RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 A0A1B0GV90 55 aa6.54□□□□□ -1.36
PTCH1-217ENST00000548420 KRTAP3-1Q9BYR8 98 aa6.54□□□□□ -1.36
PTCH1-217ENST00000548420 SVIPQ8NHG7 77 aa6.52□□□□□ -1.37
PTCH1-217ENST00000548420 LINC00643Q86TS7 51 aa6.48□□□□□ -1.37
PTCH1-217ENST00000548420 CYP4F30PQ9H0H9 118 aa6.47□□□□□ -1.37
PTCH1-217ENST00000548420 HIST1H4AP62805 103 aaKnown RBP6.46□□□□□ -1.38
PTCH1-217ENST00000548420 C1orf64Q8NEQ6 169 aa6.46□□□□□ -1.38
PTCH1-217ENST00000548420 TRAV22A0A0B4J277 110 aa6.45□□□□□ -1.38
PTCH1-217ENST00000548420 SPRR2FQ96RM1 72 aa6.44□□□□□ -1.38
PTCH1-217ENST00000548420 UQCRQO14949 82 aa6.43□□□□□ -1.38
PTCH1-217ENST00000548420 LCE1AQ5T7P2 110 aa6.42□□□□□ -1.38
PTCH1-217ENST00000548420 A0A087WVE0 104 aa6.41□□□□□ -1.38
PTCH1-217ENST00000548420 LOC100996750A0A140TA64 210 aa6.41□□□□□ -1.38
PTCH1-217ENST00000548420 LOC101927531A0A1B0GV80 90 aa6.41□□□□□ -1.38
PTCH1-217ENST00000548420 KRTAP4-6Q9BYQ5 205 aa6.41□□□□□ -1.38
PTCH1-217ENST00000548420 MT1BP07438 61 aa6.4□□□□□ -1.38
PTCH1-217ENST00000548420 KRTAP10-5P60370 271 aa6.4□□□□□ -1.38
PTCH1-217ENST00000548420 S4R3F8 94 aa6.4□□□□□ -1.38
PTCH1-217ENST00000548420 C5orf47Q569G3 176 aa6.38□□□□□ -1.39
PTCH1-217ENST00000548420 LCA10Q71F78 164 aa6.38□□□□□ -1.39
PTCH1-217ENST00000548420 ATOX1O00244 68 aa6.37□□□□□ -1.39
PTCH1-217ENST00000548420 SPRR2DP22532 72 aa6.37□□□□□ -1.39
PTCH1-217ENST00000548420 H0Y9P7 68 aa6.36□□□□□ -1.39
PTCH1-217ENST00000548420 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
PTCH1-217ENST00000548420 J3QR89 54 aa6.35□□□□□ -1.39
PTCH1-217ENST00000548420 OCR1Q9BZK8 76 aa6.34□□□□□ -1.39
PTCH1-217ENST00000548420 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
PTCH1-217ENST00000548420 DSTQ03001 7570 aaKnown RBP6.28□□□□□ -1.4
PTCH1-217ENST00000548420 LINC00208Q96KT6 92 aa6.27□□□□□ -1.41
PTCH1-217ENST00000548420 KLKP1Q107X0 134 aa6.26□□□□□ -1.41
PTCH1-217ENST00000548420 MP68P56378 58 aa6.24□□□□□ -1.41
PTCH1-217ENST00000548420 FAM236AA0A1B0GUQ0 79 aa6.23□□□□□ -1.41
PTCH1-217ENST00000548420 FAM236BA0A1B0GV22 79 aa6.23□□□□□ -1.41
PTCH1-217ENST00000548420 A8MUN3 132 aa6.23□□□□□ -1.41
PTCH1-217ENST00000548420 SPRR2GQ9BYE4 73 aa6.22□□□□□ -1.41
PTCH1-217ENST00000548420 H3BPC8 53 aa6.21□□□□□ -1.42
PTCH1-217ENST00000548420 KRTAP4-9Q9BYQ8 210 aa6.21□□□□□ -1.42
PTCH1-217ENST00000548420 IMUPQ9GZP8 106 aa6.2□□□□□ -1.42
PTCH1-217ENST00000548420 KRTAP19-8Q3LI54 63 aa6.18□□□□□ -1.42
PTCH1-217ENST00000548420 Q5VV11 94 aa6.18□□□□□ -1.42
PTCH1-217ENST00000548420 NDUFC1O43677 76 aa6.17□□□□□ -1.42
PTCH1-217ENST00000548420 H0YAA0 97 aa6.16□□□□□ -1.42
PTCH1-217ENST00000548420 K7ERU9 68 aa6.16□□□□□ -1.42
PTCH1-217ENST00000548420 SCGB1A1P11684 91 aa6.16□□□□□ -1.42
PTCH1-217ENST00000548420 MT-ATP8P03928 68 aa6.14□□□□□ -1.43
PTCH1-217ENST00000548420 CRIPTQ9P021 101 aa6.13□□□□□ -1.43
PTCH1-217ENST00000548420 DMAC1Q96GE9 116 aa6.09□□□□□ -1.43
PTCH1-217ENST00000548420 TRAV7A0A075B6U4 112 aa6.06□□□□□ -1.44
PTCH1-217ENST00000548420 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
PTCH1-217ENST00000548420 SMIM20Q8N5G0 67 aa6.06□□□□□ -1.44
PTCH1-217ENST00000548420 ADM2Q7Z4H4 148 aa6.03□□□□□ -1.44
PTCH1-217ENST00000548420 KRTAP5-10Q6L8G5 202 aa6.02□□□□□ -1.45
PTCH1-217ENST00000548420 AHNAK2Q8IVF2 5795 aa5.99□□□□□ -1.45
PTCH1-217ENST00000548420 HMCN1Q96RW7 5635 aa5.96□□□□□ -1.46
PTCH1-217ENST00000548420 ACYP2P14621 99 aa5.95□□□□□ -1.46
PTCH1-217ENST00000548420 P0C880 135 aa5.94□□□□□ -1.46
PTCH1-217ENST00000548420 LCE1DQ5T752 114 aa5.91□□□□□ -1.46
PTCH1-217ENST00000548420 C20orf197Q8N268 126 aa5.9□□□□□ -1.46
PTCH1-217ENST00000548420 KRTAP5-7Q6L8G8 165 aa5.89□□□□□ -1.47
PTCH1-217ENST00000548420 SNURFQ9Y675 71 aa5.89□□□□□ -1.47
PTCH1-217ENST00000548420 SERP2Q8N6R1 65 aa5.88□□□□□ -1.47
PTCH1-217ENST00000548420 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
PTCH1-217ENST00000548420 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
PTCH1-217ENST00000548420 SPANXA2-OT1Q8N9U9 137 aa5.86□□□□□ -1.47
PTCH1-217ENST00000548420 R4GN34 69 aa5.86□□□□□ -1.47
PTCH1-217ENST00000548420 SPTSSBQ8NFR3 76 aa5.83□□□□□ -1.48
PTCH1-217ENST00000548420 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
PTCH1-217ENST00000548420 M0QZ58 72 aa5.81□□□□□ -1.48
PTCH1-217ENST00000548420 MT1XP80297 61 aa5.79□□□□□ -1.48
PTCH1-217ENST00000548420 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
PTCH1-217ENST00000548420 CHKB-CPT1BH3BT56 60 aa5.77□□□□□ -1.49
PTCH1-217ENST00000548420 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
PTCH1-217ENST00000548420 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
PTCH1-217ENST00000548420 COX7CP15954 63 aa5.72□□□□□ -1.49
PTCH1-217ENST00000548420 KRTAP12-2P59991 146 aa5.71□□□□□ -1.5
PTCH1-217ENST00000548420 LINC01554Q52M75 96 aa5.7□□□□□ -1.5
PTCH1-217ENST00000548420 MT4P47944 62 aa5.69□□□□□ -1.5
PTCH1-217ENST00000548420 COA5Q86WW8 74 aa5.65□□□□□ -1.5
PTCH1-217ENST00000548420 H7BZZ5 65 aa5.64□□□□□ -1.51
PTCH1-217ENST00000548420 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
PTCH1-217ENST00000548420 CYSTM1Q9H1C7 97 aa5.63□□□□□ -1.51
PTCH1-217ENST00000548420 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
PTCH1-217ENST00000548420 PCP4P48539 62 aa5.61□□□□□ -1.51
PTCH1-217ENST00000548420 KRTAP13-4Q3LI77 160 aa5.59□□□□□ -1.51
PTCH1-217ENST00000548420 KRTAP4-12Q9BQ66 201 aa5.57□□□□□ -1.52
PTCH1-217ENST00000548420 LCE4AQ5TA78 99 aa5.54□□□□□ -1.52
PTCH1-217ENST00000548420 ANAPC13Q9BS18 74 aa5.52□□□□□ -1.53
PTCH1-217ENST00000548420 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
PTCH1-217ENST00000548420 KRTAP10-12P60413 245 aa5.51□□□□□ -1.53
PTCH1-217ENST00000548420 SEC61GP60059 68 aa5.48□□□□□ -1.53
PTCH1-217ENST00000548420 SERP1Q9Y6X1 66 aa5.48□□□□□ -1.53
PTCH1-217ENST00000548420 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
PTCH1-217ENST00000548420 CCDC179H3BU77 68 aa5.44□□□□□ -1.54
PTCH1-217ENST00000548420 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
PTCH1-217ENST00000548420 KRTAP9-4Q9BYQ2 154 aa5.44□□□□□ -1.54
PTCH1-217ENST00000548420 A0A1B0GU33 70 aa5.42□□□□□ -1.54
PTCH1-217ENST00000548420 A0A0A0MQY5 61 aa5.41□□□□□ -1.54
PTCH1-217ENST00000548420 SPATA8Q6RVD6 105 aa5.4□□□□□ -1.54
PTCH1-217ENST00000548420 CAMK2N1Q7Z7J9 78 aa5.38□□□□□ -1.55
PTCH1-217ENST00000548420 A0A0D9SG42 100 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms