RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 LPAP08519 4548 aa5.8□□□□□ -1.48
MMP19-209ENST00000552872 P0C880 135 aa5.8□□□□□ -1.48
MMP19-209ENST00000552872 KRTAP25-1Q3LHN0 102 aa5.8□□□□□ -1.48
MMP19-209ENST00000552872 J3QL48 77 aa5.78□□□□□ -1.48
MMP19-209ENST00000552872 SSBP3-AS1Q7Z2R9 100 aa5.78□□□□□ -1.48
MMP19-209ENST00000552872 UQCR11O14957 56 aa5.77□□□□□ -1.49
MMP19-209ENST00000552872 KRTAP13-3Q3SY46 172 aa5.77□□□□□ -1.49
MMP19-209ENST00000552872 DMAC1Q96GE9 116 aa5.77□□□□□ -1.49
MMP19-209ENST00000552872 Q5W150 140 aa5.75□□□□□ -1.49
MMP19-209ENST00000552872 KRTAP16-1A8MUX0 517 aa5.73□□□□□ -1.49
MMP19-209ENST00000552872 LRP2P98164 4655 aa5.71□□□□□ -1.5
MMP19-209ENST00000552872 SPINK1P00995 79 aa5.7□□□□□ -1.5
MMP19-209ENST00000552872 HMCN2Q8NDA2 5059 aa5.68□□□□□ -1.5
MMP19-209ENST00000552872 A8MUU9 505 aa5.65□□□□□ -1.5
MMP19-209ENST00000552872 C9orf92A6NGG3 77 aa5.64□□□□□ -1.51
MMP19-209ENST00000552872 C20orf166-AS1Q96NR2 134 aa5.62□□□□□ -1.51
MMP19-209ENST00000552872 UBR4Q5T4S7 5183 aa5.62□□□□□ -1.51
MMP19-209ENST00000552872 IGKV2-30P06310 120 aa5.62□□□□□ -1.51
MMP19-209ENST00000552872 MUC2Q02817 5179 aa5.6□□□□□ -1.51
MMP19-209ENST00000552872 RPS29P62273 56 aaKnown RBP5.58□□□□□ -1.52
MMP19-209ENST00000552872 RNF213Q63HN8 5207 aa5.57□□□□□ -1.52
MMP19-209ENST00000552872 NDUFAF8A1L188 74 aa5.56□□□□□ -1.52
MMP19-209ENST00000552872 IGKV2D-30A0A075B6S6 120 aa5.51□□□□□ -1.53
MMP19-209ENST00000552872 SEC61BP60468 96 aaKnown RBP5.51□□□□□ -1.53
MMP19-209ENST00000552872 H0YAA0 97 aa5.5□□□□□ -1.53
MMP19-209ENST00000552872 KRTAP9-6A0A140TA67 174 aa5.49□□□□□ -1.53
MMP19-209ENST00000552872 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
MMP19-209ENST00000552872 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
MMP19-209ENST00000552872 XP32Q5T750 250 aa5.46□□□□□ -1.54
MMP19-209ENST00000552872 K7ERS5 55 aa5.45□□□□□ -1.54
MMP19-209ENST00000552872 SPINT4Q6UDR6 99 aa5.44□□□□□ -1.54
MMP19-209ENST00000552872 TPRXLQ17RH7 258 aa5.43□□□□□ -1.54
MMP19-209ENST00000552872 CRIPTQ9P021 101 aa5.43□□□□□ -1.54
MMP19-209ENST00000552872 A0A1B0GU33 70 aa5.38□□□□□ -1.55
MMP19-209ENST00000552872 MUC17Q685J3 4493 aa5.36□□□□□ -1.55
MMP19-209ENST00000552872 H1FX-AS1Q4G0G2 97 aa5.35□□□□□ -1.55
MMP19-209ENST00000552872 RPL37P61927 97 aaKnown RBP5.35□□□□□ -1.55
MMP19-209ENST00000552872 FAT4Q6V0I7 4981 aa5.33□□□□□ -1.56
MMP19-209ENST00000552872 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
MMP19-209ENST00000552872 KRTAP9-2Q9BYQ4 174 aa5.26□□□□□ -1.57
MMP19-209ENST00000552872 COX6B2Q6YFQ2 88 aa5.22□□□□□ -1.57
MMP19-209ENST00000552872 KRTAP3-1Q9BYR8 98 aa5.21□□□□□ -1.57
MMP19-209ENST00000552872 C10orf95Q9H7T3 257 aa5.15□□□□□ -1.58
MMP19-209ENST00000552872 A0A0D9SG42 100 aa5.09□□□□□ -1.59
MMP19-209ENST00000552872 FLGP20930 4061 aaPredicted RBP5.09□□□□□ -1.59
MMP19-209ENST00000552872 KRTAP13-4Q3LI77 160 aa5.07□□□□□ -1.6
MMP19-209ENST00000552872 KRTAP19-2Q3LHN2 52 aa5.06□□□□□ -1.6
MMP19-209ENST00000552872 KRTAP10-6P60371 365 aaPredicted RBP5.05□□□□□ -1.6
MMP19-209ENST00000552872 CAMK2N1Q7Z7J9 78 aa5.05□□□□□ -1.6
MMP19-209ENST00000552872 LCE2CQ5TA81 110 aa5.02□□□□□ -1.61
MMP19-209ENST00000552872 S4R3F8 94 aa4.99□□□□□ -1.61
MMP19-209ENST00000552872 KRTAP3-2Q9BYR7 98 aa4.98□□□□□ -1.61
MMP19-209ENST00000552872 KRTAP3-3Q9BYR6 98 aa4.98□□□□□ -1.61
MMP19-209ENST00000552872 KRTAP12-2P59991 146 aa4.95□□□□□ -1.62
MMP19-209ENST00000552872 MT1HP80294 61 aa4.94□□□□□ -1.62
MMP19-209ENST00000552872 M0R2T5 61 aa4.92□□□□□ -1.62
MMP19-209ENST00000552872 KRTAP12-1P59990 96 aa4.87□□□□□ -1.63
MMP19-209ENST00000552872 PLAC4Q8WY50 150 aa4.85□□□□□ -1.63
MMP19-209ENST00000552872 CRCT1Q9UGL9 99 aa4.84□□□□□ -1.63
MMP19-209ENST00000552872 LCE2AQ5TA79 106 aaPredicted RBP4.83□□□□□ -1.64
MMP19-209ENST00000552872 KRTAP9-7A8MTY7 169 aa4.8□□□□□ -1.64
MMP19-209ENST00000552872 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
MMP19-209ENST00000552872 FSIP2Q5CZC0 6907 aa4.79□□□□□ -1.64
MMP19-209ENST00000552872 M0QZ58 72 aa4.77□□□□□ -1.65
MMP19-209ENST00000552872 LORP23490 312 aaPredicted RBP4.73□□□□□ -1.65
MMP19-209ENST00000552872 KRTAP9-8Q9BYQ0 159 aa4.72□□□□□ -1.65
MMP19-209ENST00000552872 USH2AO75445 5202 aa4.71□□□□□ -1.66
MMP19-209ENST00000552872 MT2AP02795 61 aa4.7□□□□□ -1.66
MMP19-209ENST00000552872 MT1FP04733 61 aa4.7□□□□□ -1.66
MMP19-209ENST00000552872 LCE2DQ5TA82 110 aaPredicted RBP4.7□□□□□ -1.66
MMP19-209ENST00000552872 KRTAP10-10P60014 251 aa4.68□□□□□ -1.66
MMP19-209ENST00000552872 R4GN34 69 aa4.57□□□□□ -1.68
MMP19-209ENST00000552872 INE1O15225 51 aa4.55□□□□□ -1.68
MMP19-209ENST00000552872 KRTAP9-3Q9BYQ3 159 aa4.54□□□□□ -1.68
MMP19-209ENST00000552872 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.54□□□□□ -1.68
MMP19-209ENST00000552872 PP632Q6XCG6 107 aa4.53□□□□□ -1.68
MMP19-209ENST00000552872 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
MMP19-209ENST00000552872 SSPOA2VEC9 5147 aa4.5□□□□□ -1.69
MMP19-209ENST00000552872 LCE2BO14633 110 aa4.5□□□□□ -1.69
MMP19-209ENST00000552872 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
MMP19-209ENST00000552872 SPRR2GQ9BYE4 73 aa4.44□□□□□ -1.7
MMP19-209ENST00000552872 MT1BP07438 61 aa4.38□□□□□ -1.71
MMP19-209ENST00000552872 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
MMP19-209ENST00000552872 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
MMP19-209ENST00000552872 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
MMP19-209ENST00000552872 KMT2DO14686 5537 aa4.29□□□□□ -1.72
MMP19-209ENST00000552872 TNP1P09430 55 aa4.26□□□□□ -1.73
MMP19-209ENST00000552872 MT1XP80297 61 aa4.2□□□□□ -1.74
MMP19-209ENST00000552872 SYNE2Q8WXH0 6885 aaKnown RBP4.2□□□□□ -1.74
MMP19-209ENST00000552872 KRTAP10-5P60370 271 aa4.19□□□□□ -1.74
MMP19-209ENST00000552872 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
MMP19-209ENST00000552872 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
MMP19-209ENST00000552872 KRTAP19-6Q3LI70 58 aa4.16□□□□□ -1.74
MMP19-209ENST00000552872 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
MMP19-209ENST00000552872 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
MMP19-209ENST00000552872 NEBP20929 6669 aa4.03□□□□□ -1.76
MMP19-209ENST00000552872 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
MMP19-209ENST00000552872 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
MMP19-209ENST00000552872 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
MMP19-209ENST00000552872 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms