RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 IGKV2-30P06310 120 aa5.07□□□□□ -1.6
SMARCD1-206ENST00000549274 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
SMARCD1-206ENST00000549274 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.6
SMARCD1-206ENST00000549274 C1orf64Q8NEQ6 169 aa5.03□□□□□ -1.6
SMARCD1-206ENST00000549274 KRTAP4-1Q9BYQ7 146 aa5.03□□□□□ -1.6
SMARCD1-206ENST00000549274 FAM236DA0A1B0GTK5 79 aa5.02□□□□□ -1.61
SMARCD1-206ENST00000549274 FAM236CP0DP71 79 aa5.02□□□□□ -1.61
SMARCD1-206ENST00000549274 SERP2Q8N6R1 65 aa5.02□□□□□ -1.61
SMARCD1-206ENST00000549274 LINC00208Q96KT6 92 aa5.02□□□□□ -1.61
SMARCD1-206ENST00000549274 KRTAP9-3Q9BYQ3 159 aa5.02□□□□□ -1.61
SMARCD1-206ENST00000549274 HRES1P13985 223 aa5.01□□□□□ -1.61
SMARCD1-206ENST00000549274 CYP4F30PQ9H0H9 118 aa5.01□□□□□ -1.61
SMARCD1-206ENST00000549274 V9GYY9 64 aa5.01□□□□□ -1.61
SMARCD1-206ENST00000549274 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
SMARCD1-206ENST00000549274 MUC2Q02817 5179 aa4.98□□□□□ -1.61
SMARCD1-206ENST00000549274 COX7CP15954 63 aa4.95□□□□□ -1.62
SMARCD1-206ENST00000549274 ANAPC13Q9BS18 74 aa4.95□□□□□ -1.62
SMARCD1-206ENST00000549274 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
SMARCD1-206ENST00000549274 A8MUN3 132 aa4.93□□□□□ -1.62
SMARCD1-206ENST00000549274 NDUFC1O43677 76 aa4.92□□□□□ -1.62
SMARCD1-206ENST00000549274 C4orf26Q17RF5 130 aa4.92□□□□□ -1.62
SMARCD1-206ENST00000549274 C20orf197Q8N268 126 aa4.92□□□□□ -1.62
SMARCD1-206ENST00000549274 KLKP1Q107X0 134 aa4.91□□□□□ -1.62
SMARCD1-206ENST00000549274 H1FX-AS1Q4G0G2 97 aa4.91□□□□□ -1.62
SMARCD1-206ENST00000549274 KRTAP19-2Q3LHN2 52 aa4.9□□□□□ -1.63
SMARCD1-206ENST00000549274 FAT4Q6V0I7 4981 aa4.9□□□□□ -1.63
SMARCD1-206ENST00000549274 SPANXA2-OT1Q8N9U9 137 aa4.87□□□□□ -1.63
SMARCD1-206ENST00000549274 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
SMARCD1-206ENST00000549274 M0R2T5 61 aa4.85□□□□□ -1.63
SMARCD1-206ENST00000549274 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
SMARCD1-206ENST00000549274 MT1HP80294 61 aa4.83□□□□□ -1.64
SMARCD1-206ENST00000549274 DMAC1Q96GE9 116 aa4.83□□□□□ -1.64
SMARCD1-206ENST00000549274 S4R3F8 94 aa4.83□□□□□ -1.64
SMARCD1-206ENST00000549274 ACYP2P14621 99 aa4.82□□□□□ -1.64
SMARCD1-206ENST00000549274 ATP5EP56381 51 aaPredicted RBP4.78□□□□□ -1.64
SMARCD1-206ENST00000549274 H7BZZ5 65 aa4.77□□□□□ -1.65
SMARCD1-206ENST00000549274 CSAG1Q6PB30 78 aa4.77□□□□□ -1.65
SMARCD1-206ENST00000549274 SPTSSBQ8NFR3 76 aa4.77□□□□□ -1.65
SMARCD1-206ENST00000549274 CCDC179H3BU77 68 aa4.75□□□□□ -1.65
SMARCD1-206ENST00000549274 CHKB-CPT1BH3BT56 60 aa4.74□□□□□ -1.65
SMARCD1-206ENST00000549274 LCA10Q71F78 164 aa4.74□□□□□ -1.65
SMARCD1-206ENST00000549274 TMEM258P61165 79 aa4.71□□□□□ -1.66
SMARCD1-206ENST00000549274 KRTAP10-6P60371 365 aaPredicted RBP4.7□□□□□ -1.66
SMARCD1-206ENST00000549274 CYSTM1Q9H1C7 97 aa4.68□□□□□ -1.66
SMARCD1-206ENST00000549274 COA5Q86WW8 74 aa4.66□□□□□ -1.66
SMARCD1-206ENST00000549274 H0YAA0 97 aa4.65□□□□□ -1.67
SMARCD1-206ENST00000549274 KRTAP10-10P60014 251 aa4.59□□□□□ -1.67
SMARCD1-206ENST00000549274 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
SMARCD1-206ENST00000549274 MT2AP02795 61 aa4.57□□□□□ -1.68
SMARCD1-206ENST00000549274 CRIPTQ9P021 101 aa4.57□□□□□ -1.68
SMARCD1-206ENST00000549274 SERP1Q9Y6X1 66 aa4.55□□□□□ -1.68
SMARCD1-206ENST00000549274 ADM2Q7Z4H4 148 aa4.54□□□□□ -1.68
SMARCD1-206ENST00000549274 MT1FP04733 61 aa4.52□□□□□ -1.69
SMARCD1-206ENST00000549274 PSPHP1O15172 72 aa4.51□□□□□ -1.69
SMARCD1-206ENST00000549274 PRR15LQ9BU68 103 aa4.49□□□□□ -1.69
SMARCD1-206ENST00000549274 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
SMARCD1-206ENST00000549274 A0A1B0GU69 56 aa4.46□□□□□ -1.7
SMARCD1-206ENST00000549274 R4GN34 69 aa4.46□□□□□ -1.7
SMARCD1-206ENST00000549274 SMIM26A0A096LP01 95 aa4.45□□□□□ -1.7
SMARCD1-206ENST00000549274 M0QZ58 72 aa4.44□□□□□ -1.7
SMARCD1-206ENST00000549274 RPS28P62857 69 aaKnown RBP4.44□□□□□ -1.7
SMARCD1-206ENST00000549274 P0C880 135 aa4.43□□□□□ -1.7
SMARCD1-206ENST00000549274 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
SMARCD1-206ENST00000549274 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
SMARCD1-206ENST00000549274 Q5VV11 94 aa4.38□□□□□ -1.71
SMARCD1-206ENST00000549274 A0A1B0GU33 70 aa4.37□□□□□ -1.71
SMARCD1-206ENST00000549274 Q1T7F1 81 aa4.36□□□□□ -1.71
SMARCD1-206ENST00000549274 KRTAP19-8Q3LI54 63 aa4.34□□□□□ -1.71
SMARCD1-206ENST00000549274 CAMK2N1Q7Z7J9 78 aa4.34□□□□□ -1.71
SMARCD1-206ENST00000549274 A6NN06 94 aa4.31□□□□□ -1.72
SMARCD1-206ENST00000549274 PMAIP1Q13794 54 aa4.31□□□□□ -1.72
SMARCD1-206ENST00000549274 UQCR11O14957 56 aa4.3□□□□□ -1.72
SMARCD1-206ENST00000549274 PLAC4Q8WY50 150 aa4.3□□□□□ -1.72
SMARCD1-206ENST00000549274 LINC01554Q52M75 96 aa4.29□□□□□ -1.72
SMARCD1-206ENST00000549274 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
SMARCD1-206ENST00000549274 MT1BP07438 61 aa4.24□□□□□ -1.73
SMARCD1-206ENST00000549274 CRCT1Q9UGL9 99 aa4.24□□□□□ -1.73
SMARCD1-206ENST00000549274 USH2AO75445 5202 aa4.23□□□□□ -1.73
SMARCD1-206ENST00000549274 KRTAP13-4Q3LI77 160 aa4.23□□□□□ -1.73
SMARCD1-206ENST00000549274 SPATA8Q6RVD6 105 aa4.22□□□□□ -1.73
SMARCD1-206ENST00000549274 PRO2289Q9P1D8 64 aa4.21□□□□□ -1.74
SMARCD1-206ENST00000549274 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
SMARCD1-206ENST00000549274 A0A0D9SG42 100 aa4.19□□□□□ -1.74
SMARCD1-206ENST00000549274 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
SMARCD1-206ENST00000549274 A6NED7 52 aa4.18□□□□□ -1.74
SMARCD1-206ENST00000549274 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
SMARCD1-206ENST00000549274 K7ERS5 55 aa4.16□□□□□ -1.74
SMARCD1-206ENST00000549274 SPINT4Q6UDR6 99 aa4.15□□□□□ -1.75
SMARCD1-206ENST00000549274 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
SMARCD1-206ENST00000549274 KRTAP12-1P59990 96 aa4.12□□□□□ -1.75
SMARCD1-206ENST00000549274 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
SMARCD1-206ENST00000549274 A8MU10 97 aa4.11□□□□□ -1.75
SMARCD1-206ENST00000549274 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
SMARCD1-206ENST00000549274 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
SMARCD1-206ENST00000549274 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
SMARCD1-206ENST00000549274 MT1XP80297 61 aa4.06□□□□□ -1.76
SMARCD1-206ENST00000549274 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
SMARCD1-206ENST00000549274 BRK1Q8WUW1 75 aa3.94□□□□□ -1.78
SMARCD1-206ENST00000549274 TNP1P09430 55 aa3.93□□□□□ -1.78
SMARCD1-206ENST00000549274 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms