RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 A0A1B0GU69 56 aa9.36□□□□□ -0.91
BRF1-208ENST00000546997 LINC00304Q8N9R0 145 aa9.34□□□□□ -0.91
BRF1-208ENST00000546997 PCLOQ9Y6V0 5065 aa9.32□□□□□ -0.92
BRF1-208ENST00000546997 KRTAP10-8P60410 259 aa9.32□□□□□ -0.92
BRF1-208ENST00000546997 DMBT1Q9UGM3 2413 aaPredicted RBP9.31□□□□□ -0.92
BRF1-208ENST00000546997 UQCR11O14957 56 aa9.3□□□□□ -0.92
BRF1-208ENST00000546997 LINC01554Q52M75 96 aa9.3□□□□□ -0.92
BRF1-208ENST00000546997 MT1HL1P0DM35 61 aa9.28□□□□□ -0.92
BRF1-208ENST00000546997 SPINK1P00995 79 aa9.28□□□□□ -0.92
BRF1-208ENST00000546997 MIR22HGQ0VDD5 57 aa9.27□□□□□ -0.93
BRF1-208ENST00000546997 IGKV2-30P06310 120 aa9.26□□□□□ -0.93
BRF1-208ENST00000546997 PRAC1Q96KF2 57 aa9.26□□□□□ -0.93
BRF1-208ENST00000546997 RPS29P62273 56 aaKnown RBP9.22□□□□□ -0.93
BRF1-208ENST00000546997 RETNLBQ9BQ08 111 aa9.19□□□□□ -0.94
BRF1-208ENST00000546997 ADM2Q7Z4H4 148 aa9.18□□□□□ -0.94
BRF1-208ENST00000546997 KRTAP16-1A8MUX0 517 aa9.09□□□□□ -0.95
BRF1-208ENST00000546997 IGKV2D-30A0A075B6S6 120 aa9.08□□□□□ -0.96
BRF1-208ENST00000546997 HERC1Q15751 4861 aa9.04□□□□□ -0.96
BRF1-208ENST00000546997 CSAG1Q6PB30 78 aa9.02□□□□□ -0.97
BRF1-208ENST00000546997 C9orf92A6NGG3 77 aa8.93□□□□□ -0.98
BRF1-208ENST00000546997 A8MUU9 505 aa8.88□□□□□ -0.99
BRF1-208ENST00000546997 LPAP08519 4548 aa8.88□□□□□ -0.99
BRF1-208ENST00000546997 HMCN2Q8NDA2 5059 aa8.86□□□□□ -0.99
BRF1-208ENST00000546997 KRTAP25-1Q3LHN0 102 aa8.82□□□□□ -1
BRF1-208ENST00000546997 H0YAA0 97 aa8.8□□□□□ -1
BRF1-208ENST00000546997 C20orf166-AS1Q96NR2 134 aa8.8□□□□□ -1
BRF1-208ENST00000546997 LRP2P98164 4655 aa8.8□□□□□ -1
BRF1-208ENST00000546997 TPRXLQ17RH7 258 aa8.78□□□□□ -1
BRF1-208ENST00000546997 XP32Q5T750 250 aa8.76□□□□□ -1.01
BRF1-208ENST00000546997 A0A1B0GU33 70 aa8.75□□□□□ -1.01
BRF1-208ENST00000546997 H1FX-AS1Q4G0G2 97 aa8.72□□□□□ -1.01
BRF1-208ENST00000546997 ROMO1P60602 79 aa8.7□□□□□ -1.02
BRF1-208ENST00000546997 K7ERS5 55 aa8.66□□□□□ -1.02
BRF1-208ENST00000546997 RPL37P61927 97 aaKnown RBP8.66□□□□□ -1.02
BRF1-208ENST00000546997 KRTAP3-1Q9BYR8 98 aa8.58□□□□□ -1.04
BRF1-208ENST00000546997 MUC17Q685J3 4493 aa8.51□□□□□ -1.05
BRF1-208ENST00000546997 UBR4Q5T4S7 5183 aa8.51□□□□□ -1.05
BRF1-208ENST00000546997 COX6B2Q6YFQ2 88 aa8.48□□□□□ -1.05
BRF1-208ENST00000546997 MUC2Q02817 5179 aa8.42□□□□□ -1.06
BRF1-208ENST00000546997 KRTAP4-1Q9BYQ7 146 aa8.38□□□□□ -1.07
BRF1-208ENST00000546997 P0C880 135 aa8.37□□□□□ -1.07
BRF1-208ENST00000546997 RNF213Q63HN8 5207 aa8.35□□□□□ -1.07
BRF1-208ENST00000546997 KRTAP10-6P60371 365 aaPredicted RBP8.29□□□□□ -1.08
BRF1-208ENST00000546997 CRIPTQ9P021 101 aa8.29□□□□□ -1.08
BRF1-208ENST00000546997 SPINT4Q6UDR6 99 aa8.21□□□□□ -1.09
BRF1-208ENST00000546997 KRTAP13-4Q3LI77 160 aa8.18□□□□□ -1.1
BRF1-208ENST00000546997 KRTAP15-1Q3LI76 137 aa8.15□□□□□ -1.11
BRF1-208ENST00000546997 KRTAP19-2Q3LHN2 52 aa8.11□□□□□ -1.11
BRF1-208ENST00000546997 S4R3F8 94 aa8.1□□□□□ -1.11
BRF1-208ENST00000546997 A0A0D9SG42 100 aa8.1□□□□□ -1.11
BRF1-208ENST00000546997 FAT4Q6V0I7 4981 aa8.09□□□□□ -1.11
BRF1-208ENST00000546997 FLGP20930 4061 aaPredicted RBP8.03□□□□□ -1.12
BRF1-208ENST00000546997 C10orf95Q9H7T3 257 aa8.01□□□□□ -1.13
BRF1-208ENST00000546997 NDUFAF8A1L188 74 aa7.98□□□□□ -1.13
BRF1-208ENST00000546997 KRTAP12-2P59991 146 aa7.97□□□□□ -1.13
BRF1-208ENST00000546997 KRTAP12-1P59990 96 aa7.95□□□□□ -1.14
BRF1-208ENST00000546997 M0QZ58 72 aa7.94□□□□□ -1.14
BRF1-208ENST00000546997 MT1HP80294 61 aa7.83□□□□□ -1.16
BRF1-208ENST00000546997 CAMK2N1Q7Z7J9 78 aa7.78□□□□□ -1.16
BRF1-208ENST00000546997 M0R2T5 61 aa7.71□□□□□ -1.17
BRF1-208ENST00000546997 LUZP6Q538Z0 58 aa7.71□□□□□ -1.18
BRF1-208ENST00000546997 KRTAP19-4Q3LI73 84 aa7.59□□□□□ -1.19
BRF1-208ENST00000546997 PLAC4Q8WY50 150 aa7.59□□□□□ -1.2
BRF1-208ENST00000546997 KRTAP9-8Q9BYQ0 159 aa7.52□□□□□ -1.21
BRF1-208ENST00000546997 PP632Q6XCG6 107 aa7.51□□□□□ -1.21
BRF1-208ENST00000546997 R4GN34 69 aa7.51□□□□□ -1.21
BRF1-208ENST00000546997 MT2AP02795 61 aa7.48□□□□□ -1.21
BRF1-208ENST00000546997 MT1FP04733 61 aa7.45□□□□□ -1.22
BRF1-208ENST00000546997 KRTAP10-10P60014 251 aa7.39□□□□□ -1.23
BRF1-208ENST00000546997 KRTAP19-1Q8IUB9 90 aa7.25□□□□□ -1.25
BRF1-208ENST00000546997 KRTAP9-3Q9BYQ3 159 aa7.25□□□□□ -1.25
BRF1-208ENST00000546997 SPRR2GQ9BYE4 73 aa7.23□□□□□ -1.25
BRF1-208ENST00000546997 SPRR5A0A1B0GTR4 108 aa7.11□□□□□ -1.27
BRF1-208ENST00000546997 USH2AO75445 5202 aa7.05□□□□□ -1.28
BRF1-208ENST00000546997 KRTAP19-8Q3LI54 63 aa7.05□□□□□ -1.28
BRF1-208ENST00000546997 TNP1P09430 55 aa7.04□□□□□ -1.28
BRF1-208ENST00000546997 FSIP2Q5CZC0 6907 aa7.02□□□□□ -1.29
BRF1-208ENST00000546997 MT1BP07438 61 aa7.01□□□□□ -1.29
BRF1-208ENST00000546997 KRTAP9-4Q9BYQ2 154 aa6.99□□□□□ -1.29
BRF1-208ENST00000546997 LCE5AQ5TCM9 118 aa6.97□□□□□ -1.29
BRF1-208ENST00000546997 KRTAP9-2Q9BYQ4 174 aa6.96□□□□□ -1.3
BRF1-208ENST00000546997 SSPOA2VEC9 5147 aa6.9□□□□□ -1.3
BRF1-208ENST00000546997 KRTAP9-6A0A140TA67 174 aa6.8□□□□□ -1.32
BRF1-208ENST00000546997 KRTAP9-7A8MTY7 169 aa6.8□□□□□ -1.32
BRF1-208ENST00000546997 KRTAP9-9Q9BYP9 154 aa6.77□□□□□ -1.33
BRF1-208ENST00000546997 MT1XP80297 61 aa6.75□□□□□ -1.33
BRF1-208ENST00000546997 KRTAP10-5P60370 271 aa6.73□□□□□ -1.33
BRF1-208ENST00000546997 PRO2289Q9P1D8 64 aa6.71□□□□□ -1.33
BRF1-208ENST00000546997 KRTAP19-6Q3LI70 58 aa6.68□□□□□ -1.34
BRF1-208ENST00000546997 LCE4AQ5TA78 99 aa6.68□□□□□ -1.34
BRF1-208ENST00000546997 INE1O15225 51 aa6.66□□□□□ -1.34
BRF1-208ENST00000546997 CRCT1Q9UGL9 99 aa6.66□□□□□ -1.34
BRF1-208ENST00000546997 FCGBPQ9Y6R7 5405 aaPredicted RBP6.6□□□□□ -1.35
BRF1-208ENST00000546997 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
BRF1-208ENST00000546997 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
BRF1-208ENST00000546997 KRTAP10-7P60409 375 aaPredicted RBP6.48□□□□□ -1.37
BRF1-208ENST00000546997 KMT2DO14686 5537 aa6.43□□□□□ -1.38
BRF1-208ENST00000546997 MACF1Q9UPN3 7388 aaKnown RBP6.4□□□□□ -1.38
BRF1-208ENST00000546997 KRTAP10-12P60413 245 aa6.37□□□□□ -1.39
BRF1-208ENST00000546997 KRTAP4-8A0A0G2JLE6 195 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms