RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 RNF213Q63HN8 5207 aa3.73□□□□□ -1.81
RNF41-208ENST00000550379 H0YAA0 97 aa3.72□□□□□ -1.81
RNF41-208ENST00000550379 S4R3F8 94 aa3.72□□□□□ -1.81
RNF41-208ENST00000550379 CSAG1Q6PB30 78 aa3.71□□□□□ -1.82
RNF41-208ENST00000550379 LCA10Q71F78 164 aa3.71□□□□□ -1.82
RNF41-208ENST00000550379 FAT4Q6V0I7 4981 aa3.7□□□□□ -1.82
RNF41-208ENST00000550379 SPTSSBQ8NFR3 76 aa3.7□□□□□ -1.82
RNF41-208ENST00000550379 RPS28P62857 69 aaKnown RBP3.68□□□□□ -1.82
RNF41-208ENST00000550379 COA5Q86WW8 74 aa3.68□□□□□ -1.82
RNF41-208ENST00000550379 LORP23490 312 aaPredicted RBP3.67□□□□□ -1.82
RNF41-208ENST00000550379 SERP1Q9Y6X1 66 aa3.66□□□□□ -1.82
RNF41-208ENST00000550379 KRTAP10-6P60371 365 aaPredicted RBP3.65□□□□□ -1.83
RNF41-208ENST00000550379 KRTAP9-8Q9BYQ0 159 aa3.64□□□□□ -1.83
RNF41-208ENST00000550379 CHKB-CPT1BH3BT56 60 aa3.63□□□□□ -1.83
RNF41-208ENST00000550379 M0R2T5 61 aa3.62□□□□□ -1.83
RNF41-208ENST00000550379 CRIPTQ9P021 101 aa3.59□□□□□ -1.83
RNF41-208ENST00000550379 MT2AP02795 61 aa3.58□□□□□ -1.84
RNF41-208ENST00000550379 KRTAP3-2Q9BYR7 98 aa3.57□□□□□ -1.84
RNF41-208ENST00000550379 LINC01558Q9Y6Z2 57 aa3.56□□□□□ -1.84
RNF41-208ENST00000550379 SMIM26A0A096LP01 95 aa3.55□□□□□ -1.84
RNF41-208ENST00000550379 V9GYY9 64 aa3.55□□□□□ -1.84
RNF41-208ENST00000550379 MT1FP04733 61 aa3.54□□□□□ -1.84
RNF41-208ENST00000550379 Q1T7F1 81 aa3.54□□□□□ -1.84
RNF41-208ENST00000550379 SPRR2GQ9BYE4 73 aa3.53□□□□□ -1.84
RNF41-208ENST00000550379 KRTAP9-3Q9BYQ3 159 aa3.53□□□□□ -1.84
RNF41-208ENST00000550379 SEC61GP60059 68 aa3.52□□□□□ -1.85
RNF41-208ENST00000550379 M0QZ58 72 aa3.51□□□□□ -1.85
RNF41-208ENST00000550379 KRTAP10-10P60014 251 aa3.51□□□□□ -1.85
RNF41-208ENST00000550379 LCE2DQ5TA82 110 aaPredicted RBP3.51□□□□□ -1.85
RNF41-208ENST00000550379 ADM2Q7Z4H4 148 aa3.51□□□□□ -1.85
RNF41-208ENST00000550379 P0C880 135 aa3.5□□□□□ -1.85
RNF41-208ENST00000550379 Q5VV11 94 aa3.49□□□□□ -1.85
RNF41-208ENST00000550379 PRR15LQ9BU68 103 aa3.49□□□□□ -1.85
RNF41-208ENST00000550379 A0A1B0GU69 56 aa3.48□□□□□ -1.85
RNF41-208ENST00000550379 KRTAP19-1Q8IUB9 90 aa3.48□□□□□ -1.85
RNF41-208ENST00000550379 KRTAP19-8Q3LI54 63 aa3.46□□□□□ -1.86
RNF41-208ENST00000550379 A6NN06 94 aa3.45□□□□□ -1.86
RNF41-208ENST00000550379 KRTAP9-2Q9BYQ4 174 aa3.45□□□□□ -1.86
RNF41-208ENST00000550379 A0A1B0GU33 70 aa3.44□□□□□ -1.86
RNF41-208ENST00000550379 R4GN34 69 aa3.43□□□□□ -1.86
RNF41-208ENST00000550379 KRTAP9-6A0A140TA67 174 aa3.41□□□□□ -1.86
RNF41-208ENST00000550379 LCE2BO14633 110 aa3.4□□□□□ -1.87
RNF41-208ENST00000550379 UQCR11O14957 56 aa3.4□□□□□ -1.87
RNF41-208ENST00000550379 PSPHP1O15172 72 aa3.38□□□□□ -1.87
RNF41-208ENST00000550379 KRTAP13-4Q3LI77 160 aa3.38□□□□□ -1.87
RNF41-208ENST00000550379 MT1BP07438 61 aa3.36□□□□□ -1.87
RNF41-208ENST00000550379 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
RNF41-208ENST00000550379 A6NED7 52 aa3.31□□□□□ -1.88
RNF41-208ENST00000550379 MIR22HGQ0VDD5 57 aa3.3□□□□□ -1.88
RNF41-208ENST00000550379 KRTAP19-6Q3LI70 58 aa3.3□□□□□ -1.88
RNF41-208ENST00000550379 KRTAP12-1P59990 96 aa3.28□□□□□ -1.88
RNF41-208ENST00000550379 PLAC4Q8WY50 150 aa3.28□□□□□ -1.88
RNF41-208ENST00000550379 CDC42SE1Q9NRR8 79 aa3.28□□□□□ -1.88
RNF41-208ENST00000550379 LINC01554Q52M75 96 aa3.25□□□□□ -1.89
RNF41-208ENST00000550379 BRK1Q8WUW1 75 aa3.25□□□□□ -1.89
RNF41-208ENST00000550379 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
RNF41-208ENST00000550379 A8MU10 97 aa3.23□□□□□ -1.89
RNF41-208ENST00000550379 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
RNF41-208ENST00000550379 A0A0D9SG42 100 aa3.22□□□□□ -1.89
RNF41-208ENST00000550379 KRTAP12-2P59991 146 aa3.22□□□□□ -1.89
RNF41-208ENST00000550379 CRCT1Q9UGL9 99 aa3.22□□□□□ -1.89
RNF41-208ENST00000550379 MT1XP80297 61 aa3.21□□□□□ -1.9
RNF41-208ENST00000550379 K7ERS5 55 aa3.2□□□□□ -1.9
RNF41-208ENST00000550379 USH2AO75445 5202 aa3.18□□□□□ -1.9
RNF41-208ENST00000550379 SPINT4Q6UDR6 99 aa3.17□□□□□ -1.9
RNF41-208ENST00000550379 PRO0628Q9UI54 55 aa3.17□□□□□ -1.9
RNF41-208ENST00000550379 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
RNF41-208ENST00000550379 FSIP2Q5CZC0 6907 aa3.13□□□□□ -1.91
RNF41-208ENST00000550379 SSPOA2VEC9 5147 aa3.12□□□□□ -1.91
RNF41-208ENST00000550379 KRTAP10-12P60413 245 aa3.1□□□□□ -1.91
RNF41-208ENST00000550379 C10orf95Q9H7T3 257 aa3.1□□□□□ -1.91
RNF41-208ENST00000550379 PMAIP1Q13794 54 aa3.08□□□□□ -1.92
RNF41-208ENST00000550379 KRTAP23-1A1A580 65 aa3.07□□□□□ -1.92
RNF41-208ENST00000550379 KRTAP25-1Q3LHN0 102 aa3.07□□□□□ -1.92
RNF41-208ENST00000550379 TNP1P09430 55 aa3.06□□□□□ -1.92
RNF41-208ENST00000550379 FCGBPQ9Y6R7 5405 aaPredicted RBP3.05□□□□□ -1.92
RNF41-208ENST00000550379 KRTAP9-7A8MTY7 169 aa3.04□□□□□ -1.92
RNF41-208ENST00000550379 ROMO1P60602 79 aa3.04□□□□□ -1.92
RNF41-208ENST00000550379 KRTAP10-7P60409 375 aaPredicted RBP3.02□□□□□ -1.93
RNF41-208ENST00000550379 SVIPQ8NHG7 77 aa3.02□□□□□ -1.93
RNF41-208ENST00000550379 KRTAP9-1A8MXZ3 250 aaPredicted RBP3□□□□□ -1.93
RNF41-208ENST00000550379 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
RNF41-208ENST00000550379 PP632Q6XCG6 107 aa2.96□□□□□ -1.94
RNF41-208ENST00000550379 KRTAP8-1Q8IUC2 63 aa2.95□□□□□ -1.94
RNF41-208ENST00000550379 KRTAP6-3Q3LI67 103 aa2.94□□□□□ -1.94
RNF41-208ENST00000550379 KTN1-AS1Q86SY8 53 aa2.94□□□□□ -1.94
RNF41-208ENST00000550379 KRTAP4-8A0A0G2JLE6 195 aa2.93□□□□□ -1.94
RNF41-208ENST00000550379 KRTAP4-8Q9BYQ9 185 aa2.93□□□□□ -1.94
RNF41-208ENST00000550379 KRTAP19-4Q3LI73 84 aa2.9□□□□□ -1.95
RNF41-208ENST00000550379 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
RNF41-208ENST00000550379 KRTAP19-7Q3SYF9 63 aa2.88□□□□□ -1.95
RNF41-208ENST00000550379 MACF1Q9UPN3 7388 aaKnown RBP2.88□□□□□ -1.95
RNF41-208ENST00000550379 MT1EP04732 61 aa2.83□□□□□ -1.96
RNF41-208ENST00000550379 KRTAP12-3P60328 96 aa2.83□□□□□ -1.96
RNF41-208ENST00000550379 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
RNF41-208ENST00000550379 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
RNF41-208ENST00000550379 LCE1AQ5T7P2 110 aa2.8□□□□□ -1.96
RNF41-208ENST00000550379 SPRR2FQ96RM1 72 aa2.8□□□□□ -1.96
RNF41-208ENST00000550379 KMT2DO14686 5537 aa2.78□□□□□ -1.96
RNF41-208ENST00000550379 MT1GP13640 62 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms