RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 KRTAP9-3Q9BYQ3 159 aa8.74□□□□□ -1.01
DDX54-209ENST00000551912 NDUFC1O43677 76 aa8.72□□□□□ -1.01
DDX54-209ENST00000551912 DMAC1Q96GE9 116 aa8.72□□□□□ -1.01
DDX54-209ENST00000551912 SNURFQ9Y675 71 aa8.72□□□□□ -1.01
DDX54-209ENST00000551912 C20orf197Q8N268 126 aa8.69□□□□□ -1.02
DDX54-209ENST00000551912 FSIP2Q5CZC0 6907 aa8.65□□□□□ -1.03
DDX54-209ENST00000551912 KRTAP9-6A0A140TA67 174 aa8.62□□□□□ -1.03
DDX54-209ENST00000551912 CRCT1Q9UGL9 99 aa8.62□□□□□ -1.03
DDX54-209ENST00000551912 LCE2BO14633 110 aa8.61□□□□□ -1.03
DDX54-209ENST00000551912 COX7CP15954 63 aa8.61□□□□□ -1.03
DDX54-209ENST00000551912 ACYP2P14621 99 aa8.59□□□□□ -1.03
DDX54-209ENST00000551912 USH2AO75445 5202 aa8.58□□□□□ -1.04
DDX54-209ENST00000551912 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
DDX54-209ENST00000551912 H0YAA0 97 aa8.53□□□□□ -1.04
DDX54-209ENST00000551912 ANAPC13Q9BS18 74 aa8.5□□□□□ -1.05
DDX54-209ENST00000551912 ADM2Q7Z4H4 148 aa8.46□□□□□ -1.06
DDX54-209ENST00000551912 KRTAP19-1Q8IUB9 90 aa8.45□□□□□ -1.06
DDX54-209ENST00000551912 CHKB-CPT1BH3BT56 60 aa8.44□□□□□ -1.06
DDX54-209ENST00000551912 SPTSSBQ8NFR3 76 aa8.43□□□□□ -1.06
DDX54-209ENST00000551912 CRIPTQ9P021 101 aa8.43□□□□□ -1.06
DDX54-209ENST00000551912 SSPOA2VEC9 5147 aa8.42□□□□□ -1.06
DDX54-209ENST00000551912 SPRR2GQ9BYE4 73 aa8.41□□□□□ -1.06
DDX54-209ENST00000551912 CYSTM1Q9H1C7 97 aa8.4□□□□□ -1.06
DDX54-209ENST00000551912 H7BZZ5 65 aa8.39□□□□□ -1.07
DDX54-209ENST00000551912 CCDC179H3BU77 68 aa8.3□□□□□ -1.08
DDX54-209ENST00000551912 P0C880 135 aa8.3□□□□□ -1.08
DDX54-209ENST00000551912 KRTAP19-8Q3LI54 63 aa8.3□□□□□ -1.08
DDX54-209ENST00000551912 Q5VV11 94 aa8.29□□□□□ -1.08
DDX54-209ENST00000551912 COA5Q86WW8 74 aa8.29□□□□□ -1.08
DDX54-209ENST00000551912 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
DDX54-209ENST00000551912 KRTAP19-6Q3LI70 58 aa8.26□□□□□ -1.09
DDX54-209ENST00000551912 MT1BP07438 61 aa8.24□□□□□ -1.09
DDX54-209ENST00000551912 R4GN34 69 aa8.22□□□□□ -1.09
DDX54-209ENST00000551912 FCGBPQ9Y6R7 5405 aaPredicted RBP8.18□□□□□ -1.1
DDX54-209ENST00000551912 M0QZ58 72 aa8.17□□□□□ -1.1
DDX54-209ENST00000551912 ATP5EP56381 51 aaPredicted RBP8.11□□□□□ -1.11
DDX54-209ENST00000551912 SEC61GP60059 68 aa8.04□□□□□ -1.12
DDX54-209ENST00000551912 A6NN06 94 aa8.03□□□□□ -1.12
DDX54-209ENST00000551912 TMEM258P61165 79 aa8.03□□□□□ -1.12
DDX54-209ENST00000551912 LINC01554Q52M75 96 aa8.03□□□□□ -1.12
DDX54-209ENST00000551912 PLAC4Q8WY50 150 aa8.01□□□□□ -1.13
DDX54-209ENST00000551912 SERP1Q9Y6X1 66 aa8.01□□□□□ -1.13
DDX54-209ENST00000551912 KRTAP9-1A8MXZ3 250 aaPredicted RBP8□□□□□ -1.13
DDX54-209ENST00000551912 KRTAP10-5P60370 271 aa7.98□□□□□ -1.13
DDX54-209ENST00000551912 KRTAP13-4Q3LI77 160 aa7.89□□□□□ -1.15
DDX54-209ENST00000551912 A0A1B0GU69 56 aa7.87□□□□□ -1.15
DDX54-209ENST00000551912 PRO2289Q9P1D8 64 aa7.86□□□□□ -1.15
DDX54-209ENST00000551912 A0A1B0GU33 70 aa7.85□□□□□ -1.15
DDX54-209ENST00000551912 MACF1Q9UPN3 7388 aaKnown RBP7.84□□□□□ -1.15
DDX54-209ENST00000551912 MT1XP80297 61 aa7.83□□□□□ -1.16
DDX54-209ENST00000551912 KRTAP9-7A8MTY7 169 aa7.79□□□□□ -1.16
DDX54-209ENST00000551912 SPATA8Q6RVD6 105 aa7.77□□□□□ -1.17
DDX54-209ENST00000551912 PRR15LQ9BU68 103 aa7.76□□□□□ -1.17
DDX54-209ENST00000551912 LINC01558Q9Y6Z2 57 aa7.75□□□□□ -1.17
DDX54-209ENST00000551912 A0A0D9SG42 100 aa7.72□□□□□ -1.17
DDX54-209ENST00000551912 PCP4P48539 62 aa7.7□□□□□ -1.18
DDX54-209ENST00000551912 SYNE2Q8WXH0 6885 aaKnown RBP7.65□□□□□ -1.19
DDX54-209ENST00000551912 SMIM26A0A096LP01 95 aa7.63□□□□□ -1.19
DDX54-209ENST00000551912 CAMK2N1Q7Z7J9 78 aa7.62□□□□□ -1.19
DDX54-209ENST00000551912 KRTAP6-3Q3LI67 103 aa7.6□□□□□ -1.19
DDX54-209ENST00000551912 SPINT4Q6UDR6 99 aa7.59□□□□□ -1.19
DDX54-209ENST00000551912 KRTAP12-2P59991 146 aa7.57□□□□□ -1.2
DDX54-209ENST00000551912 KRTAP12-1P59990 96 aa7.56□□□□□ -1.2
DDX54-209ENST00000551912 A8MU10 97 aa7.55□□□□□ -1.2
DDX54-209ENST00000551912 V9GYY9 64 aa7.54□□□□□ -1.2
DDX54-209ENST00000551912 UQCR11O14957 56 aa7.5□□□□□ -1.21
DDX54-209ENST00000551912 Q1T7F1 81 aa7.49□□□□□ -1.21
DDX54-209ENST00000551912 KRTAP10-7P60409 375 aaPredicted RBP7.47□□□□□ -1.21
DDX54-209ENST00000551912 KMT2DO14686 5537 aa7.46□□□□□ -1.21
DDX54-209ENST00000551912 KRTAP10-12P60413 245 aa7.43□□□□□ -1.22
DDX54-209ENST00000551912 RPS28P62857 69 aaKnown RBP7.43□□□□□ -1.22
DDX54-209ENST00000551912 PSPHP1O15172 72 aa7.42□□□□□ -1.22
DDX54-209ENST00000551912 KRTAP5-9P26371 169 aa7.41□□□□□ -1.22
DDX54-209ENST00000551912 KRTAP8-1Q8IUC2 63 aa7.39□□□□□ -1.23
DDX54-209ENST00000551912 KRTAP4-8A0A0G2JLE6 195 aa7.36□□□□□ -1.23
DDX54-209ENST00000551912 MIR22HGQ0VDD5 57 aa7.36□□□□□ -1.23
DDX54-209ENST00000551912 KRTAP4-8Q9BYQ9 185 aa7.36□□□□□ -1.23
DDX54-209ENST00000551912 MUC12Q9UKN1 5478 aa7.32□□□□□ -1.24
DDX54-209ENST00000551912 SPRR2FQ96RM1 72 aa7.29□□□□□ -1.24
DDX54-209ENST00000551912 A6NED7 52 aa7.2□□□□□ -1.26
DDX54-209ENST00000551912 C10orf95Q9H7T3 257 aa7.19□□□□□ -1.26
DDX54-209ENST00000551912 MDN1Q9NU22 5596 aa7.17□□□□□ -1.26
DDX54-209ENST00000551912 K7ERS5 55 aa7.17□□□□□ -1.26
DDX54-209ENST00000551912 NEBP20929 6669 aa7.16□□□□□ -1.26
DDX54-209ENST00000551912 TNP1P09430 55 aa7.12□□□□□ -1.27
DDX54-209ENST00000551912 SPRR2EP22531 72 aa7.09□□□□□ -1.27
DDX54-209ENST00000551912 SPRR2BP35325 72 aa7.09□□□□□ -1.27
DDX54-209ENST00000551912 SPRR2AP35326 72 aa7.09□□□□□ -1.27
DDX54-209ENST00000551912 LCE1AQ5T7P2 110 aa7.04□□□□□ -1.28
DDX54-209ENST00000551912 KRTAP19-7Q3SYF9 63 aa6.98□□□□□ -1.29
DDX54-209ENST00000551912 CDC42SE1Q9NRR8 79 aa6.95□□□□□ -1.3
DDX54-209ENST00000551912 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
DDX54-209ENST00000551912 MT1EP04732 61 aa6.91□□□□□ -1.3
DDX54-209ENST00000551912 KRTAP19-5Q3LI72 72 aa6.91□□□□□ -1.3
DDX54-209ENST00000551912 KRTAP25-1Q3LHN0 102 aa6.9□□□□□ -1.3
DDX54-209ENST00000551912 KRTAP20-1Q3LI63 56 aa6.87□□□□□ -1.31
DDX54-209ENST00000551912 SPRR2DP22532 72 aa6.85□□□□□ -1.31
DDX54-209ENST00000551912 KRTAP2-3P0C7H8 128 aa6.79□□□□□ -1.32
DDX54-209ENST00000551912 KRTAP2-4Q9BYR9 128 aa6.79□□□□□ -1.32
DDX54-209ENST00000551912 KRTAP19-3Q7Z4W3 81 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms