RNA–Protein interactions for RNA: ENST00000546243.5

THRA-204, Transcript of thyroid hormone receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene THRA, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-204ENST00000546243 MIR22HGQ0VDD5 57 aa13.23□□□□□ -0.29
THRA-204ENST00000546243 COX6B2Q6YFQ2 88 aa13.23□□□□□ -0.29
THRA-204ENST00000546243 KTN1-AS1Q86SY8 53 aa13.22□□□□□ -0.29
THRA-204ENST00000546243 RPL37P61927 97 aaKnown RBP13.2□□□□□ -0.3
THRA-204ENST00000546243 MT1HL1P0DM35 61 aa13.19□□□□□ -0.3
THRA-204ENST00000546243 J3QL48 77 aa13.18□□□□□ -0.3
THRA-204ENST00000546243 DMBT1Q9UGM3 2413 aaPredicted RBP13.18□□□□□ -0.3
THRA-204ENST00000546243 HERC1Q15751 4861 aa13.14□□□□□ -0.31
THRA-204ENST00000546243 XP32Q5T750 250 aa13.11□□□□□ -0.31
THRA-204ENST00000546243 A0A1B0GU33 70 aa12.92□□□□□ -0.34
THRA-204ENST00000546243 H1FX-AS1Q4G0G2 97 aa12.89□□□□□ -0.35
THRA-204ENST00000546243 H0YAA0 97 aa12.85□□□□□ -0.35
THRA-204ENST00000546243 TPRXLQ17RH7 258 aa12.84□□□□□ -0.35
THRA-204ENST00000546243 KRTAP3-3Q9BYR6 98 aa12.78□□□□□ -0.36
THRA-204ENST00000546243 S4R3F8 94 aa12.76□□□□□ -0.37
THRA-204ENST00000546243 RBM12B-AS1Q9P1G2 102 aa12.71□□□□□ -0.37
THRA-204ENST00000546243 HMCN2Q8NDA2 5059 aa12.69□□□□□ -0.38
THRA-204ENST00000546243 LPAP08519 4548 aa12.63□□□□□ -0.39
THRA-204ENST00000546243 KRTAP10-6P60371 365 aaPredicted RBP12.6□□□□□ -0.39
THRA-204ENST00000546243 PRAC1Q96KF2 57 aa12.56□□□□□ -0.4
THRA-204ENST00000546243 ADM2Q7Z4H4 148 aa12.54□□□□□ -0.4
THRA-204ENST00000546243 LRP2P98164 4655 aa12.54□□□□□ -0.4
THRA-204ENST00000546243 KRTAP3-2Q9BYR7 98 aa12.53□□□□□ -0.4
THRA-204ENST00000546243 K7ERS5 55 aa12.5□□□□□ -0.41
THRA-204ENST00000546243 UBR4Q5T4S7 5183 aa12.38□□□□□ -0.43
THRA-204ENST00000546243 CSAG1Q6PB30 78 aa12.37□□□□□ -0.43
THRA-204ENST00000546243 SEC61BP60468 96 aaKnown RBP12.36□□□□□ -0.43
THRA-204ENST00000546243 KRTAP13-4Q3LI77 160 aa12.35□□□□□ -0.43
THRA-204ENST00000546243 P0C880 135 aa12.33□□□□□ -0.44
THRA-204ENST00000546243 A0A0D9SG42 100 aa12.2□□□□□ -0.46
THRA-204ENST00000546243 LINC01554Q52M75 96 aa12.17□□□□□ -0.46
THRA-204ENST00000546243 M0QZ58 72 aa12.13□□□□□ -0.47
THRA-204ENST00000546243 RNF213Q63HN8 5207 aa12.12□□□□□ -0.47
THRA-204ENST00000546243 ROMO1P60602 79 aa12.11□□□□□ -0.47
THRA-204ENST00000546243 KRTAP25-1Q3LHN0 102 aa12.09□□□□□ -0.47
THRA-204ENST00000546243 MUC2Q02817 5179 aa12.01□□□□□ -0.49
THRA-204ENST00000546243 KRTAP4-1Q9BYQ7 146 aa12□□□□□ -0.49
THRA-204ENST00000546243 MUC17Q685J3 4493 aa12□□□□□ -0.49
THRA-204ENST00000546243 KRTAP12-1P59990 96 aa11.95□□□□□ -0.5
THRA-204ENST00000546243 KRTAP12-2P59991 146 aa11.95□□□□□ -0.5
THRA-204ENST00000546243 SPINT4Q6UDR6 99 aa11.86□□□□□ -0.51
THRA-204ENST00000546243 KRTAP19-2Q3LHN2 52 aa11.84□□□□□ -0.51
THRA-204ENST00000546243 R4GN34 69 aa11.8□□□□□ -0.52
THRA-204ENST00000546243 CRIPTQ9P021 101 aa11.78□□□□□ -0.52
THRA-204ENST00000546243 LORP23490 312 aaPredicted RBP11.58□□□□□ -0.55
THRA-204ENST00000546243 FAT4Q6V0I7 4981 aa11.54□□□□□ -0.56
THRA-204ENST00000546243 C10orf95Q9H7T3 257 aa11.48□□□□□ -0.57
THRA-204ENST00000546243 FLGP20930 4061 aaPredicted RBP11.42□□□□□ -0.58
THRA-204ENST00000546243 LCE2CQ5TA81 110 aa11.37□□□□□ -0.59
THRA-204ENST00000546243 LCE2AQ5TA79 106 aaPredicted RBP11.25□□□□□ -0.61
THRA-204ENST00000546243 MT1HP80294 61 aa11.17□□□□□ -0.62
THRA-204ENST00000546243 CAMK2N1Q7Z7J9 78 aa11.16□□□□□ -0.62
THRA-204ENST00000546243 M0R2T5 61 aa10.99□□□□□ -0.65
THRA-204ENST00000546243 PP632Q6XCG6 107 aa10.95□□□□□ -0.66
THRA-204ENST00000546243 SPRR2GQ9BYE4 73 aa10.94□□□□□ -0.66
THRA-204ENST00000546243 KRTAP15-1Q3LI76 137 aa10.93□□□□□ -0.66
THRA-204ENST00000546243 KRTAP19-1Q8IUB9 90 aa10.8□□□□□ -0.68
THRA-204ENST00000546243 PLAC4Q8WY50 150 aa10.77□□□□□ -0.69
THRA-204ENST00000546243 TNP1P09430 55 aa10.76□□□□□ -0.69
THRA-204ENST00000546243 KRTAP23-1A1A580 65 aa10.72□□□□□ -0.69
THRA-204ENST00000546243 MT2AP02795 61 aa10.71□□□□□ -0.69
THRA-204ENST00000546243 MT1FP04733 61 aa10.67□□□□□ -0.7
THRA-204ENST00000546243 KRTAP10-10P60014 251 aa10.66□□□□□ -0.7
THRA-204ENST00000546243 KRTAP9-8Q9BYQ0 159 aa10.66□□□□□ -0.7
THRA-204ENST00000546243 KRTAP9-2Q9BYQ4 174 aa10.56□□□□□ -0.72
THRA-204ENST00000546243 H3BS24 57 aa10.55□□□□□ -0.72
THRA-204ENST00000546243 KRTAP19-8Q3LI54 63 aa10.52□□□□□ -0.73
THRA-204ENST00000546243 NDUFAF8A1L188 74 aa10.45□□□□□ -0.74
THRA-204ENST00000546243 LCE2DQ5TA82 110 aaPredicted RBP10.41□□□□□ -0.74
THRA-204ENST00000546243 FSIP2Q5CZC0 6907 aa10.36□□□□□ -0.75
THRA-204ENST00000546243 MT1BP07438 61 aa10.3□□□□□ -0.76
THRA-204ENST00000546243 KRTAP9-3Q9BYQ3 159 aa10.28□□□□□ -0.76
THRA-204ENST00000546243 LCE2BO14633 110 aa10.19□□□□□ -0.78
THRA-204ENST00000546243 KRTAP10-5P60370 271 aa10.16□□□□□ -0.78
THRA-204ENST00000546243 MT1XP80297 61 aa10.15□□□□□ -0.78
THRA-204ENST00000546243 LCE3AQ5TA76 89 aa10.14□□□□□ -0.79
THRA-204ENST00000546243 USH2AO75445 5202 aa10.12□□□□□ -0.79
THRA-204ENST00000546243 LUZP6Q538Z0 58 aa10.1□□□□□ -0.79
THRA-204ENST00000546243 SPRR5A0A1B0GTR4 108 aa10.03□□□□□ -0.8
THRA-204ENST00000546243 CRCT1Q9UGL9 99 aa10.03□□□□□ -0.8
THRA-204ENST00000546243 KRTAP9-6A0A140TA67 174 aa10□□□□□ -0.81
THRA-204ENST00000546243 KRTAP8-1Q8IUC2 63 aa9.99□□□□□ -0.81
THRA-204ENST00000546243 PRO2289Q9P1D8 64 aa9.96□□□□□ -0.81
THRA-204ENST00000546243 SSPOA2VEC9 5147 aa9.96□□□□□ -0.82
THRA-204ENST00000546243 KRTAP10-12P60413 245 aa9.91□□□□□ -0.82
THRA-204ENST00000546243 KRTAP10-7P60409 375 aaPredicted RBP9.78□□□□□ -0.84
THRA-204ENST00000546243 KRTAP12-3P60328 96 aa9.72□□□□□ -0.85
THRA-204ENST00000546243 FCGBPQ9Y6R7 5405 aaPredicted RBP9.63□□□□□ -0.87
THRA-204ENST00000546243 KRTAP19-6Q3LI70 58 aa9.62□□□□□ -0.87
THRA-204ENST00000546243 A0A0A0MQY5 61 aa9.39□□□□□ -0.91
THRA-204ENST00000546243 KRTAP19-5Q3LI72 72 aa9.36□□□□□ -0.91
THRA-204ENST00000546243 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.33□□□□□ -0.92
THRA-204ENST00000546243 MACF1Q9UPN3 7388 aaKnown RBP9.29□□□□□ -0.92
THRA-204ENST00000546243 KRTAP4-8A0A0G2JLE6 195 aa9.17□□□□□ -0.94
THRA-204ENST00000546243 KRTAP4-8Q9BYQ9 185 aa9.17□□□□□ -0.94
THRA-204ENST00000546243 LCE3CQ5T5A8 94 aa9.15□□□□□ -0.95
THRA-204ENST00000546243 SYNE2Q8WXH0 6885 aaKnown RBP9.14□□□□□ -0.95
THRA-204ENST00000546243 KRTAP9-7A8MTY7 169 aa9.07□□□□□ -0.96
THRA-204ENST00000546243 KRTAP19-7Q3SYF9 63 aa9.04□□□□□ -0.96
THRA-204ENST00000546243 KRTAP19-4Q3LI73 84 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms