	150 aa		4.19	□□□□□ -1.74
CALCOCO1-222	ENST00000553154	KRTAP5-9	P26371	169 aa		4.17	□□□□□ -1.74
CALCOCO1-222	ENST00000553154	LINC01554	Q52M75	96 aa		4.17	□□□□□ -1.74
CALCOCO1-222	ENST00000553154	PRO2289	Q9P1D8	64 aa		4.17	□□□□□ -1.74
CALCOCO1-222	ENST00000553154	KRTAP12-2	P59991	146 aa		4.15	□□□□□ -1.75
CALCOCO1-222	ENST00000553154	KRTAP2-2	Q9BYT5	123 aa		4.1	□□□□□ -1.75
CALCOCO1-222	ENST00000553154	KRTAP2-1	Q9BYU5	128 aa		4.1	□□□□□ -1.75
CALCOCO1-222	ENST00000553154	KRTAP10-7	P60409	375 aa	Predicted RBP	4.07	□□□□□ -1.76
CALCOCO1-222	ENST00000553154	KRTAP10-12	P60413	245 aa		4.07	□□□□□ -1.76
CALCOCO1-222	ENST00000553154	SERP1	Q9Y6X1	66 aa		4.06	□□□□□ -1.76
CALCOCO1-222	ENST00000553154		A0A1B0GU33	70 aa		4.05	□□□□□ -1.76
CALCOCO1-222	ENST00000553154	SEC61G	P60059	68 aa		4.05	□□□□□ -1.76
CALCOCO1-222	ENST00000553154	SPATA8	Q6RVD6	105 aa		4.05	□□□□□ -1.76
CALCOCO1-222	ENST00000553154	KRTAP4-8	A0A0G2JLE6	195 aa		4.03	□□□□□ -1.76
CALCOCO1-222	ENST00000553154	KRTAP4-8	Q9BYQ9	185 aa		4.03	□□□□□ -1.76
CALCOCO1-222	ENST00000553154		A0A1B0GU69	56 aa		4.02	□□□□□ -1.77
CALCOCO1-222	ENST00000553154	KRTAP12-1	P59990	96 aa		4.01	□□□□□ -1.77
CALCOCO1-222	ENST00000553154	SPRR2E	P22531	72 aa		4	□□□□□ -1.77
CALCOCO1-222	ENST00000553154	SPRR2B	P35325	72 aa		4	□□□□□ -1.77
CALCOCO1-222	ENST00000553154	SPRR2A	P35326	72 aa		4	□□□□□ -1.77
CALCOCO1-222	ENST00000553154	KRTAP8-1	Q8IUC2	63 aa		3.99	□□□□□ -1.77
CALCOCO1-222	ENST00000553154	LINC01558	Q9Y6Z2	57 aa		3.99	□□□□□ -1.77
CALCOCO1-222	ENST00000553154		A0A0D9SG42	100 aa		3.98	□□□□□ -1.77
CALCOCO1-222	ENST00000553154	PRR15L	Q9BU68	103 aa		3.97	□□□□□ -1.77
CALCOCO1-222	ENST00000553154	CAMK2N1	Q7Z7J9	78 aa		3.95	□□□□□ -1.78
CALCOCO1-222	ENST00000553154	SPRR2F	Q96RM1	72 aa		3.95	□□□□□ -1.78
CALCOCO1-222	ENST00000553154		A8MU10	97 aa		3.94	□□□□□ -1.78
CALCOCO1-222	ENST00000553154		V9GYY9	64 aa		3.94	□□□□□ -1.78
CALCOCO1-222	ENST00000553154	RPS28	P62857	69 aa	Known RBP	3.93	□□□□□ -1.78
CALCOCO1-222	ENST00000553154	SMIM26	A0A096LP01	95 aa		3.92	□□□□□ -1.78
CALCOCO1-222	ENST00000553154	LCE1A	Q5T7P2	110 aa		3.91	□□□□□ -1.78
CALCOCO1-222	ENST00000553154	SPINT4	Q6UDR6	99 aa		3.9	□□□□□ -1.79
CALCOCO1-222	ENST00000553154		Q1T7F1	81 aa		3.88	□□□□□ -1.79
CALCOCO1-222	ENST00000553154	SPRR2D	P22532	72 aa		3.87	□□□□□ -1.79
CALCOCO1-222	ENST00000553154	DST	Q03001	7570 aa	Known RBP	3.87	□□□□□ -1.79
CALCOCO1-222	ENST00000553154	KRTAP19-7	Q3SYF9	63 aa		3.85	□□□□□ -1.79
CALCOCO1-222	ENST00000553154	PSPHP1	O15172	72 aa		3.83	□□□□□ -1.8
CALCOCO1-222	ENST00000553154	C10orf95	Q9H7T3	257 aa		3.83	□□□□□ -1.8
CALCOCO1-222	ENST00000553154	UQCR11	O14957	56 aa		3.82	□□□□□ -1.8
CALCOCO1-222	ENST00000553154	LCE3B	Q5TA77	95 aa		3.8	□□□□□ -1.8
CALCOCO1-222	ENST00000553154	MT1E	P04732	61 aa		3.78	□□□□□ -1.8
CALCOCO1-222	ENST00000553154		A6NED7	52 aa		3.75	□□□□□ -1.81
CALCOCO1-222	ENST00000553154	MIR22HG	Q0VDD5	57 aa		3.75	□□□□□ -1.81
CALCOCO1-222	ENST00000553154	KRTAP19-5	Q3LI72	72 aa		3.73	□□□□□ -1.81
CALCOCO1-222	ENST00000553154	KRTAP4-9	Q9BYQ8	210 aa		3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 623 ms