RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	KRTAP10-10	P60014	251 aa		4.44	□□□□□ -1.7
ATXN2-223	ENST00000551551	ANAPC13	Q9BS18	74 aa		4.43	□□□□□ -1.7
ATXN2-223	ENST00000551551	PMAIP1	Q13794	54 aa		4.42	□□□□□ -1.7
ATXN2-223	ENST00000551551	PRO0461	Q9UI25	63 aa		4.42	□□□□□ -1.7
ATXN2-223	ENST00000551551	IGKV2D-30	A0A075B6S6	120 aa		4.41	□□□□□ -1.7
ATXN2-223	ENST00000551551	IGKV2-30	P06310	120 aa		4.41	□□□□□ -1.7
ATXN2-223	ENST00000551551	SCGB1A1	P11684	91 aa		4.4	□□□□□ -1.71
ATXN2-223	ENST00000551551	MP68	P56378	58 aa		4.4	□□□□□ -1.71
ATXN2-223	ENST00000551551	MT2A	P02795	61 aa		4.37	□□□□□ -1.71
ATXN2-223	ENST00000551551	ETDB	Q3ZM63	59 aa		4.37	□□□□□ -1.71
ATXN2-223	ENST00000551551	ATP5EP2	Q5VTU8	51 aa		4.37	□□□□□ -1.71
ATXN2-223	ENST00000551551		Q5W150	140 aa		4.36	□□□□□ -1.71
ATXN2-223	ENST00000551551		Q8N9L7	120 aa		4.36	□□□□□ -1.71
ATXN2-223	ENST00000551551	CAMK2N1	Q7Z7J9	78 aa		4.35	□□□□□ -1.71
ATXN2-223	ENST00000551551	ATOX1	O00244	68 aa		4.32	□□□□□ -1.72
ATXN2-223	ENST00000551551	CSAG1	Q6PB30	78 aa		4.32	□□□□□ -1.72
ATXN2-223	ENST00000551551	MT1F	P04733	61 aa		4.31	□□□□□ -1.72
ATXN2-223	ENST00000551551	LOC101927531	A0A1B0GV80	90 aa		4.3	□□□□□ -1.72
ATXN2-223	ENST00000551551	C1orf64	Q8NEQ6	169 aa		4.3	□□□□□ -1.72
ATXN2-223	ENST00000551551	UQCRQ	O14949	82 aa		4.29	□□□□□ -1.72
ATXN2-223	ENST00000551551	TRAV22	A0A0B4J277	110 aa		4.28	□□□□□ -1.72
ATXN2-223	ENST00000551551	NDUFAF8	A1L188	74 aa		4.28	□□□□□ -1.72
ATXN2-223	ENST00000551551		J3QR89	54 aa		4.28	□□□□□ -1.72
ATXN2-223	ENST00000551551		S4R3F8	94 aa		4.28	□□□□□ -1.72
ATXN2-223	ENST00000551551	LINC00643	Q86TS7	51 aa		4.27	□□□□□ -1.73
ATXN2-223	ENST00000551551	CYP4F30P	Q9H0H9	118 aa		4.27	□□□□□ -1.73
ATXN2-223	ENST00000551551	HIST1H4A	P62805	103 aa	Known RBP	4.26	□□□□□ -1.73
ATXN2-223	ENST00000551551	SYNE2	Q8WXH0	6885 aa	Known RBP	4.25	□□□□□ -1.73
ATXN2-223	ENST00000551551	FAM236A	A0A1B0GUQ0	79 aa		4.24	□□□□□ -1.73
ATXN2-223	ENST00000551551	FAM236B	A0A1B0GV22	79 aa		4.24	□□□□□ -1.73
ATXN2-223	ENST00000551551		A8MUN3	132 aa		4.24	□□□□□ -1.73
ATXN2-223	ENST00000551551	CRIPT	Q9P021	101 aa		4.23	□□□□□ -1.73
ATXN2-223	ENST00000551551	LUZP6	Q538Z0	58 aa		4.21	□□□□□ -1.74
ATXN2-223	ENST00000551551	IMUP	Q9GZP8	106 aa		4.21	□□□□□ -1.74
ATXN2-223	ENST00000551551	NDUFC1	O43677	76 aa		4.2	□□□□□ -1.74
ATXN2-223	ENST00000551551	KRTAP19-6	Q3LI70	58 aa		4.2	□□□□□ -1.74
ATXN2-223	ENST00000551551		H3BPC8	53 aa		4.19	□□□□□ -1.74
ATXN2-223	ENST00000551551	LCA10	Q71F78	164 aa		4.19	□□□□□ -1.74
ATXN2-223	ENST00000551551	USH2A	O75445	5202 aa		4.19	□□□□□ -1.74
ATXN2-223	ENST00000551551		H0Y9P7	68 aa		4.18	□□□□□ -1.74
ATXN2-223	ENST00000551551	SSPO	A2VEC9	5147 aa		4.18	□□□□□ -1.74
ATXN2-223	ENST00000551551		A0A1B0GV90	55 aa		4.15	□□□□□ -1.75
ATXN2-223	ENST00000551551		H0YAA0	97 aa		4.15	□□□□□ -1.75
ATXN2-223	ENST00000551551	KLKP1	Q107X0	134 aa		4.15	□□□□□ -1.75
ATXN2-223	ENST00000551551		Q5VV11	94 aa		4.13	□□□□□ -1.75
ATXN2-223	ENST00000551551	LINC00208	Q96KT6	92 aa		4.13	□□□□□ -1.75
ATXN2-223	ENST00000551551	SPRR2G	Q9BYE4	73 aa		4.13	□□□□□ -1.75
ATXN2-223	ENST00000551551	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN2-223	ENST00000551551	MACF1	Q9UPN3	7388 aa	Known RBP	4.11	□□□□□ -1.75
ATXN2-223	ENST00000551551		K7ERS5	55 aa		4.11	□□□□□ -1.75
ATXN2-223	ENST00000551551	C20orf197	Q8N268	126 aa		4.11	□□□□□ -1.75
ATXN2-223	ENST00000551551	RPS28	P62857	69 aa	Known RBP	4.09	□□□□□ -1.75
ATXN2-223	ENST00000551551		A0A087WVE0	104 aa		4.08	□□□□□ -1.76
ATXN2-223	ENST00000551551	KRTAP19-8	Q3LI54	63 aa		4.07	□□□□□ -1.76
ATXN2-223	ENST00000551551	KTN1-AS1	Q86SY8	53 aa		4.07	□□□□□ -1.76
ATXN2-223	ENST00000551551		A6NN06	94 aa		4.06	□□□□□ -1.76
ATXN2-223	ENST00000551551	NEB	P20929	6669 aa		4.06	□□□□□ -1.76
ATXN2-223	ENST00000551551		K7ERU9	68 aa		4.05	□□□□□ -1.76
ATXN2-223	ENST00000551551	SPTSSB	Q8NFR3	76 aa		4.05	□□□□□ -1.76
ATXN2-223	ENST00000551551	ADM2	Q7Z4H4	148 aa		4.03	□□□□□ -1.76
ATXN2-223	ENST00000551551	TRAV7	A0A075B6U4	112 aa		4.02	□□□□□ -1.77
ATXN2-223	ENST00000551551		A6NED7	52 aa		4.02	□□□□□ -1.77
ATXN2-223	ENST00000551551	ACYP2	P14621	99 aa		4.02	□□□□□ -1.77
ATXN2-223	ENST00000551551	KRTAP6-3	Q3LI67	103 aa		4.01	□□□□□ -1.77
ATXN2-223	ENST00000551551	DMAC1	Q96GE9	116 aa		4	□□□□□ -1.77
ATXN2-223	ENST00000551551	PRO2289	Q9P1D8	64 aa		4	□□□□□ -1.77
ATXN2-223	ENST00000551551	PLAC4	Q8WY50	150 aa		3.98	□□□□□ -1.77
ATXN2-223	ENST00000551551		R4GN34	69 aa		3.98	□□□□□ -1.77
ATXN2-223	ENST00000551551	MT1B	P07438	61 aa		3.97	□□□□□ -1.77
ATXN2-223	ENST00000551551	KRTAP10-5	P60370	271 aa		3.97	□□□□□ -1.77
ATXN2-223	ENST00000551551	MUC12	Q9UKN1	5478 aa		3.95	□□□□□ -1.78
ATXN2-223	ENST00000551551	LINC01554	Q52M75	96 aa		3.94	□□□□□ -1.78
ATXN2-223	ENST00000551551	SPANXA2-OT1	Q8N9U9	137 aa		3.94	□□□□□ -1.78
ATXN2-223	ENST00000551551	CHKB-CPT1B	H3BT56	60 aa		3.91	□□□□□ -1.78
ATXN2-223	ENST00000551551	KRTAP20-1	Q3LI63	56 aa		3.91	□□□□□ -1.78
ATXN2-223	ENST00000551551		M0QZ58	72 aa		3.88	□□□□□ -1.79
ATXN2-223	ENST00000551551	BRK1	Q8WUW1	75 aa		3.88	□□□□□ -1.79
ATXN2-223	ENST00000551551	MT-ATP8	P03928	68 aa		3.87	□□□□□ -1.79
ATXN2-223	ENST00000551551	SERP2	Q8N6R1	65 aa		3.85	□□□□□ -1.79
ATXN2-223	ENST00000551551		P0C880	135 aa		3.83	□□□□□ -1.8
ATXN2-223	ENST00000551551	GPR98	Q8WXG9	6306 aa		3.82	□□□□□ -1.8
ATXN2-223	ENST00000551551	KRTAP5-9	P26371	169 aa		3.81	□□□□□ -1.8
ATXN2-223	ENST00000551551	KRTAP12-2	P59991	146 aa		3.78	□□□□□ -1.8
ATXN2-223	ENST00000551551	SNURF	Q9Y675	71 aa		3.78	□□□□□ -1.8
ATXN2-223	ENST00000551551	SERP1	Q9Y6X1	66 aa		3.77	□□□□□ -1.81
ATXN2-223	ENST00000551551	MT1X	P80297	61 aa		3.75	□□□□□ -1.81
ATXN2-223	ENST00000551551	KMT2D	O14686	5537 aa		3.75	□□□□□ -1.81
ATXN2-223	ENST00000551551		A0A1B0GU33	70 aa		3.72	□□□□□ -1.81
ATXN2-223	ENST00000551551	COX7C	P15954	63 aa		3.72	□□□□□ -1.81
ATXN2-223	ENST00000551551	KRTAP8-1	Q8IUC2	63 aa		3.72	□□□□□ -1.81
ATXN2-223	ENST00000551551	KRTAP25-1	Q3LHN0	102 aa		3.68	□□□□□ -1.82
ATXN2-223	ENST00000551551	COA5	Q86WW8	74 aa		3.68	□□□□□ -1.82
ATXN2-223	ENST00000551551	SPRR2F	Q96RM1	72 aa		3.68	□□□□□ -1.82
ATXN2-223	ENST00000551551	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.67	□□□□□ -1.82
ATXN2-223	ENST00000551551	MDN1	Q9NU22	5596 aa		3.65	□□□□□ -1.82
ATXN2-223	ENST00000551551	KRTAP2-3	P0C7H8	128 aa		3.65	□□□□□ -1.83
ATXN2-223	ENST00000551551	KRTAP10-7	P60409	375 aa	Predicted RBP	3.65	□□□□□ -1.83
ATXN2-223	ENST00000551551	SPINT4	Q6UDR6	99 aa		3.65	□□□□□ -1.83
ATXN2-223	ENST00000551551	KRTAP2-4	Q9BYR9	128 aa		3.65	□□□□□ -1.83
ATXN2-223	ENST00000551551	CCDC179	H3BU77	68 aa		3.63	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms