RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 SEC61BP60468 96 aaKnown RBP9.99□□□□□ -0.81
SSH1-209ENST00000551165 MUC17Q685J3 4493 aa9.96□□□□□ -0.81
SSH1-209ENST00000551165 LINC01558Q9Y6Z2 57 aa9.96□□□□□ -0.82
SSH1-209ENST00000551165 PRR15LQ9BU68 103 aa9.95□□□□□ -0.82
SSH1-209ENST00000551165 Q5VV11 94 aa9.91□□□□□ -0.82
SSH1-209ENST00000551165 MUC2Q02817 5179 aa9.9□□□□□ -0.82
SSH1-209ENST00000551165 LCA10Q71F78 164 aa9.85□□□□□ -0.83
SSH1-209ENST00000551165 KRTAP3-3Q9BYR6 98 aa9.85□□□□□ -0.83
SSH1-209ENST00000551165 H3BS24 57 aa9.84□□□□□ -0.83
SSH1-209ENST00000551165 RBM12B-AS1Q9P1G2 102 aa9.83□□□□□ -0.84
SSH1-209ENST00000551165 H1FX-AS1Q4G0G2 97 aa9.82□□□□□ -0.84
SSH1-209ENST00000551165 S4R3F8 94 aa9.79□□□□□ -0.84
SSH1-209ENST00000551165 A0A1B0GU69 56 aa9.78□□□□□ -0.84
SSH1-209ENST00000551165 SPTSSBQ8NFR3 76 aa9.78□□□□□ -0.84
SSH1-209ENST00000551165 KRTAP19-2Q3LHN2 52 aa9.7□□□□□ -0.86
SSH1-209ENST00000551165 KTN1-AS1Q86SY8 53 aa9.7□□□□□ -0.86
SSH1-209ENST00000551165 A8MU10 97 aa9.68□□□□□ -0.86
SSH1-209ENST00000551165 UBR4Q5T4S7 5183 aa9.68□□□□□ -0.86
SSH1-209ENST00000551165 A6NED7 52 aa9.65□□□□□ -0.86
SSH1-209ENST00000551165 RNF213Q63HN8 5207 aa9.57□□□□□ -0.88
SSH1-209ENST00000551165 KRTAP3-2Q9BYR7 98 aa9.53□□□□□ -0.88
SSH1-209ENST00000551165 CSAG1Q6PB30 78 aa9.52□□□□□ -0.88
SSH1-209ENST00000551165 KRTAP10-6P60371 365 aaPredicted RBP9.52□□□□□ -0.89
SSH1-209ENST00000551165 UQCR11O14957 56 aa9.47□□□□□ -0.89
SSH1-209ENST00000551165 CDC42SE1Q9NRR8 79 aa9.46□□□□□ -0.89
SSH1-209ENST00000551165 P0C880 135 aa9.46□□□□□ -0.9
SSH1-209ENST00000551165 FAT4Q6V0I7 4981 aa9.45□□□□□ -0.9
SSH1-209ENST00000551165 A0A1B0GU33 70 aa9.45□□□□□ -0.9
SSH1-209ENST00000551165 FLGP20930 4061 aaPredicted RBP9.44□□□□□ -0.9
SSH1-209ENST00000551165 ADM2Q7Z4H4 148 aa9.43□□□□□ -0.9
SSH1-209ENST00000551165 LCE2CQ5TA81 110 aa9.42□□□□□ -0.9
SSH1-209ENST00000551165 MIR22HGQ0VDD5 57 aa9.42□□□□□ -0.9
SSH1-209ENST00000551165 SPATA8Q6RVD6 105 aa9.4□□□□□ -0.9
SSH1-209ENST00000551165 H0YAA0 97 aa9.39□□□□□ -0.91
SSH1-209ENST00000551165 KRTAP13-4Q3LI77 160 aa9.34□□□□□ -0.91
SSH1-209ENST00000551165 A6NN06 94 aa9.32□□□□□ -0.92
SSH1-209ENST00000551165 LORP23490 312 aaPredicted RBP9.21□□□□□ -0.94
SSH1-209ENST00000551165 MT1HP80294 61 aa9.19□□□□□ -0.94
SSH1-209ENST00000551165 A0A0D9SG42 100 aa9.15□□□□□ -0.94
SSH1-209ENST00000551165 LINC01554Q52M75 96 aa9.15□□□□□ -0.94
SSH1-209ENST00000551165 M0R2T5 61 aa9.09□□□□□ -0.95
SSH1-209ENST00000551165 M0QZ58 72 aa9.06□□□□□ -0.96
SSH1-209ENST00000551165 R4GN34 69 aa9.04□□□□□ -0.96
SSH1-209ENST00000551165 A0A0A0MQY5 61 aa8.96□□□□□ -0.98
SSH1-209ENST00000551165 KRTAP12-2P59991 146 aa8.94□□□□□ -0.98
SSH1-209ENST00000551165 KRTAP12-1P59990 96 aa8.92□□□□□ -0.98
SSH1-209ENST00000551165 PRAC1Q96KF2 57 aa8.91□□□□□ -0.98
SSH1-209ENST00000551165 KRTAP9-8Q9BYQ0 159 aa8.89□□□□□ -0.99
SSH1-209ENST00000551165 SPINT4Q6UDR6 99 aa8.88□□□□□ -0.99
SSH1-209ENST00000551165 MT2AP02795 61 aa8.87□□□□□ -0.99
SSH1-209ENST00000551165 MT1FP04733 61 aa8.85□□□□□ -0.99
SSH1-209ENST00000551165 K7ERS5 55 aa8.84□□□□□ -0.99
SSH1-209ENST00000551165 KRTAP10-10P60014 251 aa8.78□□□□□ -1
SSH1-209ENST00000551165 CRIPTQ9P021 101 aa8.78□□□□□ -1
SSH1-209ENST00000551165 KRTAP19-1Q8IUB9 90 aa8.73□□□□□ -1.01
SSH1-209ENST00000551165 LCE2AQ5TA79 106 aaPredicted RBP8.71□□□□□ -1.02
SSH1-209ENST00000551165 SPRR2GQ9BYE4 73 aa8.69□□□□□ -1.02
SSH1-209ENST00000551165 ROMO1P60602 79 aa8.59□□□□□ -1.03
SSH1-209ENST00000551165 KRTAP9-3Q9BYQ3 159 aa8.54□□□□□ -1.04
SSH1-209ENST00000551165 CAMK2N1Q7Z7J9 78 aa8.48□□□□□ -1.05
SSH1-209ENST00000551165 C10orf95Q9H7T3 257 aa8.46□□□□□ -1.06
SSH1-209ENST00000551165 KRTAP19-8Q3LI54 63 aa8.43□□□□□ -1.06
SSH1-209ENST00000551165 PLAC4Q8WY50 150 aa8.4□□□□□ -1.07
SSH1-209ENST00000551165 MT1BP07438 61 aa8.39□□□□□ -1.07
SSH1-209ENST00000551165 LCE2BO14633 110 aa8.34□□□□□ -1.07
SSH1-209ENST00000551165 KRTAP25-1Q3LHN0 102 aa8.3□□□□□ -1.08
SSH1-209ENST00000551165 USH2AO75445 5202 aa8.24□□□□□ -1.09
SSH1-209ENST00000551165 MT1XP80297 61 aa8.15□□□□□ -1.1
SSH1-209ENST00000551165 KRTAP10-5P60370 271 aa8.14□□□□□ -1.11
SSH1-209ENST00000551165 TNP1P09430 55 aa8.05□□□□□ -1.12
SSH1-209ENST00000551165 NDUFAF8A1L188 74 aa7.99□□□□□ -1.13
SSH1-209ENST00000551165 LUZP6Q538Z0 58 aa7.93□□□□□ -1.14
SSH1-209ENST00000551165 FSIP2Q5CZC0 6907 aa7.9□□□□□ -1.14
SSH1-209ENST00000551165 KRTAP10-7P60409 375 aaPredicted RBP7.88□□□□□ -1.15
SSH1-209ENST00000551165 PRO2289Q9P1D8 64 aa7.88□□□□□ -1.15
SSH1-209ENST00000551165 SSPOA2VEC9 5147 aa7.88□□□□□ -1.15
SSH1-209ENST00000551165 LCE3AQ5TA76 89 aa7.81□□□□□ -1.16
SSH1-209ENST00000551165 PP632Q6XCG6 107 aa7.81□□□□□ -1.16
SSH1-209ENST00000551165 LCE2DQ5TA82 110 aaPredicted RBP7.76□□□□□ -1.17
SSH1-209ENST00000551165 KRTAP15-1Q3LI76 137 aa7.75□□□□□ -1.17
SSH1-209ENST00000551165 KRTAP23-1A1A580 65 aa7.75□□□□□ -1.17
SSH1-209ENST00000551165 KRTAP10-12P60413 245 aa7.72□□□□□ -1.17
SSH1-209ENST00000551165 KMT2DO14686 5537 aa7.7□□□□□ -1.18
SSH1-209ENST00000551165 KRTAP19-6Q3LI70 58 aa7.68□□□□□ -1.18
SSH1-209ENST00000551165 KRTAP4-8A0A0G2JLE6 195 aa7.59□□□□□ -1.19
SSH1-209ENST00000551165 KRTAP4-8Q9BYQ9 185 aa7.59□□□□□ -1.19
SSH1-209ENST00000551165 KRTAP8-1Q8IUC2 63 aa7.56□□□□□ -1.2
SSH1-209ENST00000551165 FCGBPQ9Y6R7 5405 aaPredicted RBP7.51□□□□□ -1.21
SSH1-209ENST00000551165 KRTAP9-2Q9BYQ4 174 aa7.48□□□□□ -1.21
SSH1-209ENST00000551165 KRTAP12-3P60328 96 aa7.44□□□□□ -1.22
SSH1-209ENST00000551165 KRTAP19-5Q3LI72 72 aa7.41□□□□□ -1.22
SSH1-209ENST00000551165 KRTAP19-7Q3SYF9 63 aa7.28□□□□□ -1.24
SSH1-209ENST00000551165 CRCT1Q9UGL9 99 aa7.22□□□□□ -1.25
SSH1-209ENST00000551165 MACF1Q9UPN3 7388 aaKnown RBP7.12□□□□□ -1.27
SSH1-209ENST00000551165 MT1EP04732 61 aa7.11□□□□□ -1.27
SSH1-209ENST00000551165 SPRR5A0A1B0GTR4 108 aa7.08□□□□□ -1.28
SSH1-209ENST00000551165 MUC12Q9UKN1 5478 aa7.03□□□□□ -1.28
SSH1-209ENST00000551165 MT1LQ93083 61 aa6.99□□□□□ -1.29
SSH1-209ENST00000551165 SYNE2Q8WXH0 6885 aaKnown RBP6.96□□□□□ -1.29
SSH1-209ENST00000551165 LCE3CQ5T5A8 94 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms