RNA–Protein interactions for RNA: ENST00000551132.5

CNOT2-228, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-228ENST00000551132 HSPG2P98160 4391 aa5.3□□□□□ -1.56
CNOT2-228ENST00000551132 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
CNOT2-228ENST00000551132 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
CNOT2-228ENST00000551132 SEC61BP60468 96 aaKnown RBP5.28□□□□□ -1.56
CNOT2-228ENST00000551132 KRTAP17-1Q9BYP8 105 aa5.27□□□□□ -1.57
CNOT2-228ENST00000551132 A0A1B0GU33 70 aa5.25□□□□□ -1.57
CNOT2-228ENST00000551132 A8MU10 97 aa5.25□□□□□ -1.57
CNOT2-228ENST00000551132 H1FX-AS1Q4G0G2 97 aa5.25□□□□□ -1.57
CNOT2-228ENST00000551132 RYR3Q15413 4870 aa5.25□□□□□ -1.57
CNOT2-228ENST00000551132 TNXBP22105 4242 aa5.23□□□□□ -1.57
CNOT2-228ENST00000551132 DMBT1Q9UGM3 2413 aaPredicted RBP5.23□□□□□ -1.57
CNOT2-228ENST00000551132 K7ERS5 55 aa5.22□□□□□ -1.57
CNOT2-228ENST00000551132 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
CNOT2-228ENST00000551132 FAT3Q8TDW7 4589 aa5.2□□□□□ -1.58
CNOT2-228ENST00000551132 A6NN06 94 aa5.2□□□□□ -1.58
CNOT2-228ENST00000551132 KRTAP4-5Q9BYR2 181 aa5.19□□□□□ -1.58
CNOT2-228ENST00000551132 LORP23490 312 aaPredicted RBP5.18□□□□□ -1.58
CNOT2-228ENST00000551132 LRP1Q07954 4544 aaKnown RBP5.17□□□□□ -1.58
CNOT2-228ENST00000551132 KIAA1109Q2LD37 5005 aa5.16□□□□□ -1.58
CNOT2-228ENST00000551132 CSAG1Q6PB30 78 aa5.15□□□□□ -1.59
CNOT2-228ENST00000551132 H0YAA0 97 aa5.12□□□□□ -1.59
CNOT2-228ENST00000551132 EPPK1P58107 5090 aaKnown RBP5.06□□□□□ -1.6
CNOT2-228ENST00000551132 MYCBP2O75592 4640 aa5.05□□□□□ -1.6
CNOT2-228ENST00000551132 ADM2Q7Z4H4 148 aa5.05□□□□□ -1.6
CNOT2-228ENST00000551132 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
CNOT2-228ENST00000551132 M0QZ58 72 aa5□□□□□ -1.61
CNOT2-228ENST00000551132 A0A0D9SG42 100 aa4.98□□□□□ -1.61
CNOT2-228ENST00000551132 P0C880 135 aa4.98□□□□□ -1.61
CNOT2-228ENST00000551132 BIRC6Q9NR09 4857 aa4.95□□□□□ -1.62
CNOT2-228ENST00000551132 R4GN34 69 aa4.93□□□□□ -1.62
CNOT2-228ENST00000551132 PRAC1Q96KF2 57 aa4.91□□□□□ -1.62
CNOT2-228ENST00000551132 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.63
CNOT2-228ENST00000551132 HERC2O95714 4834 aa4.9□□□□□ -1.63
CNOT2-228ENST00000551132 ROMO1P60602 79 aa4.89□□□□□ -1.63
CNOT2-228ENST00000551132 SPINT4Q6UDR6 99 aa4.89□□□□□ -1.63
CNOT2-228ENST00000551132 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
CNOT2-228ENST00000551132 ABCA13Q86UQ4 5058 aa4.87□□□□□ -1.63
CNOT2-228ENST00000551132 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
CNOT2-228ENST00000551132 LRP2P98164 4655 aa4.83□□□□□ -1.64
CNOT2-228ENST00000551132 LINC01554Q52M75 96 aa4.82□□□□□ -1.64
CNOT2-228ENST00000551132 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.8□□□□□ -1.64
CNOT2-228ENST00000551132 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
CNOT2-228ENST00000551132 LPAP08519 4548 aa4.8□□□□□ -1.64
CNOT2-228ENST00000551132 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
CNOT2-228ENST00000551132 CRIPTQ9P021 101 aa4.79□□□□□ -1.64
CNOT2-228ENST00000551132 KRTAP12-2P59991 146 aa4.78□□□□□ -1.64
CNOT2-228ENST00000551132 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
CNOT2-228ENST00000551132 MUC17Q685J3 4493 aa4.77□□□□□ -1.65
CNOT2-228ENST00000551132 KRTAP9-6A0A140TA67 174 aa4.76□□□□□ -1.65
CNOT2-228ENST00000551132 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
CNOT2-228ENST00000551132 M0R2T5 61 aa4.72□□□□□ -1.65
CNOT2-228ENST00000551132 H3BS24 57 aa4.71□□□□□ -1.66
CNOT2-228ENST00000551132 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
CNOT2-228ENST00000551132 HERC1Q15751 4861 aa4.61□□□□□ -1.67
CNOT2-228ENST00000551132 PCLOQ9Y6V0 5065 aa4.61□□□□□ -1.67
CNOT2-228ENST00000551132 KRTAP4-12Q9BQ66 201 aa4.58□□□□□ -1.68
CNOT2-228ENST00000551132 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
CNOT2-228ENST00000551132 MT1HP80294 61 aa4.56□□□□□ -1.68
CNOT2-228ENST00000551132 PLAC4Q8WY50 150 aa4.56□□□□□ -1.68
CNOT2-228ENST00000551132 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
CNOT2-228ENST00000551132 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
CNOT2-228ENST00000551132 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
CNOT2-228ENST00000551132 C10orf95Q9H7T3 257 aa4.55□□□□□ -1.68
CNOT2-228ENST00000551132 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
CNOT2-228ENST00000551132 KRTAP10-10P60014 251 aa4.51□□□□□ -1.69
CNOT2-228ENST00000551132 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
CNOT2-228ENST00000551132 SPRR2GQ9BYE4 73 aa4.49□□□□□ -1.69
CNOT2-228ENST00000551132 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
CNOT2-228ENST00000551132 TNP1P09430 55 aa4.47□□□□□ -1.69
CNOT2-228ENST00000551132 KRTAP19-1Q8IUB9 90 aa4.45□□□□□ -1.7
CNOT2-228ENST00000551132 MT2AP02795 61 aa4.43□□□□□ -1.7
CNOT2-228ENST00000551132 MT1FP04733 61 aa4.4□□□□□ -1.71
CNOT2-228ENST00000551132 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
CNOT2-228ENST00000551132 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
CNOT2-228ENST00000551132 RNF213Q63HN8 5207 aa4.35□□□□□ -1.71
CNOT2-228ENST00000551132 MUC2Q02817 5179 aa4.35□□□□□ -1.71
CNOT2-228ENST00000551132 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
CNOT2-228ENST00000551132 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
CNOT2-228ENST00000551132 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
CNOT2-228ENST00000551132 UBR4Q5T4S7 5183 aa4.28□□□□□ -1.72
CNOT2-228ENST00000551132 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
CNOT2-228ENST00000551132 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
CNOT2-228ENST00000551132 FAT4Q6V0I7 4981 aa4.22□□□□□ -1.73
CNOT2-228ENST00000551132 KRTAP9-3Q9BYQ3 159 aa4.21□□□□□ -1.74
CNOT2-228ENST00000551132 MT1BP07438 61 aa4.2□□□□□ -1.74
CNOT2-228ENST00000551132 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
CNOT2-228ENST00000551132 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
CNOT2-228ENST00000551132 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
CNOT2-228ENST00000551132 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
CNOT2-228ENST00000551132 MT1XP80297 61 aa4.13□□□□□ -1.75
CNOT2-228ENST00000551132 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
CNOT2-228ENST00000551132 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
CNOT2-228ENST00000551132 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
CNOT2-228ENST00000551132 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
CNOT2-228ENST00000551132 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
CNOT2-228ENST00000551132 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
CNOT2-228ENST00000551132 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
CNOT2-228ENST00000551132 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
CNOT2-228ENST00000551132 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
CNOT2-228ENST00000551132 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms