RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 Q1T7F1 81 aa8.5□□□□□ -1.05
KRT4-201ENST00000548097 SPANXA2-OT1Q8N9U9 137 aa8.49□□□□□ -1.05
KRT4-201ENST00000548097 V9GYY9 64 aa8.47□□□□□ -1.05
KRT4-201ENST00000548097 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.06
KRT4-201ENST00000548097 H1FX-AS1Q4G0G2 97 aa8.45□□□□□ -1.06
KRT4-201ENST00000548097 BRK1Q8WUW1 75 aa8.45□□□□□ -1.06
KRT4-201ENST00000548097 M0R2T5 61 aa8.42□□□□□ -1.06
KRT4-201ENST00000548097 LCA10Q71F78 164 aa8.31□□□□□ -1.08
KRT4-201ENST00000548097 S4R3F8 94 aa8.31□□□□□ -1.08
KRT4-201ENST00000548097 DMAC1Q96GE9 116 aa8.31□□□□□ -1.08
KRT4-201ENST00000548097 A8MUN3 132 aa8.29□□□□□ -1.08
KRT4-201ENST00000548097 KRTAP10-6P60371 365 aaPredicted RBP8.26□□□□□ -1.09
KRT4-201ENST00000548097 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
KRT4-201ENST00000548097 PSPHP1O15172 72 aa8.24□□□□□ -1.09
KRT4-201ENST00000548097 LORP23490 312 aaPredicted RBP8.22□□□□□ -1.09
KRT4-201ENST00000548097 Q5VV11 94 aa8.2□□□□□ -1.1
KRT4-201ENST00000548097 COA5Q86WW8 74 aa8.2□□□□□ -1.1
KRT4-201ENST00000548097 ACYP2P14621 99 aa8.19□□□□□ -1.1
KRT4-201ENST00000548097 CSAG1Q6PB30 78 aa8.15□□□□□ -1.1
KRT4-201ENST00000548097 PRR15LQ9BU68 103 aa8.15□□□□□ -1.11
KRT4-201ENST00000548097 KRTAP9-8Q9BYQ0 159 aa8.15□□□□□ -1.11
KRT4-201ENST00000548097 CHKB-CPT1BH3BT56 60 aa8.13□□□□□ -1.11
KRT4-201ENST00000548097 LINC01558Q9Y6Z2 57 aa8.1□□□□□ -1.11
KRT4-201ENST00000548097 PMAIP1Q13794 54 aa8.1□□□□□ -1.11
KRT4-201ENST00000548097 MT2AP02795 61 aa8.09□□□□□ -1.11
KRT4-201ENST00000548097 MT1FP04733 61 aa8.05□□□□□ -1.12
KRT4-201ENST00000548097 A6NED7 52 aa8.03□□□□□ -1.12
KRT4-201ENST00000548097 CDC42SE1Q9NRR8 79 aa8.02□□□□□ -1.13
KRT4-201ENST00000548097 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
KRT4-201ENST00000548097 SPTSSBQ8NFR3 76 aa7.93□□□□□ -1.14
KRT4-201ENST00000548097 SEC61GP60059 68 aa7.92□□□□□ -1.14
KRT4-201ENST00000548097 ADM2Q7Z4H4 148 aa7.92□□□□□ -1.14
KRT4-201ENST00000548097 A8MU10 97 aa7.92□□□□□ -1.14
KRT4-201ENST00000548097 KTN1-AS1Q86SY8 53 aa7.92□□□□□ -1.14
KRT4-201ENST00000548097 H0YAA0 97 aa7.87□□□□□ -1.15
KRT4-201ENST00000548097 A6NN06 94 aa7.87□□□□□ -1.15
KRT4-201ENST00000548097 KRTAP9-3Q9BYQ3 159 aa7.85□□□□□ -1.15
KRT4-201ENST00000548097 P0C880 135 aa7.85□□□□□ -1.15
KRT4-201ENST00000548097 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
KRT4-201ENST00000548097 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
KRT4-201ENST00000548097 KRTAP9-2Q9BYQ4 174 aa7.78□□□□□ -1.16
KRT4-201ENST00000548097 A0A1B0GU69 56 aa7.76□□□□□ -1.17
KRT4-201ENST00000548097 LCE2BO14633 110 aa7.75□□□□□ -1.17
KRT4-201ENST00000548097 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
KRT4-201ENST00000548097 FSIP2Q5CZC0 6907 aa7.72□□□□□ -1.17
KRT4-201ENST00000548097 SPATA8Q6RVD6 105 aa7.69□□□□□ -1.18
KRT4-201ENST00000548097 UQCR11O14957 56 aa7.67□□□□□ -1.18
KRT4-201ENST00000548097 USH2AO75445 5202 aa7.66□□□□□ -1.18
KRT4-201ENST00000548097 SPRR2GQ9BYE4 73 aa7.66□□□□□ -1.18
KRT4-201ENST00000548097 CRIPTQ9P021 101 aa7.66□□□□□ -1.18
KRT4-201ENST00000548097 R4GN34 69 aa7.65□□□□□ -1.18
KRT4-201ENST00000548097 M0QZ58 72 aa7.64□□□□□ -1.19
KRT4-201ENST00000548097 MIR22HGQ0VDD5 57 aa7.62□□□□□ -1.19
KRT4-201ENST00000548097 KRTAP13-4Q3LI77 160 aa7.57□□□□□ -1.2
KRT4-201ENST00000548097 LINC01554Q52M75 96 aa7.55□□□□□ -1.2
KRT4-201ENST00000548097 KRTAP19-8Q3LI54 63 aa7.52□□□□□ -1.2
KRT4-201ENST00000548097 A0A1B0GU33 70 aa7.52□□□□□ -1.21
KRT4-201ENST00000548097 MT1BP07438 61 aa7.51□□□□□ -1.21
KRT4-201ENST00000548097 SSPOA2VEC9 5147 aa7.49□□□□□ -1.21
KRT4-201ENST00000548097 CRCT1Q9UGL9 99 aa7.42□□□□□ -1.22
KRT4-201ENST00000548097 A0A0D9SG42 100 aa7.4□□□□□ -1.23
KRT4-201ENST00000548097 PRAC1Q96KF2 57 aa7.37□□□□□ -1.23
KRT4-201ENST00000548097 PLAC4Q8WY50 150 aa7.33□□□□□ -1.24
KRT4-201ENST00000548097 KRTAP9-6A0A140TA67 174 aa7.31□□□□□ -1.24
KRT4-201ENST00000548097 KRTAP19-6Q3LI70 58 aa7.3□□□□□ -1.24
KRT4-201ENST00000548097 SPINT4Q6UDR6 99 aa7.24□□□□□ -1.25
KRT4-201ENST00000548097 FCGBPQ9Y6R7 5405 aaPredicted RBP7.23□□□□□ -1.25
KRT4-201ENST00000548097 KRTAP12-1P59990 96 aa7.21□□□□□ -1.26
KRT4-201ENST00000548097 K7ERS5 55 aa7.2□□□□□ -1.26
KRT4-201ENST00000548097 KRTAP12-2P59991 146 aa7.2□□□□□ -1.26
KRT4-201ENST00000548097 KRTAP10-5P60370 271 aa7.18□□□□□ -1.26
KRT4-201ENST00000548097 MT1XP80297 61 aa7.17□□□□□ -1.26
KRT4-201ENST00000548097 CAMK2N1Q7Z7J9 78 aa7.12□□□□□ -1.27
KRT4-201ENST00000548097 KRTAP25-1Q3LHN0 102 aa7.1□□□□□ -1.27
KRT4-201ENST00000548097 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
KRT4-201ENST00000548097 ROMO1P60602 79 aa6.98□□□□□ -1.29
KRT4-201ENST00000548097 MACF1Q9UPN3 7388 aaKnown RBP6.97□□□□□ -1.29
KRT4-201ENST00000548097 KRTAP10-7P60409 375 aaPredicted RBP6.9□□□□□ -1.3
KRT4-201ENST00000548097 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.89□□□□□ -1.31
KRT4-201ENST00000548097 SYNE2Q8WXH0 6885 aaKnown RBP6.88□□□□□ -1.31
KRT4-201ENST00000548097 KMT2DO14686 5537 aa6.88□□□□□ -1.31
KRT4-201ENST00000548097 C10orf95Q9H7T3 257 aa6.87□□□□□ -1.31
KRT4-201ENST00000548097 KRTAP10-12P60413 245 aa6.78□□□□□ -1.32
KRT4-201ENST00000548097 KRTAP4-8A0A0G2JLE6 195 aa6.77□□□□□ -1.33
KRT4-201ENST00000548097 KRTAP4-8Q9BYQ9 185 aa6.77□□□□□ -1.33
KRT4-201ENST00000548097 H3BS24 57 aa6.67□□□□□ -1.34
KRT4-201ENST00000548097 TNP1P09430 55 aa6.67□□□□□ -1.34
KRT4-201ENST00000548097 KRTAP9-7A8MTY7 169 aa6.64□□□□□ -1.35
KRT4-201ENST00000548097 KRTAP8-1Q8IUC2 63 aa6.62□□□□□ -1.35
KRT4-201ENST00000548097 KRTAP6-3Q3LI67 103 aa6.56□□□□□ -1.36
KRT4-201ENST00000548097 LCE3AQ5TA76 89 aa6.54□□□□□ -1.36
KRT4-201ENST00000548097 SPRR2FQ96RM1 72 aa6.5□□□□□ -1.37
KRT4-201ENST00000548097 KRTAP5-9P26371 169 aa6.49□□□□□ -1.37
KRT4-201ENST00000548097 MUC12Q9UKN1 5478 aa6.48□□□□□ -1.37
KRT4-201ENST00000548097 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.37
KRT4-201ENST00000548097 KRTAP19-5Q3LI72 72 aa6.41□□□□□ -1.38
KRT4-201ENST00000548097 KRTAP19-7Q3SYF9 63 aa6.41□□□□□ -1.38
KRT4-201ENST00000548097 MDN1Q9NU22 5596 aa6.38□□□□□ -1.39
KRT4-201ENST00000548097 MT1EP04732 61 aa6.31□□□□□ -1.4
KRT4-201ENST00000548097 NDUFAF8A1L188 74 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms