RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 KRTAP10-5P60370 271 aa5.25□□□□□ -1.57
GPN3-208ENST00000550974 CYSTM1Q9H1C7 97 aa5.25□□□□□ -1.57
GPN3-208ENST00000550974 LCE1AQ5T7P2 110 aa5.24□□□□□ -1.57
GPN3-208ENST00000550974 A0A1B0GVX0 72 aa5.23□□□□□ -1.57
GPN3-208ENST00000550974 WFDC13Q8IUB5 93 aa5.22□□□□□ -1.57
GPN3-208ENST00000550974 C8orf17Q9NRJ1 99 aa5.22□□□□□ -1.57
GPN3-208ENST00000550974 CASC2Q6XLA1 102 aa5.21□□□□□ -1.58
GPN3-208ENST00000550974 NDUFB1O75438 58 aa5.2□□□□□ -1.58
GPN3-208ENST00000550974 MT1BP07438 61 aa5.2□□□□□ -1.58
GPN3-208ENST00000550974 KLKP1Q107X0 134 aa5.2□□□□□ -1.58
GPN3-208ENST00000550974 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
GPN3-208ENST00000550974 NOTCH2NLQ7Z3S9 236 aa5.2□□□□□ -1.58
GPN3-208ENST00000550974 C20orf197Q8N268 126 aa5.19□□□□□ -1.58
GPN3-208ENST00000550974 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
GPN3-208ENST00000550974 IGHV6-1A0A0B4J1U7 121 aa5.17□□□□□ -1.58
GPN3-208ENST00000550974 hDV103S1A0JD37 113 aa5.17□□□□□ -1.58
GPN3-208ENST00000550974 TMEM254Q8TBM7 123 aa5.17□□□□□ -1.58
GPN3-208ENST00000550974 C8orf87E5RJ46 101 aa5.16□□□□□ -1.58
GPN3-208ENST00000550974 Q5VV11 94 aa5.16□□□□□ -1.58
GPN3-208ENST00000550974 ZCCHC13Q8WW36 166 aaKnown RBP5.16□□□□□ -1.58
GPN3-208ENST00000550974 H7BZZ5 65 aa5.14□□□□□ -1.59
GPN3-208ENST00000550974 MRPL34Q9BQ48 92 aaKnown RBP5.14□□□□□ -1.59
GPN3-208ENST00000550974 SNURFQ9Y675 71 aa5.14□□□□□ -1.59
GPN3-208ENST00000550974 TMEM258P61165 79 aa5.12□□□□□ -1.59
GPN3-208ENST00000550974 C5orf47Q569G3 176 aa5.11□□□□□ -1.59
GPN3-208ENST00000550974 NDUFC1O43677 76 aa5.09□□□□□ -1.59
GPN3-208ENST00000550974 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.59
GPN3-208ENST00000550974 TP53AIP1Q9HCN2 124 aa5.09□□□□□ -1.59
GPN3-208ENST00000550974 TRAV22A0A0B4J277 110 aa5.08□□□□□ -1.6
GPN3-208ENST00000550974 H0Y9P7 68 aa5.08□□□□□ -1.6
GPN3-208ENST00000550974 H3BPC8 53 aa5.08□□□□□ -1.6
GPN3-208ENST00000550974 LINC00313P59037 77 aa5.08□□□□□ -1.6
GPN3-208ENST00000550974 MP68P56378 58 aa5.05□□□□□ -1.6
GPN3-208ENST00000550974 Q5W150 140 aa5.05□□□□□ -1.6
GPN3-208ENST00000550974 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
GPN3-208ENST00000550974 LINC00208Q96KT6 92 aa5.04□□□□□ -1.6
GPN3-208ENST00000550974 NDUFS5O43920 106 aa5.03□□□□□ -1.6
GPN3-208ENST00000550974 KRTAP19-8Q3LI54 63 aa5.03□□□□□ -1.6
GPN3-208ENST00000550974 ATP5EP56381 51 aaPredicted RBP5.02□□□□□ -1.61
GPN3-208ENST00000550974 C1orf64Q8NEQ6 169 aa5.01□□□□□ -1.61
GPN3-208ENST00000550974 LOC101927531A0A1B0GV80 90 aa4.98□□□□□ -1.61
GPN3-208ENST00000550974 CYP4F30PQ9H0H9 118 aa4.98□□□□□ -1.61
GPN3-208ENST00000550974 SPINK7P58062 85 aa4.97□□□□□ -1.61
GPN3-208ENST00000550974 RPS28P62857 69 aaKnown RBP4.97□□□□□ -1.61
GPN3-208ENST00000550974 SPANXA2-OT1Q8N9U9 137 aa4.97□□□□□ -1.61
GPN3-208ENST00000550974 IGKV2-30P06310 120 aa4.96□□□□□ -1.62
GPN3-208ENST00000550974 SERP1Q9Y6X1 66 aa4.96□□□□□ -1.62
GPN3-208ENST00000550974 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
GPN3-208ENST00000550974 KRTAP5-10Q6L8G5 202 aa4.88□□□□□ -1.63
GPN3-208ENST00000550974 AHNAK2Q8IVF2 5795 aa4.86□□□□□ -1.63
GPN3-208ENST00000550974 H1FX-AS1Q4G0G2 97 aa4.86□□□□□ -1.63
GPN3-208ENST00000550974 C7orf65Q6ZTY9 151 aa4.86□□□□□ -1.63
GPN3-208ENST00000550974 IGKV2D-30A0A075B6S6 120 aa4.85□□□□□ -1.63
GPN3-208ENST00000550974 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
GPN3-208ENST00000550974 DMAC1Q96GE9 116 aa4.84□□□□□ -1.63
GPN3-208ENST00000550974 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
GPN3-208ENST00000550974 SMIM26A0A096LP01 95 aa4.82□□□□□ -1.64
GPN3-208ENST00000550974 COA5Q86WW8 74 aa4.82□□□□□ -1.64
GPN3-208ENST00000550974 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
GPN3-208ENST00000550974 SPRR5A0A1B0GTR4 108 aa4.81□□□□□ -1.64
GPN3-208ENST00000550974 KRTAP4-8A0A0G2JLE6 195 aa4.79□□□□□ -1.64
GPN3-208ENST00000550974 KRTAP5-7Q6L8G8 165 aa4.79□□□□□ -1.64
GPN3-208ENST00000550974 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
GPN3-208ENST00000550974 ACYP2P14621 99 aa4.74□□□□□ -1.65
GPN3-208ENST00000550974 KRTAP3-1Q9BYR8 98 aa4.74□□□□□ -1.65
GPN3-208ENST00000550974 A8MUN3 132 aa4.73□□□□□ -1.65
GPN3-208ENST00000550974 C4orf26Q17RF5 130 aa4.73□□□□□ -1.65
GPN3-208ENST00000550974 Q1T7F1 81 aa4.73□□□□□ -1.65
GPN3-208ENST00000550974 PRO2289Q9P1D8 64 aa4.72□□□□□ -1.65
GPN3-208ENST00000550974 MT4P47944 62 aa4.71□□□□□ -1.66
GPN3-208ENST00000550974 KRTAP12-2P59991 146 aa4.69□□□□□ -1.66
GPN3-208ENST00000550974 MT1XP80297 61 aa4.67□□□□□ -1.66
GPN3-208ENST00000550974 LINC01558Q9Y6Z2 57 aa4.66□□□□□ -1.66
GPN3-208ENST00000550974 V9GYY9 64 aa4.65□□□□□ -1.67
GPN3-208ENST00000550974 CHKB-CPT1BH3BT56 60 aa4.64□□□□□ -1.67
GPN3-208ENST00000550974 PSPHP1O15172 72 aa4.59□□□□□ -1.67
GPN3-208ENST00000550974 KRTAP5-3Q6L8H2 238 aa4.59□□□□□ -1.67
GPN3-208ENST00000550974 LCA10Q71F78 164 aa4.59□□□□□ -1.67
GPN3-208ENST00000550974 PRR15LQ9BU68 103 aa4.59□□□□□ -1.67
GPN3-208ENST00000550974 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
GPN3-208ENST00000550974 CSAG1Q6PB30 78 aa4.56□□□□□ -1.68
GPN3-208ENST00000550974 SPTSSBQ8NFR3 76 aa4.53□□□□□ -1.68
GPN3-208ENST00000550974 CRIPTQ9P021 101 aa4.53□□□□□ -1.68
GPN3-208ENST00000550974 S4R3F8 94 aa4.52□□□□□ -1.69
GPN3-208ENST00000550974 A0A1B0GU69 56 aa4.5□□□□□ -1.69
GPN3-208ENST00000550974 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
GPN3-208ENST00000550974 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
GPN3-208ENST00000550974 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
GPN3-208ENST00000550974 A8MU10 97 aa4.45□□□□□ -1.7
GPN3-208ENST00000550974 LCE5AQ5TCM9 118 aa4.45□□□□□ -1.7
GPN3-208ENST00000550974 BRK1Q8WUW1 75 aa4.45□□□□□ -1.7
GPN3-208ENST00000550974 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
GPN3-208ENST00000550974 A6NED7 52 aa4.43□□□□□ -1.7
GPN3-208ENST00000550974 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
GPN3-208ENST00000550974 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
GPN3-208ENST00000550974 KRTAP10-12P60413 245 aa4.41□□□□□ -1.7
GPN3-208ENST00000550974 SEC61GP60059 68 aa4.4□□□□□ -1.71
GPN3-208ENST00000550974 SPATA8Q6RVD6 105 aa4.39□□□□□ -1.71
GPN3-208ENST00000550974 UQCR11O14957 56 aa4.38□□□□□ -1.71
GPN3-208ENST00000550974 H0YAA0 97 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms