RNA–Protein interactions for RNA: ENST00000547706.1

RPAP3-204, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 2

Gene RPAP3, Length 420 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-204ENST00000547706 MT1FP04733 61 aa6.68□□□□□ -1.34
RPAP3-204ENST00000547706 SERP2Q8N6R1 65 aa6.64□□□□□ -1.35
RPAP3-204ENST00000547706 NDUFC1O43677 76 aa6.63□□□□□ -1.35
RPAP3-204ENST00000547706 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
RPAP3-204ENST00000547706 DMAC1Q96GE9 116 aa6.61□□□□□ -1.35
RPAP3-204ENST00000547706 LOC100996750A0A140TA64 210 aa6.59□□□□□ -1.35
RPAP3-204ENST00000547706 KRTAP4-6Q9BYQ5 205 aa6.59□□□□□ -1.35
RPAP3-204ENST00000547706 KRTAP9-6A0A140TA67 174 aa6.53□□□□□ -1.36
RPAP3-204ENST00000547706 ACYP2P14621 99 aa6.53□□□□□ -1.36
RPAP3-204ENST00000547706 C20orf197Q8N268 126 aa6.53□□□□□ -1.36
RPAP3-204ENST00000547706 CRCT1Q9UGL9 99 aa6.53□□□□□ -1.36
RPAP3-204ENST00000547706 SNURFQ9Y675 71 aa6.53□□□□□ -1.36
RPAP3-204ENST00000547706 H0YAA0 97 aa6.52□□□□□ -1.37
RPAP3-204ENST00000547706 SPANXA2-OT1Q8N9U9 137 aa6.52□□□□□ -1.37
RPAP3-204ENST00000547706 COX7CP15954 63 aa6.51□□□□□ -1.37
RPAP3-204ENST00000547706 CRIPTQ9P021 101 aa6.46□□□□□ -1.38
RPAP3-204ENST00000547706 SPTSSBQ8NFR3 76 aa6.44□□□□□ -1.38
RPAP3-204ENST00000547706 ANAPC13Q9BS18 74 aa6.4□□□□□ -1.38
RPAP3-204ENST00000547706 SPRR2GQ9BYE4 73 aa6.4□□□□□ -1.38
RPAP3-204ENST00000547706 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
RPAP3-204ENST00000547706 CHKB-CPT1BH3BT56 60 aa6.37□□□□□ -1.39
RPAP3-204ENST00000547706 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
RPAP3-204ENST00000547706 FSIP2Q5CZC0 6907 aa6.33□□□□□ -1.4
RPAP3-204ENST00000547706 H7BZZ5 65 aa6.33□□□□□ -1.4
RPAP3-204ENST00000547706 KRTAP19-8Q3LI54 63 aa6.31□□□□□ -1.4
RPAP3-204ENST00000547706 USH2AO75445 5202 aa6.29□□□□□ -1.4
RPAP3-204ENST00000547706 KRTAP19-6Q3LI70 58 aa6.29□□□□□ -1.4
RPAP3-204ENST00000547706 Q5VV11 94 aa6.28□□□□□ -1.4
RPAP3-204ENST00000547706 COA5Q86WW8 74 aa6.25□□□□□ -1.41
RPAP3-204ENST00000547706 CYSTM1Q9H1C7 97 aa6.25□□□□□ -1.41
RPAP3-204ENST00000547706 P0C880 135 aa6.24□□□□□ -1.41
RPAP3-204ENST00000547706 R4GN34 69 aa6.23□□□□□ -1.41
RPAP3-204ENST00000547706 MT1BP07438 61 aa6.22□□□□□ -1.41
RPAP3-204ENST00000547706 CCDC179H3BU77 68 aa6.21□□□□□ -1.42
RPAP3-204ENST00000547706 SSPOA2VEC9 5147 aa6.19□□□□□ -1.42
RPAP3-204ENST00000547706 ATP5EP56381 51 aaPredicted RBP6.19□□□□□ -1.42
RPAP3-204ENST00000547706 M0QZ58 72 aa6.15□□□□□ -1.42
RPAP3-204ENST00000547706 SEC61GP60059 68 aa6.11□□□□□ -1.43
RPAP3-204ENST00000547706 TMEM258P61165 79 aa6.09□□□□□ -1.43
RPAP3-204ENST00000547706 A6NN06 94 aa6.08□□□□□ -1.44
RPAP3-204ENST00000547706 PLAC4Q8WY50 150 aa6.08□□□□□ -1.44
RPAP3-204ENST00000547706 SERP1Q9Y6X1 66 aa6.08□□□□□ -1.44
RPAP3-204ENST00000547706 FCGBPQ9Y6R7 5405 aaPredicted RBP6.07□□□□□ -1.44
RPAP3-204ENST00000547706 KRTAP10-5P60370 271 aa6.06□□□□□ -1.44
RPAP3-204ENST00000547706 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
RPAP3-204ENST00000547706 H3BS24 57 aa6.04□□□□□ -1.44
RPAP3-204ENST00000547706 LINC01554Q52M75 96 aa6.01□□□□□ -1.45
RPAP3-204ENST00000547706 PRO2289Q9P1D8 64 aa6□□□□□ -1.45
RPAP3-204ENST00000547706 A0A1B0GU69 56 aa5.95□□□□□ -1.46
RPAP3-204ENST00000547706 A0A1B0GU33 70 aa5.93□□□□□ -1.46
RPAP3-204ENST00000547706 KRTAP13-4Q3LI77 160 aa5.92□□□□□ -1.46
RPAP3-204ENST00000547706 KRTAP4-8Q9BYQ9 185 aa5.92□□□□□ -1.46
RPAP3-204ENST00000547706 PRR15LQ9BU68 103 aa5.91□□□□□ -1.46
RPAP3-204ENST00000547706 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
RPAP3-204ENST00000547706 MT1XP80297 61 aa5.9□□□□□ -1.46
RPAP3-204ENST00000547706 LINC01558Q9Y6Z2 57 aa5.88□□□□□ -1.47
RPAP3-204ENST00000547706 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
RPAP3-204ENST00000547706 SMIM26A0A096LP01 95 aa5.81□□□□□ -1.48
RPAP3-204ENST00000547706 SPATA8Q6RVD6 105 aa5.81□□□□□ -1.48
RPAP3-204ENST00000547706 KRTAP6-3Q3LI67 103 aa5.8□□□□□ -1.48
RPAP3-204ENST00000547706 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
RPAP3-204ENST00000547706 PCP4P48539 62 aa5.77□□□□□ -1.49
RPAP3-204ENST00000547706 A0A0D9SG42 100 aa5.76□□□□□ -1.49
RPAP3-204ENST00000547706 V9GYY9 64 aa5.76□□□□□ -1.49
RPAP3-204ENST00000547706 CAMK2N1Q7Z7J9 78 aa5.75□□□□□ -1.49
RPAP3-204ENST00000547706 UQCR11O14957 56 aa5.7□□□□□ -1.5
RPAP3-204ENST00000547706 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
RPAP3-204ENST00000547706 SPINT4Q6UDR6 99 aa5.7□□□□□ -1.5
RPAP3-204ENST00000547706 Q1T7F1 81 aa5.68□□□□□ -1.5
RPAP3-204ENST00000547706 RPS28P62857 69 aaKnown RBP5.66□□□□□ -1.5
RPAP3-204ENST00000547706 KRTAP5-9P26371 169 aa5.65□□□□□ -1.5
RPAP3-204ENST00000547706 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
RPAP3-204ENST00000547706 SYNE2Q8WXH0 6885 aaKnown RBP5.63□□□□□ -1.51
RPAP3-204ENST00000547706 A8MU10 97 aa5.63□□□□□ -1.51
RPAP3-204ENST00000547706 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
RPAP3-204ENST00000547706 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
RPAP3-204ENST00000547706 KRTAP8-1Q8IUC2 63 aa5.58□□□□□ -1.52
RPAP3-204ENST00000547706 MIR22HGQ0VDD5 57 aa5.56□□□□□ -1.52
RPAP3-204ENST00000547706 PSPHP1O15172 72 aa5.55□□□□□ -1.52
RPAP3-204ENST00000547706 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
RPAP3-204ENST00000547706 KRTAP9-9Q9BYP9 154 aa5.53□□□□□ -1.52
RPAP3-204ENST00000547706 KRTAP9-4Q9BYQ2 154 aa5.53□□□□□ -1.52
RPAP3-204ENST00000547706 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
RPAP3-204ENST00000547706 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
RPAP3-204ENST00000547706 K7ERS5 55 aa5.47□□□□□ -1.53
RPAP3-204ENST00000547706 KMT2DO14686 5537 aa5.47□□□□□ -1.53
RPAP3-204ENST00000547706 A6NED7 52 aa5.42□□□□□ -1.54
RPAP3-204ENST00000547706 TNP1P09430 55 aa5.42□□□□□ -1.54
RPAP3-204ENST00000547706 C10orf95Q9H7T3 257 aa5.41□□□□□ -1.54
RPAP3-204ENST00000547706 MUC12Q9UKN1 5478 aa5.38□□□□□ -1.55
RPAP3-204ENST00000547706 SPRR2EP22531 72 aa5.35□□□□□ -1.55
RPAP3-204ENST00000547706 SPRR2BP35325 72 aa5.35□□□□□ -1.55
RPAP3-204ENST00000547706 SPRR2AP35326 72 aa5.35□□□□□ -1.55
RPAP3-204ENST00000547706 LCE1AQ5T7P2 110 aa5.33□□□□□ -1.56
RPAP3-204ENST00000547706 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
RPAP3-204ENST00000547706 NEBP20929 6669 aa5.3□□□□□ -1.56
RPAP3-204ENST00000547706 KRTAP19-7Q3SYF9 63 aa5.27□□□□□ -1.57
RPAP3-204ENST00000547706 CDC42SE1Q9NRR8 79 aa5.27□□□□□ -1.57
RPAP3-204ENST00000547706 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
RPAP3-204ENST00000547706 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms