RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 CRCT1Q9UGL9 99 aa10.55□□□□□ -0.72
BRF1-216ENST00000550208 FSIP2Q5CZC0 6907 aa10.52□□□□□ -0.73
BRF1-216ENST00000550208 A8MUN3 132 aa10.5□□□□□ -0.73
BRF1-216ENST00000550208 LCE2BO14633 110 aa10.5□□□□□ -0.73
BRF1-216ENST00000550208 USH2AO75445 5202 aa10.48□□□□□ -0.73
BRF1-216ENST00000550208 SERP2Q8N6R1 65 aa10.44□□□□□ -0.74
BRF1-216ENST00000550208 NDUFC1O43677 76 aa10.4□□□□□ -0.74
BRF1-216ENST00000550208 SNURFQ9Y675 71 aa10.37□□□□□ -0.75
BRF1-216ENST00000550208 DMAC1Q96GE9 116 aa10.35□□□□□ -0.75
BRF1-216ENST00000550208 C20orf197Q8N268 126 aa10.33□□□□□ -0.76
BRF1-216ENST00000550208 SSPOA2VEC9 5147 aa10.3□□□□□ -0.76
BRF1-216ENST00000550208 COX7CP15954 63 aa10.26□□□□□ -0.77
BRF1-216ENST00000550208 KRTAP19-1Q8IUB9 90 aa10.23□□□□□ -0.77
BRF1-216ENST00000550208 ACYP2P14621 99 aa10.2□□□□□ -0.78
BRF1-216ENST00000550208 H0YAA0 97 aa10.18□□□□□ -0.78
BRF1-216ENST00000550208 ANAPC13Q9BS18 74 aa10.16□□□□□ -0.78
BRF1-216ENST00000550208 ADM2Q7Z4H4 148 aa10.14□□□□□ -0.79
BRF1-216ENST00000550208 SPRR2GQ9BYE4 73 aa10.13□□□□□ -0.79
BRF1-216ENST00000550208 SPANXA2-OT1Q8N9U9 137 aa10.12□□□□□ -0.79
BRF1-216ENST00000550208 CYSTM1Q9H1C7 97 aa10.12□□□□□ -0.79
BRF1-216ENST00000550208 CRIPTQ9P021 101 aa10.08□□□□□ -0.8
BRF1-216ENST00000550208 KRTAP19-8Q3LI54 63 aa10.03□□□□□ -0.8
BRF1-216ENST00000550208 KRTAP19-6Q3LI70 58 aa10.03□□□□□ -0.8
BRF1-216ENST00000550208 H7BZZ5 65 aa10.02□□□□□ -0.81
BRF1-216ENST00000550208 CHKB-CPT1BH3BT56 60 aa10□□□□□ -0.81
BRF1-216ENST00000550208 CCDC179H3BU77 68 aa10□□□□□ -0.81
BRF1-216ENST00000550208 MT1BP07438 61 aa9.99□□□□□ -0.81
BRF1-216ENST00000550208 FCGBPQ9Y6R7 5405 aaPredicted RBP9.99□□□□□ -0.81
BRF1-216ENST00000550208 Q5VV11 94 aa9.98□□□□□ -0.81
BRF1-216ENST00000550208 P0C880 135 aa9.97□□□□□ -0.81
BRF1-216ENST00000550208 SPTSSBQ8NFR3 76 aa9.96□□□□□ -0.82
BRF1-216ENST00000550208 KRTAP3-2Q9BYR7 98 aa9.96□□□□□ -0.82
BRF1-216ENST00000550208 COA5Q86WW8 74 aa9.83□□□□□ -0.84
BRF1-216ENST00000550208 R4GN34 69 aa9.81□□□□□ -0.84
BRF1-216ENST00000550208 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.8□□□□□ -0.84
BRF1-216ENST00000550208 M0QZ58 72 aa9.77□□□□□ -0.85
BRF1-216ENST00000550208 A6NN06 94 aa9.71□□□□□ -0.86
BRF1-216ENST00000550208 KRTAP10-5P60370 271 aa9.67□□□□□ -0.86
BRF1-216ENST00000550208 ATP5EP56381 51 aaPredicted RBP9.62□□□□□ -0.87
BRF1-216ENST00000550208 LINC01554Q52M75 96 aa9.62□□□□□ -0.87
BRF1-216ENST00000550208 KRTAP9-7A8MTY7 169 aa9.61□□□□□ -0.87
BRF1-216ENST00000550208 PLAC4Q8WY50 150 aa9.61□□□□□ -0.87
BRF1-216ENST00000550208 TMEM258P61165 79 aa9.58□□□□□ -0.88
BRF1-216ENST00000550208 SEC61GP60059 68 aa9.49□□□□□ -0.89
BRF1-216ENST00000550208 SERP1Q9Y6X1 66 aa9.48□□□□□ -0.89
BRF1-216ENST00000550208 MACF1Q9UPN3 7388 aaKnown RBP9.47□□□□□ -0.89
BRF1-216ENST00000550208 KRTAP13-4Q3LI77 160 aa9.47□□□□□ -0.89
BRF1-216ENST00000550208 MT1XP80297 61 aa9.45□□□□□ -0.9
BRF1-216ENST00000550208 PRO2289Q9P1D8 64 aa9.4□□□□□ -0.9
BRF1-216ENST00000550208 PCP4P48539 62 aa9.38□□□□□ -0.91
BRF1-216ENST00000550208 SYNE2Q8WXH0 6885 aaKnown RBP9.34□□□□□ -0.91
BRF1-216ENST00000550208 A0A1B0GU33 70 aa9.33□□□□□ -0.92
BRF1-216ENST00000550208 A0A1B0GU69 56 aa9.3□□□□□ -0.92
BRF1-216ENST00000550208 KRTAP6-3Q3LI67 103 aa9.29□□□□□ -0.92
BRF1-216ENST00000550208 SPATA8Q6RVD6 105 aa9.28□□□□□ -0.92
BRF1-216ENST00000550208 A0A0D9SG42 100 aa9.21□□□□□ -0.94
BRF1-216ENST00000550208 LINC01558Q9Y6Z2 57 aa9.21□□□□□ -0.94
BRF1-216ENST00000550208 KRTAP12-2P59991 146 aa9.11□□□□□ -0.95
BRF1-216ENST00000550208 PRR15LQ9BU68 103 aa9.1□□□□□ -0.95
BRF1-216ENST00000550208 CAMK2N1Q7Z7J9 78 aa9.09□□□□□ -0.95
BRF1-216ENST00000550208 SPINT4Q6UDR6 99 aa9.06□□□□□ -0.96
BRF1-216ENST00000550208 KRTAP10-7P60409 375 aaPredicted RBP9.04□□□□□ -0.96
BRF1-216ENST00000550208 SMIM26A0A096LP01 95 aa9.03□□□□□ -0.96
BRF1-216ENST00000550208 KRTAP12-1P59990 96 aa9.03□□□□□ -0.96
BRF1-216ENST00000550208 KMT2DO14686 5537 aa9.02□□□□□ -0.96
BRF1-216ENST00000550208 A8MU10 97 aa9.02□□□□□ -0.97
BRF1-216ENST00000550208 KRTAP5-9P26371 169 aa9□□□□□ -0.97
BRF1-216ENST00000550208 KRTAP4-8A0A0G2JLE6 195 aa8.97□□□□□ -0.97
BRF1-216ENST00000550208 KRTAP10-12P60413 245 aa8.97□□□□□ -0.97
BRF1-216ENST00000550208 KRTAP4-8Q9BYQ9 185 aa8.97□□□□□ -0.97
BRF1-216ENST00000550208 Q1T7F1 81 aa8.95□□□□□ -0.98
BRF1-216ENST00000550208 RPS28P62857 69 aaKnown RBP8.93□□□□□ -0.98
BRF1-216ENST00000550208 KRTAP8-1Q8IUC2 63 aa8.93□□□□□ -0.98
BRF1-216ENST00000550208 V9GYY9 64 aa8.92□□□□□ -0.98
BRF1-216ENST00000550208 MUC12Q9UKN1 5478 aa8.88□□□□□ -0.99
BRF1-216ENST00000550208 PSPHP1O15172 72 aa8.86□□□□□ -0.99
BRF1-216ENST00000550208 UQCR11O14957 56 aa8.84□□□□□ -0.99
BRF1-216ENST00000550208 SPRR2FQ96RM1 72 aa8.84□□□□□ -0.99
BRF1-216ENST00000550208 NEBP20929 6669 aa8.76□□□□□ -1.01
BRF1-216ENST00000550208 MIR22HGQ0VDD5 57 aa8.71□□□□□ -1.02
BRF1-216ENST00000550208 MDN1Q9NU22 5596 aa8.69□□□□□ -1.02
BRF1-216ENST00000550208 C10orf95Q9H7T3 257 aa8.63□□□□□ -1.03
BRF1-216ENST00000550208 SPRR2EP22531 72 aa8.62□□□□□ -1.03
BRF1-216ENST00000550208 SPRR2BP35325 72 aa8.62□□□□□ -1.03
BRF1-216ENST00000550208 SPRR2AP35326 72 aa8.62□□□□□ -1.03
BRF1-216ENST00000550208 LCE1AQ5T7P2 110 aa8.57□□□□□ -1.04
BRF1-216ENST00000550208 A6NED7 52 aa8.55□□□□□ -1.04
BRF1-216ENST00000550208 TNP1P09430 55 aa8.48□□□□□ -1.05
BRF1-216ENST00000550208 KRTAP19-7Q3SYF9 63 aa8.45□□□□□ -1.06
BRF1-216ENST00000550208 KRTAP20-1Q3LI63 56 aa8.42□□□□□ -1.06
BRF1-216ENST00000550208 K7ERS5 55 aa8.41□□□□□ -1.06
BRF1-216ENST00000550208 MT1EP04732 61 aa8.35□□□□□ -1.07
BRF1-216ENST00000550208 KRTAP19-5Q3LI72 72 aa8.35□□□□□ -1.07
BRF1-216ENST00000550208 SPRR2DP22532 72 aa8.33□□□□□ -1.08
BRF1-216ENST00000550208 LCE3AQ5TA76 89 aa8.33□□□□□ -1.08
BRF1-216ENST00000550208 KRTAP2-3P0C7H8 128 aa8.32□□□□□ -1.08
BRF1-216ENST00000550208 KRTAP2-4Q9BYR9 128 aa8.32□□□□□ -1.08
BRF1-216ENST00000550208 CDC42SE1Q9NRR8 79 aa8.3□□□□□ -1.08
BRF1-216ENST00000550208 KRTAP19-3Q7Z4W3 81 aa8.19□□□□□ -1.1
BRF1-216ENST00000550208 KRTAP25-1Q3LHN0 102 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms