RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 Q96NJ1 140 aa1.43□□□□□ -2.18
PTCH1-216ENST00000548379 HMCN1Q96RW7 5635 aa1.42□□□□□ -2.18
PTCH1-216ENST00000548379 TRAV13-2A0A0B4J235 113 aa1.42□□□□□ -2.18
PTCH1-216ENST00000548379 J3QR89 54 aa1.42□□□□□ -2.18
PTCH1-216ENST00000548379 Q6JHZ5 121 aa1.42□□□□□ -2.18
PTCH1-216ENST00000548379 TEN1Q86WV5 123 aa1.42□□□□□ -2.18
PTCH1-216ENST00000548379 LINC00308Q8TCZ7 52 aa1.42□□□□□ -2.18
PTCH1-216ENST00000548379 IGLV5-48A0A075B6I7 105 aa1.41□□□□□ -2.18
PTCH1-216ENST00000548379 TRBV7-7A0A0K0K1E9 115 aa1.41□□□□□ -2.18
PTCH1-216ENST00000548379 CLLU1Q5K131 121 aa1.41□□□□□ -2.18
PTCH1-216ENST00000548379 K7ERU9 68 aa1.4□□□□□ -2.19
PTCH1-216ENST00000548379 SNCGO76070 127 aa1.4□□□□□ -2.19
PTCH1-216ENST00000548379 MT2AP02795 61 aa1.4□□□□□ -2.19
PTCH1-216ENST00000548379 PMCHL2Q9BQD1 86 aa1.4□□□□□ -2.19
PTCH1-216ENST00000548379 SNHG12Q9BXW3 62 aa1.4□□□□□ -2.19
PTCH1-216ENST00000548379 USH2AO75445 5202 aa1.4□□□□□ -2.19
PTCH1-216ENST00000548379 FAM236AA0A1B0GUQ0 79 aa1.39□□□□□ -2.19
PTCH1-216ENST00000548379 FAM236BA0A1B0GV22 79 aa1.39□□□□□ -2.19
PTCH1-216ENST00000548379 hADV29S1A0JD25 119 aa1.39□□□□□ -2.19
PTCH1-216ENST00000548379 APOC3P02656 99 aa1.39□□□□□ -2.19
PTCH1-216ENST00000548379 MT1FP04733 61 aa1.39□□□□□ -2.19
PTCH1-216ENST00000548379 IFITM1P13164 125 aa1.39□□□□□ -2.19
PTCH1-216ENST00000548379 MIR22HGQ0VDD5 57 aa1.39□□□□□ -2.19
PTCH1-216ENST00000548379 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
PTCH1-216ENST00000548379 OCIAD2Q56VL3 154 aa1.39□□□□□ -2.19
PTCH1-216ENST00000548379 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.39□□□□□ -2.19
PTCH1-216ENST00000548379 SVBPQ8N300 66 aa1.39□□□□□ -2.19
PTCH1-216ENST00000548379 C12orf57Q99622 126 aa1.39□□□□□ -2.19
PTCH1-216ENST00000548379 NEBP20929 6669 aa1.39□□□□□ -2.19
PTCH1-216ENST00000548379 FCGBPQ9Y6R7 5405 aaPredicted RBP1.38□□□□□ -2.19
PTCH1-216ENST00000548379 A6NN06 94 aa1.38□□□□□ -2.19
PTCH1-216ENST00000548379 KRTAP19-6Q3LI70 58 aa1.38□□□□□ -2.19
PTCH1-216ENST00000548379 CASC2Q6XLA1 102 aa1.38□□□□□ -2.19
PTCH1-216ENST00000548379 Q6ZQY7 126 aa1.38□□□□□ -2.19
PTCH1-216ENST00000548379 PPDPFLQ8WWR9 84 aa1.38□□□□□ -2.19
PTCH1-216ENST00000548379 ORMDL1Q9P0S3 153 aa1.38□□□□□ -2.19
PTCH1-216ENST00000548379 SSPOA2VEC9 5147 aa1.37□□□□□ -2.19
PTCH1-216ENST00000548379 F8W1H4 67 aa1.37□□□□□ -2.19
PTCH1-216ENST00000548379 COX7CP15954 63 aa1.37□□□□□ -2.19
PTCH1-216ENST00000548379 BVES-AS1Q5T3Y7 98 aa1.37□□□□□ -2.19
PTCH1-216ENST00000548379 LINC00575Q6W349 94 aa1.37□□□□□ -2.19
PTCH1-216ENST00000548379 MUSTN1Q8IVN3 82 aa1.37□□□□□ -2.19
PTCH1-216ENST00000548379 SMIM11BQ8TCY0 68 aa1.37□□□□□ -2.19
PTCH1-216ENST00000548379 A0A1B0GV90 55 aa1.36□□□□□ -2.19
PTCH1-216ENST00000548379 SYS1-DBNDD2H3BUS1 97 aa1.36□□□□□ -2.19
PTCH1-216ENST00000548379 H3BUT2 72 aa1.36□□□□□ -2.19
PTCH1-216ENST00000548379 C3orf79P0CE67 100 aa1.36□□□□□ -2.19
PTCH1-216ENST00000548379 KRTAP20-1Q3LI63 56 aa1.36□□□□□ -2.19
PTCH1-216ENST00000548379 NAA38Q9BRA0 125 aaKnown RBP1.36□□□□□ -2.19
PTCH1-216ENST00000548379 CDC42SE1Q9NRR8 79 aa1.36□□□□□ -2.19
PTCH1-216ENST00000548379 LINC01545Q5VT33 79 aa1.35□□□□□ -2.19
PTCH1-216ENST00000548379 FLGP20930 4061 aaPredicted RBP1.35□□□□□ -2.19
PTCH1-216ENST00000548379 LOC110117498A0A087WWA1 95 aa1.34□□□□□ -2.19
PTCH1-216ENST00000548379 INE1O15225 51 aa1.34□□□□□ -2.19
PTCH1-216ENST00000548379 DLEU1O43261 78 aa1.34□□□□□ -2.19
PTCH1-216ENST00000548379 SPINK7P58062 85 aa1.34□□□□□ -2.19
PTCH1-216ENST00000548379 KRTDAPP60985 99 aa1.34□□□□□ -2.19
PTCH1-216ENST00000548379 ATOH7Q8N100 152 aa1.34□□□□□ -2.19
PTCH1-216ENST00000548379 DSCR8Q96T75 97 aa1.34□□□□□ -2.19
PTCH1-216ENST00000548379 CYSTM1Q9H1C7 97 aa1.34□□□□□ -2.19
PTCH1-216ENST00000548379 SNURFQ9Y675 71 aa1.34□□□□□ -2.19
PTCH1-216ENST00000548379 H0YGX0 51 aa1.33□□□□□ -2.2
PTCH1-216ENST00000548379 WFDC13Q8IUB5 93 aa1.33□□□□□ -2.2
PTCH1-216ENST00000548379 TRBV7-4A0A0J9YYF1 115 aa1.32□□□□□ -2.2
PTCH1-216ENST00000548379 NDUFB1O75438 58 aa1.32□□□□□ -2.2
PTCH1-216ENST00000548379 DNAL4O96015 105 aa1.32□□□□□ -2.2
PTCH1-216ENST00000548379 IGKV3D-7A0A0C4DH55 119 aa1.31□□□□□ -2.2
PTCH1-216ENST00000548379 H1FX-AS1Q4G0G2 97 aa1.31□□□□□ -2.2
PTCH1-216ENST00000548379 CCKP06307 115 aa1.3□□□□□ -2.2
PTCH1-216ENST00000548379 Q5VV11 94 aa1.3□□□□□ -2.2
PTCH1-216ENST00000548379 JMJD7-PLA2G4BH0Y9G9 81 aa1.29□□□□□ -2.2
PTCH1-216ENST00000548379 KRTAP2-3P0C7H8 128 aa1.29□□□□□ -2.2
PTCH1-216ENST00000548379 KRTAP2-4Q9BYR9 128 aa1.29□□□□□ -2.2
PTCH1-216ENST00000548379 LINC00472Q9H8W2 130 aa1.29□□□□□ -2.2
PTCH1-216ENST00000548379 COX6CP09669 75 aa1.28□□□□□ -2.2
PTCH1-216ENST00000548379 CSAG1Q6PB30 78 aa1.28□□□□□ -2.2
PTCH1-216ENST00000548379 PDE6GP18545 87 aa1.27□□□□□ -2.21
PTCH1-216ENST00000548379 RBM3P98179 157 aaKnown RBP1.27□□□□□ -2.21
PTCH1-216ENST00000548379 PRO1854Q9UHT4 67 aa1.27□□□□□ -2.21
PTCH1-216ENST00000548379 COX8AP10176 69 aa1.25□□□□□ -2.21
PTCH1-216ENST00000548379 SPRR2EP22531 72 aa1.25□□□□□ -2.21
PTCH1-216ENST00000548379 SPRR2BP35325 72 aa1.25□□□□□ -2.21
PTCH1-216ENST00000548379 SPRR2AP35326 72 aa1.25□□□□□ -2.21
PTCH1-216ENST00000548379 SPATA45Q537H7 98 aa1.25□□□□□ -2.21
PTCH1-216ENST00000548379 MRPL34Q9BQ48 92 aaKnown RBP1.25□□□□□ -2.21
PTCH1-216ENST00000548379 KRTAP2-1Q9BYU5 128 aa1.25□□□□□ -2.21
PTCH1-216ENST00000548379 S100A1P23297 94 aa1.24□□□□□ -2.21
PTCH1-216ENST00000548379 NREPQ16612 68 aa1.24□□□□□ -2.21
PTCH1-216ENST00000548379 DMAC1Q96GE9 116 aa1.24□□□□□ -2.21
PTCH1-216ENST00000548379 C14orf144Q96I85 54 aa1.24□□□□□ -2.21
PTCH1-216ENST00000548379 SPRR2FQ96RM1 72 aa1.24□□□□□ -2.21
PTCH1-216ENST00000548379 SPRR2GQ9BYE4 73 aa1.24□□□□□ -2.21
PTCH1-216ENST00000548379 HIGD1BQ9P298 99 aa1.24□□□□□ -2.21
PTCH1-216ENST00000548379 S4R3F8 94 aa1.24□□□□□ -2.21
PTCH1-216ENST00000548379 MUC12Q9UKN1 5478 aa1.24□□□□□ -2.21
PTCH1-216ENST00000548379 CCDC179H3BU77 68 aa1.23□□□□□ -2.21
PTCH1-216ENST00000548379 K7EQZ3 153 aa1.23□□□□□ -2.21
PTCH1-216ENST00000548379 MT1BP07438 61 aa1.23□□□□□ -2.21
PTCH1-216ENST00000548379 KLKP1Q107X0 134 aa1.23□□□□□ -2.21
PTCH1-216ENST00000548379 KRTAP19-8Q3LI54 63 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms