RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, human

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE1B-206	ENST00000550285	RPL37	P61927	97 aa	Known RBP	7.74	□□□□□ -1.17
PDE1B-206	ENST00000550285	COA5	Q86WW8	74 aa		7.74	□□□□□ -1.17
PDE1B-206	ENST00000550285	IGKV2D-30	A0A075B6S6	120 aa		7.74	□□□□□ -1.17
PDE1B-206	ENST00000550285	IGKV2-30	P06310	120 aa		7.74	□□□□□ -1.17
PDE1B-206	ENST00000550285	HMCN2	Q8NDA2	5059 aa		7.69	□□□□□ -1.18
PDE1B-206	ENST00000550285	HRES1	P13985	223 aa		7.64	□□□□□ -1.19
PDE1B-206	ENST00000550285	SPINK7	P58062	85 aa		7.64	□□□□□ -1.19
PDE1B-206	ENST00000550285		H3BS24	57 aa		7.6	□□□□□ -1.19
PDE1B-206	ENST00000550285	LINC01554	Q52M75	96 aa		7.6	□□□□□ -1.19
PDE1B-206	ENST00000550285	DMAC1	Q96GE9	116 aa		7.53	□□□□□ -1.2
PDE1B-206	ENST00000550285	ACYP2	P14621	99 aa		7.52	□□□□□ -1.2
PDE1B-206	ENST00000550285	PRAC1	Q96KF2	57 aa		7.5	□□□□□ -1.21
PDE1B-206	ENST00000550285	MUC17	Q685J3	4493 aa		7.49	□□□□□ -1.21
PDE1B-206	ENST00000550285	SEC61B	P60468	96 aa	Known RBP	7.48	□□□□□ -1.21
PDE1B-206	ENST00000550285	KRTAP4-1	Q9BYQ7	146 aa		7.48	□□□□□ -1.21
PDE1B-206	ENST00000550285	KRTAP3-1	Q9BYR8	98 aa		7.47	□□□□□ -1.21
PDE1B-206	ENST00000550285	MUC2	Q02817	5179 aa		7.44	□□□□□ -1.22
PDE1B-206	ENST00000550285	ADM2	Q7Z4H4	148 aa		7.42	□□□□□ -1.22
PDE1B-206	ENST00000550285	SPATA8	Q6RVD6	105 aa		7.41	□□□□□ -1.22
PDE1B-206	ENST00000550285	COX6B2	Q6YFQ2	88 aa		7.4	□□□□□ -1.22
PDE1B-206	ENST00000550285	UBR4	Q5T4S7	5183 aa		7.39	□□□□□ -1.23
PDE1B-206	ENST00000550285	RNF213	Q63HN8	5207 aa		7.33	□□□□□ -1.24
PDE1B-206	ENST00000550285		A0A1B0GU69	56 aa		7.28	□□□□□ -1.24
PDE1B-206	ENST00000550285	UQCR11	O14957	56 aa		7.28	□□□□□ -1.24
PDE1B-206	ENST00000550285	MIR22HG	Q0VDD5	57 aa		7.27	□□□□□ -1.25
PDE1B-206	ENST00000550285	CSAG1	Q6PB30	78 aa		7.27	□□□□□ -1.25
PDE1B-206	ENST00000550285	KRTAP19-2	Q3LHN2	52 aa		7.24	□□□□□ -1.25
PDE1B-206	ENST00000550285	H1FX-AS1	Q4G0G2	97 aa		7.23	□□□□□ -1.25
PDE1B-206	ENST00000550285	KRTAP3-3	Q9BYR6	98 aa		7.2	□□□□□ -1.26
PDE1B-206	ENST00000550285		S4R3F8	94 aa		7.18	□□□□□ -1.26
PDE1B-206	ENST00000550285	FAT4	Q6V0I7	4981 aa		7.13	□□□□□ -1.27
PDE1B-206	ENST00000550285	ROMO1	P60602	79 aa		7.11	□□□□□ -1.27
PDE1B-206	ENST00000550285	FLG	P20930	4061 aa	Predicted RBP	7.08	□□□□□ -1.28
PDE1B-206	ENST00000550285	LCE2C	Q5TA81	110 aa		7.08	□□□□□ -1.28
PDE1B-206	ENST00000550285	KRTAP25-1	Q3LHN0	102 aa		7.07	□□□□□ -1.28
PDE1B-206	ENST00000550285	KRTAP3-2	Q9BYR7	98 aa		6.93	□□□□□ -1.3
PDE1B-206	ENST00000550285	MT1H	P80294	61 aa		6.92	□□□□□ -1.3
PDE1B-206	ENST00000550285	KRTAP10-6	P60371	365 aa	Predicted RBP	6.91	□□□□□ -1.3
PDE1B-206	ENST00000550285		A0A1B0GU33	70 aa		6.9	□□□□□ -1.3
PDE1B-206	ENST00000550285		P0C880	135 aa		6.89	□□□□□ -1.31
PDE1B-206	ENST00000550285		H0YAA0	97 aa		6.89	□□□□□ -1.31
PDE1B-206	ENST00000550285		M0R2T5	61 aa		6.83	□□□□□ -1.32
PDE1B-206	ENST00000550285	LOR	P23490	312 aa	Predicted RBP	6.77	□□□□□ -1.33
PDE1B-206	ENST00000550285	KRTAP13-4	Q3LI77	160 aa		6.76	□□□□□ -1.33
PDE1B-206	ENST00000550285		K7ERS5	55 aa		6.73	□□□□□ -1.33
PDE1B-206	ENST00000550285	KRTAP9-8	Q9BYQ0	159 aa		6.67	□□□□□ -1.34
PDE1B-206	ENST00000550285	LCE2A	Q5TA79	106 aa	Predicted RBP	6.65	□□□□□ -1.34
PDE1B-206	ENST00000550285	MT2A	P02795	61 aa		6.64	□□□□□ -1.35
PDE1B-206	ENST00000550285		M0QZ58	72 aa		6.63	□□□□□ -1.35
PDE1B-206	ENST00000550285		A0A0D9SG42	100 aa		6.62	□□□□□ -1.35
PDE1B-206	ENST00000550285	MT1F	P04733	61 aa		6.62	□□□□□ -1.35
PDE1B-206	ENST00000550285		R4GN34	69 aa		6.61	□□□□□ -1.35
PDE1B-206	ENST00000550285	SPINT4	Q6UDR6	99 aa		6.61	□□□□□ -1.35
PDE1B-206	ENST00000550285	CRIPT	Q9P021	101 aa		6.6	□□□□□ -1.35
PDE1B-206	ENST00000550285	KRTAP15-1	Q3LI76	137 aa		6.59	□□□□□ -1.35
PDE1B-206	ENST00000550285	KRTAP10-10	P60014	251 aa		6.57	□□□□□ -1.36
PDE1B-206	ENST00000550285	NDUFAF8	A1L188	74 aa		6.56	□□□□□ -1.36
PDE1B-206	ENST00000550285		A0A0A0MQY5	61 aa		6.53	□□□□□ -1.36
PDE1B-206	ENST00000550285	KRTAP19-1	Q8IUB9	90 aa		6.49	□□□□□ -1.37
PDE1B-206	ENST00000550285	KRTAP12-2	P59991	146 aa		6.46	□□□□□ -1.37
PDE1B-206	ENST00000550285	KRTAP12-1	P59990	96 aa		6.45	□□□□□ -1.38
PDE1B-206	ENST00000550285	SPRR2G	Q9BYE4	73 aa		6.45	□□□□□ -1.38
PDE1B-206	ENST00000550285	KRTAP9-3	Q9BYQ3	159 aa		6.42	□□□□□ -1.38
PDE1B-206	ENST00000550285	C10orf95	Q9H7T3	257 aa		6.33	□□□□□ -1.4
PDE1B-206	ENST00000550285	LCE2B	O14633	110 aa		6.28	□□□□□ -1.4
PDE1B-206	ENST00000550285	KRTAP19-8	Q3LI54	63 aa		6.28	□□□□□ -1.4
PDE1B-206	ENST00000550285	MT1B	P07438	61 aa		6.25	□□□□□ -1.41
PDE1B-206	ENST00000550285	LUZP6	Q538Z0	58 aa		6.23	□□□□□ -1.41
PDE1B-206	ENST00000550285	USH2A	O75445	5202 aa		6.22	□□□□□ -1.41
PDE1B-206	ENST00000550285	PLAC4	Q8WY50	150 aa		6.21	□□□□□ -1.42
PDE1B-206	ENST00000550285	CAMK2N1	Q7Z7J9	78 aa		6.19	□□□□□ -1.42
PDE1B-206	ENST00000550285	FSIP2	Q5CZC0	6907 aa		6.09	□□□□□ -1.43
PDE1B-206	ENST00000550285	MT1X	P80297	61 aa		6.05	□□□□□ -1.44
PDE1B-206	ENST00000550285	KRTAP10-5	P60370	271 aa		6.03	□□□□□ -1.44
PDE1B-206	ENST00000550285	SSPO	A2VEC9	5147 aa		6.03	□□□□□ -1.44
PDE1B-206	ENST00000550285	LCE2D	Q5TA82	110 aa	Predicted RBP	5.99	□□□□□ -1.45
PDE1B-206	ENST00000550285	PRO2289	Q9P1D8	64 aa		5.87	□□□□□ -1.47
PDE1B-206	ENST00000550285	TNP1	P09430	55 aa		5.86	□□□□□ -1.47
PDE1B-206	ENST00000550285	KRTAP9-2	Q9BYQ4	174 aa		5.84	□□□□□ -1.47
PDE1B-206	ENST00000550285	KRTAP10-7	P60409	375 aa	Predicted RBP	5.83	□□□□□ -1.48
PDE1B-206	ENST00000550285	KRTAP19-6	Q3LI70	58 aa		5.83	□□□□□ -1.48
PDE1B-206	ENST00000550285	PP632	Q6XCG6	107 aa		5.82	□□□□□ -1.48
PDE1B-206	ENST00000550285	KMT2D	O14686	5537 aa		5.76	□□□□□ -1.49
PDE1B-206	ENST00000550285	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.76	□□□□□ -1.49
PDE1B-206	ENST00000550285	KRTAP23-1	A1A580	65 aa		5.73	□□□□□ -1.49
PDE1B-206	ENST00000550285	LCE3A	Q5TA76	89 aa		5.7	□□□□□ -1.5
PDE1B-206	ENST00000550285	KRTAP10-12	P60413	245 aa		5.69	□□□□□ -1.5
PDE1B-206	ENST00000550285	KRTAP4-8	A0A0G2JLE6	195 aa		5.65	□□□□□ -1.5
PDE1B-206	ENST00000550285	KRTAP4-8	Q9BYQ9	185 aa		5.65	□□□□□ -1.5
PDE1B-206	ENST00000550285	CRCT1	Q9UGL9	99 aa		5.61	□□□□□ -1.51
PDE1B-206	ENST00000550285	SPRR5	A0A1B0GTR4	108 aa		5.59	□□□□□ -1.52
PDE1B-206	ENST00000550285	KRTAP8-1	Q8IUC2	63 aa		5.52	□□□□□ -1.53
PDE1B-206	ENST00000550285	MACF1	Q9UPN3	7388 aa	Known RBP	5.49	□□□□□ -1.53
PDE1B-206	ENST00000550285	KRTAP19-5	Q3LI72	72 aa		5.47	□□□□□ -1.53
PDE1B-206	ENST00000550285	KRTAP12-3	P60328	96 aa		5.44	□□□□□ -1.54
PDE1B-206	ENST00000550285	INE1	O15225	51 aa		5.41	□□□□□ -1.54
PDE1B-206	ENST00000550285	KRTAP19-7	Q3SYF9	63 aa		5.4	□□□□□ -1.55
PDE1B-206	ENST00000550285	SYNE2	Q8WXH0	6885 aa	Known RBP	5.4	□□□□□ -1.55
PDE1B-206	ENST00000550285	KRTAP9-6	A0A140TA67	174 aa		5.36	□□□□□ -1.55
PDE1B-206	ENST00000550285	MUC12	Q9UKN1	5478 aa		5.32	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms