RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 IMUPQ9GZP8 106 aa8.67□□□□□ -1.02
PRPF40B-216ENST00000552301 MT-ATP8P03928 68 aa8.64□□□□□ -1.03
PRPF40B-216ENST00000552301 FAM236AA0A1B0GUQ0 79 aa8.63□□□□□ -1.03
PRPF40B-216ENST00000552301 FAM236BA0A1B0GV22 79 aa8.63□□□□□ -1.03
PRPF40B-216ENST00000552301 H3BPC8 53 aa8.63□□□□□ -1.03
PRPF40B-216ENST00000552301 A8MUN3 132 aa8.6□□□□□ -1.03
PRPF40B-216ENST00000552301 KLKP1Q107X0 134 aa8.6□□□□□ -1.03
PRPF40B-216ENST00000552301 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.58□□□□□ -1.04
PRPF40B-216ENST00000552301 NDUFC1O43677 76 aa8.53□□□□□ -1.04
PRPF40B-216ENST00000552301 SMIM20Q8N5G0 67 aa8.53□□□□□ -1.04
PRPF40B-216ENST00000552301 KRTAP9-7A8MTY7 169 aa8.51□□□□□ -1.05
PRPF40B-216ENST00000552301 FCGBPQ9Y6R7 5405 aaPredicted RBP8.5□□□□□ -1.05
PRPF40B-216ENST00000552301 TRAV7A0A075B6U4 112 aa8.48□□□□□ -1.05
PRPF40B-216ENST00000552301 KRTAP19-1Q8IUB9 90 aa8.43□□□□□ -1.06
PRPF40B-216ENST00000552301 DMAC1Q96GE9 116 aa8.41□□□□□ -1.06
PRPF40B-216ENST00000552301 H0YAA0 97 aa8.35□□□□□ -1.07
PRPF40B-216ENST00000552301 KRTAP19-6Q3LI70 58 aa8.33□□□□□ -1.08
PRPF40B-216ENST00000552301 CRIPTQ9P021 101 aa8.33□□□□□ -1.08
PRPF40B-216ENST00000552301 SPRR2GQ9BYE4 73 aa8.32□□□□□ -1.08
PRPF40B-216ENST00000552301 KRTAP4-8Q9BYQ9 185 aa8.31□□□□□ -1.08
PRPF40B-216ENST00000552301 MACF1Q9UPN3 7388 aaKnown RBP8.3□□□□□ -1.08
PRPF40B-216ENST00000552301 ADM2Q7Z4H4 148 aa8.29□□□□□ -1.08
PRPF40B-216ENST00000552301 SNURFQ9Y675 71 aa8.29□□□□□ -1.08
PRPF40B-216ENST00000552301 Q5VV11 94 aa8.28□□□□□ -1.08
PRPF40B-216ENST00000552301 SERP2Q8N6R1 65 aa8.28□□□□□ -1.08
PRPF40B-216ENST00000552301 ACYP2P14621 99 aa8.27□□□□□ -1.09
PRPF40B-216ENST00000552301 C20orf197Q8N268 126 aa8.24□□□□□ -1.09
PRPF40B-216ENST00000552301 KRTAP19-8Q3LI54 63 aa8.23□□□□□ -1.09
PRPF40B-216ENST00000552301 SYNE2Q8WXH0 6885 aaKnown RBP8.23□□□□□ -1.09
PRPF40B-216ENST00000552301 MT1BP07438 61 aa8.19□□□□□ -1.1
PRPF40B-216ENST00000552301 CHKB-CPT1BH3BT56 60 aa8.18□□□□□ -1.1
PRPF40B-216ENST00000552301 SPTSSBQ8NFR3 76 aa8.18□□□□□ -1.1
PRPF40B-216ENST00000552301 SPANXA2-OT1Q8N9U9 137 aa8.15□□□□□ -1.1
PRPF40B-216ENST00000552301 A6NN06 94 aa8.1□□□□□ -1.11
PRPF40B-216ENST00000552301 P0C880 135 aa8.09□□□□□ -1.11
PRPF40B-216ENST00000552301 R4GN34 69 aa8.09□□□□□ -1.11
PRPF40B-216ENST00000552301 COX7CP15954 63 aa8.08□□□□□ -1.12
PRPF40B-216ENST00000552301 M0QZ58 72 aa8.03□□□□□ -1.12
PRPF40B-216ENST00000552301 KRTAP10-5P60370 271 aa7.98□□□□□ -1.13
PRPF40B-216ENST00000552301 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
PRPF40B-216ENST00000552301 ANAPC13Q9BS18 74 aa7.94□□□□□ -1.14
PRPF40B-216ENST00000552301 KRTAP6-3Q3LI67 103 aa7.93□□□□□ -1.14
PRPF40B-216ENST00000552301 COA5Q86WW8 74 aa7.93□□□□□ -1.14
PRPF40B-216ENST00000552301 LINC01554Q52M75 96 aa7.92□□□□□ -1.14
PRPF40B-216ENST00000552301 KRTAP4-12Q9BQ66 201 aa7.91□□□□□ -1.14
PRPF40B-216ENST00000552301 LCE3BQ5TA77 95 aa7.89□□□□□ -1.15
PRPF40B-216ENST00000552301 H7BZZ5 65 aa7.88□□□□□ -1.15
PRPF40B-216ENST00000552301 CYSTM1Q9H1C7 97 aa7.86□□□□□ -1.15
PRPF40B-216ENST00000552301 PRO2289Q9P1D8 64 aa7.85□□□□□ -1.15
PRPF40B-216ENST00000552301 NEBP20929 6669 aa7.77□□□□□ -1.17
PRPF40B-216ENST00000552301 SEC61GP60059 68 aa7.76□□□□□ -1.17
PRPF40B-216ENST00000552301 MUC12Q9UKN1 5478 aa7.76□□□□□ -1.17
PRPF40B-216ENST00000552301 KRTAP9-9Q9BYP9 154 aa7.75□□□□□ -1.17
PRPF40B-216ENST00000552301 KRTAP9-4Q9BYQ2 154 aa7.75□□□□□ -1.17
PRPF40B-216ENST00000552301 MT1XP80297 61 aa7.74□□□□□ -1.17
PRPF40B-216ENST00000552301 SERP1Q9Y6X1 66 aa7.73□□□□□ -1.17
PRPF40B-216ENST00000552301 CCDC179H3BU77 68 aa7.72□□□□□ -1.17
PRPF40B-216ENST00000552301 KRTAP4-8A0A0G2JLE6 195 aa7.65□□□□□ -1.18
PRPF40B-216ENST00000552301 ATP5EP56381 51 aaPredicted RBP7.63□□□□□ -1.19
PRPF40B-216ENST00000552301 KRTAP13-4Q3LI77 160 aa7.63□□□□□ -1.19
PRPF40B-216ENST00000552301 A0A1B0GU33 70 aa7.55□□□□□ -1.2
PRPF40B-216ENST00000552301 A0A1B0GU69 56 aa7.54□□□□□ -1.2
PRPF40B-216ENST00000552301 KRTAP12-2P59991 146 aa7.53□□□□□ -1.2
PRPF40B-216ENST00000552301 A0A0D9SG42 100 aa7.5□□□□□ -1.21
PRPF40B-216ENST00000552301 KRTAP5-9P26371 169 aa7.5□□□□□ -1.21
PRPF40B-216ENST00000552301 CAMK2N1Q7Z7J9 78 aa7.5□□□□□ -1.21
PRPF40B-216ENST00000552301 TMEM258P61165 79 aa7.49□□□□□ -1.21
PRPF40B-216ENST00000552301 SPATA8Q6RVD6 105 aa7.49□□□□□ -1.21
PRPF40B-216ENST00000552301 KMT2DO14686 5537 aa7.48□□□□□ -1.21
PRPF40B-216ENST00000552301 MDN1Q9NU22 5596 aa7.47□□□□□ -1.21
PRPF40B-216ENST00000552301 KRTAP20-1Q3LI63 56 aa7.43□□□□□ -1.22
PRPF40B-216ENST00000552301 KRTAP8-1Q8IUC2 63 aa7.43□□□□□ -1.22
PRPF40B-216ENST00000552301 PRR15LQ9BU68 103 aa7.41□□□□□ -1.22
PRPF40B-216ENST00000552301 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
PRPF40B-216ENST00000552301 LCE1DQ5T752 114 aa7.39□□□□□ -1.23
PRPF40B-216ENST00000552301 SPINT4Q6UDR6 99 aa7.39□□□□□ -1.23
PRPF40B-216ENST00000552301 KRTAP4-7Q9BYR0 210 aa7.39□□□□□ -1.23
PRPF40B-216ENST00000552301 SPRR2FQ96RM1 72 aa7.38□□□□□ -1.23
PRPF40B-216ENST00000552301 SMIM26A0A096LP01 95 aa7.37□□□□□ -1.23
PRPF40B-216ENST00000552301 PCP4P48539 62 aa7.37□□□□□ -1.23
PRPF40B-216ENST00000552301 KRTAP10-12P60413 245 aa7.35□□□□□ -1.23
PRPF40B-216ENST00000552301 LINC01558Q9Y6Z2 57 aa7.31□□□□□ -1.24
PRPF40B-216ENST00000552301 KRTAP12-1P59990 96 aa7.3□□□□□ -1.24
PRPF40B-216ENST00000552301 A8MU10 97 aa7.25□□□□□ -1.25
PRPF40B-216ENST00000552301 SPRR2EP22531 72 aa7.22□□□□□ -1.25
PRPF40B-216ENST00000552301 SPRR2BP35325 72 aa7.22□□□□□ -1.25
PRPF40B-216ENST00000552301 SPRR2AP35326 72 aa7.22□□□□□ -1.25
PRPF40B-216ENST00000552301 KRTAP4-9Q9BYQ8 210 aa7.2□□□□□ -1.26
PRPF40B-216ENST00000552301 KRTAP2-3P0C7H8 128 aa7.18□□□□□ -1.26
PRPF40B-216ENST00000552301 KRTAP2-4Q9BYR9 128 aa7.18□□□□□ -1.26
PRPF40B-216ENST00000552301 UQCR11O14957 56 aa7.13□□□□□ -1.27
PRPF40B-216ENST00000552301 LCE1AQ5T7P2 110 aa7.1□□□□□ -1.27
PRPF40B-216ENST00000552301 KRTAP4-2Q9BYR5 136 aa7.08□□□□□ -1.28
PRPF40B-216ENST00000552301 V9GYY9 64 aa7.07□□□□□ -1.28
PRPF40B-216ENST00000552301 MIR22HGQ0VDD5 57 aa6.99□□□□□ -1.29
PRPF40B-216ENST00000552301 LCE4AQ5TA78 99 aa6.99□□□□□ -1.29
PRPF40B-216ENST00000552301 SPRR2DP22532 72 aa6.98□□□□□ -1.29
PRPF40B-216ENST00000552301 PSPHP1O15172 72 aa6.97□□□□□ -1.29
PRPF40B-216ENST00000552301 Q1T7F1 81 aa6.97□□□□□ -1.29
PRPF40B-216ENST00000552301 TNP1P09430 55 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms