RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 SNURFQ9Y675 71 aa4.25□□□□□ -1.73
DEPDC4-207ENST00000549249 H3BPC8 53 aa4.24□□□□□ -1.73
DEPDC4-207ENST00000549249 ATP11AUNQ6ZP68 121 aa4.24□□□□□ -1.73
DEPDC4-207ENST00000549249 C1orf64Q8NEQ6 169 aa4.24□□□□□ -1.73
DEPDC4-207ENST00000549249 KLKP1Q107X0 134 aa4.23□□□□□ -1.73
DEPDC4-207ENST00000549249 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
DEPDC4-207ENST00000549249 IGKV2D-30A0A075B6S6 120 aa4.22□□□□□ -1.73
DEPDC4-207ENST00000549249 LOC101927531A0A1B0GV80 90 aa4.22□□□□□ -1.73
DEPDC4-207ENST00000549249 SEC61BP60468 96 aaKnown RBP4.21□□□□□ -1.74
DEPDC4-207ENST00000549249 C7orf65Q6ZTY9 151 aa4.21□□□□□ -1.74
DEPDC4-207ENST00000549249 KRTAP4-1Q9BYQ7 146 aa4.21□□□□□ -1.74
DEPDC4-207ENST00000549249 CYP4F30PQ9H0H9 118 aa4.21□□□□□ -1.74
DEPDC4-207ENST00000549249 SPINK7P58062 85 aa4.2□□□□□ -1.74
DEPDC4-207ENST00000549249 H7BZZ5 65 aa4.18□□□□□ -1.74
DEPDC4-207ENST00000549249 MUC2Q02817 5179 aa4.17□□□□□ -1.74
DEPDC4-207ENST00000549249 HRES1P13985 223 aa4.16□□□□□ -1.74
DEPDC4-207ENST00000549249 NDUFC1O43677 76 aa4.14□□□□□ -1.75
DEPDC4-207ENST00000549249 MPLKIPQ8TAP9 179 aa4.13□□□□□ -1.75
DEPDC4-207ENST00000549249 C4orf26Q17RF5 130 aa4.12□□□□□ -1.75
DEPDC4-207ENST00000549249 FAT4Q6V0I7 4981 aa4.12□□□□□ -1.75
DEPDC4-207ENST00000549249 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
DEPDC4-207ENST00000549249 SPANXA2-OT1Q8N9U9 137 aa4.11□□□□□ -1.75
DEPDC4-207ENST00000549249 TMEM258P61165 79 aa4.09□□□□□ -1.75
DEPDC4-207ENST00000549249 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.75
DEPDC4-207ENST00000549249 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
DEPDC4-207ENST00000549249 COX6B2Q6YFQ2 88 aa4.08□□□□□ -1.76
DEPDC4-207ENST00000549249 FAM236DA0A1B0GTK5 79 aa4.07□□□□□ -1.76
DEPDC4-207ENST00000549249 FAM236CP0DP71 79 aa4.07□□□□□ -1.76
DEPDC4-207ENST00000549249 DMAC1Q96GE9 116 aa4.07□□□□□ -1.76
DEPDC4-207ENST00000549249 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
DEPDC4-207ENST00000549249 RBM12B-AS1Q9P1G2 102 aa4.05□□□□□ -1.76
DEPDC4-207ENST00000549249 ATP5EP56381 51 aaPredicted RBP4.04□□□□□ -1.76
DEPDC4-207ENST00000549249 A8MUN3 132 aa4.02□□□□□ -1.77
DEPDC4-207ENST00000549249 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
DEPDC4-207ENST00000549249 ACYP2P14621 99 aa4□□□□□ -1.77
DEPDC4-207ENST00000549249 H1FX-AS1Q4G0G2 97 aa4□□□□□ -1.77
DEPDC4-207ENST00000549249 COA5Q86WW8 74 aa4□□□□□ -1.77
DEPDC4-207ENST00000549249 FLGP20930 4061 aaPredicted RBP3.98□□□□□ -1.77
DEPDC4-207ENST00000549249 KRTAP10-6P60371 365 aaPredicted RBP3.97□□□□□ -1.77
DEPDC4-207ENST00000549249 SERP1Q9Y6X1 66 aa3.97□□□□□ -1.77
DEPDC4-207ENST00000549249 LCA10Q71F78 164 aa3.96□□□□□ -1.78
DEPDC4-207ENST00000549249 S4R3F8 94 aa3.96□□□□□ -1.78
DEPDC4-207ENST00000549249 CHKB-CPT1BH3BT56 60 aa3.93□□□□□ -1.78
DEPDC4-207ENST00000549249 MT1HP80294 61 aa3.92□□□□□ -1.78
DEPDC4-207ENST00000549249 RPS28P62857 69 aaKnown RBP3.9□□□□□ -1.79
DEPDC4-207ENST00000549249 CRCT1Q9UGL9 99 aa3.9□□□□□ -1.79
DEPDC4-207ENST00000549249 FSIP2Q5CZC0 6907 aa3.89□□□□□ -1.79
DEPDC4-207ENST00000549249 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
DEPDC4-207ENST00000549249 M0R2T5 61 aa3.85□□□□□ -1.79
DEPDC4-207ENST00000549249 CSAG1Q6PB30 78 aa3.85□□□□□ -1.79
DEPDC4-207ENST00000549249 SPTSSBQ8NFR3 76 aa3.85□□□□□ -1.79
DEPDC4-207ENST00000549249 SMIM26A0A096LP01 95 aa3.83□□□□□ -1.8
DEPDC4-207ENST00000549249 LINC01558Q9Y6Z2 57 aa3.82□□□□□ -1.8
DEPDC4-207ENST00000549249 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
DEPDC4-207ENST00000549249 H0YAA0 97 aa3.79□□□□□ -1.8
DEPDC4-207ENST00000549249 Q1T7F1 81 aa3.79□□□□□ -1.8
DEPDC4-207ENST00000549249 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
DEPDC4-207ENST00000549249 P0C880 135 aa3.77□□□□□ -1.81
DEPDC4-207ENST00000549249 ADM2Q7Z4H4 148 aa3.77□□□□□ -1.81
DEPDC4-207ENST00000549249 A0A1B0GU69 56 aa3.75□□□□□ -1.81
DEPDC4-207ENST00000549249 MT2AP02795 61 aa3.75□□□□□ -1.81
DEPDC4-207ENST00000549249 V9GYY9 64 aa3.75□□□□□ -1.81
DEPDC4-207ENST00000549249 PSPHP1O15172 72 aa3.74□□□□□ -1.81
DEPDC4-207ENST00000549249 PRR15LQ9BU68 103 aa3.74□□□□□ -1.81
DEPDC4-207ENST00000549249 MT1FP04733 61 aa3.73□□□□□ -1.81
DEPDC4-207ENST00000549249 Q5VV11 94 aa3.73□□□□□ -1.81
DEPDC4-207ENST00000549249 SEC61GP60059 68 aa3.72□□□□□ -1.81
DEPDC4-207ENST00000549249 KRTAP13-4Q3LI77 160 aa3.69□□□□□ -1.82
DEPDC4-207ENST00000549249 A0A1B0GU33 70 aa3.67□□□□□ -1.82
DEPDC4-207ENST00000549249 MT3P25713 68 aa3.67□□□□□ -1.82
DEPDC4-207ENST00000549249 KRTAP10-10P60014 251 aa3.67□□□□□ -1.82
DEPDC4-207ENST00000549249 SPATA8Q6RVD6 105 aa3.64□□□□□ -1.83
DEPDC4-207ENST00000549249 M0QZ58 72 aa3.63□□□□□ -1.83
DEPDC4-207ENST00000549249 CRIPTQ9P021 101 aa3.62□□□□□ -1.83
DEPDC4-207ENST00000549249 R4GN34 69 aa3.62□□□□□ -1.83
DEPDC4-207ENST00000549249 UQCR11O14957 56 aa3.61□□□□□ -1.83
DEPDC4-207ENST00000549249 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
DEPDC4-207ENST00000549249 A6NED7 52 aa3.6□□□□□ -1.83
DEPDC4-207ENST00000549249 A8MU10 97 aa3.59□□□□□ -1.83
DEPDC4-207ENST00000549249 USH2AO75445 5202 aa3.59□□□□□ -1.83
DEPDC4-207ENST00000549249 MIR22HGQ0VDD5 57 aa3.58□□□□□ -1.84
DEPDC4-207ENST00000549249 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
DEPDC4-207ENST00000549249 A0A0D9SG42 100 aa3.56□□□□□ -1.84
DEPDC4-207ENST00000549249 LINC01554Q52M75 96 aa3.56□□□□□ -1.84
DEPDC4-207ENST00000549249 KRTAP19-8Q3LI54 63 aa3.55□□□□□ -1.84
DEPDC4-207ENST00000549249 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
DEPDC4-207ENST00000549249 CDC42SE1Q9NRR8 79 aa3.54□□□□□ -1.84
DEPDC4-207ENST00000549249 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
DEPDC4-207ENST00000549249 MT1BP07438 61 aa3.53□□□□□ -1.84
DEPDC4-207ENST00000549249 KRTAP12-1P59990 96 aa3.52□□□□□ -1.85
DEPDC4-207ENST00000549249 A6NN06 94 aa3.5□□□□□ -1.85
DEPDC4-207ENST00000549249 KRTAP12-2P59991 146 aa3.5□□□□□ -1.85
DEPDC4-207ENST00000549249 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
DEPDC4-207ENST00000549249 SPINT4Q6UDR6 99 aa3.47□□□□□ -1.85
DEPDC4-207ENST00000549249 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
DEPDC4-207ENST00000549249 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
DEPDC4-207ENST00000549249 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
DEPDC4-207ENST00000549249 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
DEPDC4-207ENST00000549249 PLAC4Q8WY50 150 aa3.43□□□□□ -1.86
DEPDC4-207ENST00000549249 KRTAP5-9P26371 169 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms