RNA–Protein interactions for RNA: ENST00000545802.1

TSPAN11-203, Transcript of tetraspanin 11, humanhuman

TSL 1 (best) BASIC

Gene TSPAN11, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN11-203ENST00000545802 S4R3F8 94 aa13.21□□□□□ -0.3
TSPAN11-203ENST00000545802 FAT4Q6V0I7 4981 aa13.19□□□□□ -0.3
TSPAN11-203ENST00000545802 LCA10Q71F78 164 aa13.14□□□□□ -0.31
TSPAN11-203ENST00000545802 COA5Q86WW8 74 aa13.14□□□□□ -0.31
TSPAN11-203ENST00000545802 CHKB-CPT1BH3BT56 60 aa13.12□□□□□ -0.31
TSPAN11-203ENST00000545802 MT1HP80294 61 aa13.09□□□□□ -0.31
TSPAN11-203ENST00000545802 KRTAP3-3Q9BYR6 98 aa13.06□□□□□ -0.32
TSPAN11-203ENST00000545802 Q1T7F1 81 aa13.01□□□□□ -0.33
TSPAN11-203ENST00000545802 CSAG1Q6PB30 78 aa12.99□□□□□ -0.33
TSPAN11-203ENST00000545802 SPTSSBQ8NFR3 76 aa12.98□□□□□ -0.33
TSPAN11-203ENST00000545802 M0R2T5 61 aa12.97□□□□□ -0.33
TSPAN11-203ENST00000545802 V9GYY9 64 aa12.9□□□□□ -0.34
TSPAN11-203ENST00000545802 LCE2AQ5TA79 106 aaPredicted RBP12.86□□□□□ -0.35
TSPAN11-203ENST00000545802 LINC01558Q9Y6Z2 57 aa12.73□□□□□ -0.37
TSPAN11-203ENST00000545802 PSPHP1O15172 72 aa12.73□□□□□ -0.37
TSPAN11-203ENST00000545802 KRTAP10-6P60371 365 aaPredicted RBP12.67□□□□□ -0.38
TSPAN11-203ENST00000545802 Q5VV11 94 aa12.66□□□□□ -0.38
TSPAN11-203ENST00000545802 PRR15LQ9BU68 103 aa12.66□□□□□ -0.38
TSPAN11-203ENST00000545802 H0YAA0 97 aa12.66□□□□□ -0.38
TSPAN11-203ENST00000545802 LORP23490 312 aaPredicted RBP12.61□□□□□ -0.39
TSPAN11-203ENST00000545802 ADM2Q7Z4H4 148 aa12.56□□□□□ -0.4
TSPAN11-203ENST00000545802 KRTAP9-8Q9BYQ0 159 aa12.56□□□□□ -0.4
TSPAN11-203ENST00000545802 SEC61GP60059 68 aa12.53□□□□□ -0.4
TSPAN11-203ENST00000545802 KRTAP3-2Q9BYR7 98 aa12.5□□□□□ -0.41
TSPAN11-203ENST00000545802 MT2AP02795 61 aa12.48□□□□□ -0.41
TSPAN11-203ENST00000545802 BRK1Q8WUW1 75 aa12.48□□□□□ -0.41
TSPAN11-203ENST00000545802 A0A1B0GU69 56 aa12.46□□□□□ -0.41
TSPAN11-203ENST00000545802 P0C880 135 aa12.42□□□□□ -0.42
TSPAN11-203ENST00000545802 PRO0628Q9UI54 55 aa12.4□□□□□ -0.42
TSPAN11-203ENST00000545802 KRTAP10-10P60014 251 aa12.4□□□□□ -0.42
TSPAN11-203ENST00000545802 MT1FP04733 61 aa12.38□□□□□ -0.43
TSPAN11-203ENST00000545802 A6NED7 52 aa12.33□□□□□ -0.44
TSPAN11-203ENST00000545802 CRIPTQ9P021 101 aa12.27□□□□□ -0.44
TSPAN11-203ENST00000545802 SVIPQ8NHG7 77 aa12.23□□□□□ -0.45
TSPAN11-203ENST00000545802 A0A1B0GU33 70 aa12.22□□□□□ -0.45
TSPAN11-203ENST00000545802 A8MU10 97 aa12.2□□□□□ -0.46
TSPAN11-203ENST00000545802 CDC42SE1Q9NRR8 79 aa12.2□□□□□ -0.46
TSPAN11-203ENST00000545802 R4GN34 69 aa12.17□□□□□ -0.46
TSPAN11-203ENST00000545802 M0QZ58 72 aa12.14□□□□□ -0.47
TSPAN11-203ENST00000545802 KRTAP9-3Q9BYQ3 159 aa12.13□□□□□ -0.47
TSPAN11-203ENST00000545802 UQCR11O14957 56 aa12.07□□□□□ -0.48
TSPAN11-203ENST00000545802 SPRR2GQ9BYE4 73 aa12.07□□□□□ -0.48
TSPAN11-203ENST00000545802 KRTAP19-1Q8IUB9 90 aa12.04□□□□□ -0.48
TSPAN11-203ENST00000545802 KRTAP13-4Q3LI77 160 aa12.02□□□□□ -0.49
TSPAN11-203ENST00000545802 SPATA8Q6RVD6 105 aa12.02□□□□□ -0.49
TSPAN11-203ENST00000545802 MIR22HGQ0VDD5 57 aa11.97□□□□□ -0.49
TSPAN11-203ENST00000545802 LINC01554Q52M75 96 aa11.89□□□□□ -0.51
TSPAN11-203ENST00000545802 LCE2DQ5TA82 110 aaPredicted RBP11.86□□□□□ -0.51
TSPAN11-203ENST00000545802 LCE2BO14633 110 aa11.83□□□□□ -0.52
TSPAN11-203ENST00000545802 KRTAP19-8Q3LI54 63 aa11.8□□□□□ -0.52
TSPAN11-203ENST00000545802 A0A0D9SG42 100 aa11.79□□□□□ -0.52
TSPAN11-203ENST00000545802 PMAIP1Q13794 54 aa11.77□□□□□ -0.53
TSPAN11-203ENST00000545802 A6NN06 94 aa11.75□□□□□ -0.53
TSPAN11-203ENST00000545802 KRTAP9-2Q9BYQ4 174 aa11.75□□□□□ -0.53
TSPAN11-203ENST00000545802 MT1BP07438 61 aa11.64□□□□□ -0.55
TSPAN11-203ENST00000545802 PLAC4Q8WY50 150 aa11.61□□□□□ -0.55
TSPAN11-203ENST00000545802 KRTAP12-1P59990 96 aa11.57□□□□□ -0.56
TSPAN11-203ENST00000545802 USH2AO75445 5202 aa11.56□□□□□ -0.56
TSPAN11-203ENST00000545802 SPINT4Q6UDR6 99 aa11.56□□□□□ -0.56
TSPAN11-203ENST00000545802 KRTAP12-2P59991 146 aa11.51□□□□□ -0.57
TSPAN11-203ENST00000545802 FSIP2Q5CZC0 6907 aa11.48□□□□□ -0.57
TSPAN11-203ENST00000545802 KTN1-AS1Q86SY8 53 aa11.45□□□□□ -0.58
TSPAN11-203ENST00000545802 K7ERS5 55 aa11.42□□□□□ -0.58
TSPAN11-203ENST00000545802 CAMK2N1Q7Z7J9 78 aa11.35□□□□□ -0.59
TSPAN11-203ENST00000545802 KRTAP19-6Q3LI70 58 aa11.23□□□□□ -0.61
TSPAN11-203ENST00000545802 SSPOA2VEC9 5147 aa11.23□□□□□ -0.61
TSPAN11-203ENST00000545802 CRCT1Q9UGL9 99 aa11.21□□□□□ -0.61
TSPAN11-203ENST00000545802 MT1XP80297 61 aa11.19□□□□□ -0.62
TSPAN11-203ENST00000545802 PRO2289Q9P1D8 64 aa11.18□□□□□ -0.62
TSPAN11-203ENST00000545802 KRTAP10-5P60370 271 aa11.16□□□□□ -0.62
TSPAN11-203ENST00000545802 KRTAP9-6A0A140TA67 174 aa11.09□□□□□ -0.63
TSPAN11-203ENST00000545802 PRAC1Q96KF2 57 aa11.05□□□□□ -0.64
TSPAN11-203ENST00000545802 C10orf95Q9H7T3 257 aa10.98□□□□□ -0.65
TSPAN11-203ENST00000545802 ROMO1P60602 79 aa10.96□□□□□ -0.65
TSPAN11-203ENST00000545802 FCGBPQ9Y6R7 5405 aaPredicted RBP10.87□□□□□ -0.67
TSPAN11-203ENST00000545802 TNP1P09430 55 aa10.75□□□□□ -0.69
TSPAN11-203ENST00000545802 KRTAP10-7P60409 375 aaPredicted RBP10.7□□□□□ -0.7
TSPAN11-203ENST00000545802 KRTAP25-1Q3LHN0 102 aa10.7□□□□□ -0.7
TSPAN11-203ENST00000545802 KRTAP10-12P60413 245 aa10.63□□□□□ -0.71
TSPAN11-203ENST00000545802 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.4□□□□□ -0.75
TSPAN11-203ENST00000545802 MACF1Q9UPN3 7388 aaKnown RBP10.39□□□□□ -0.75
TSPAN11-203ENST00000545802 KRTAP4-8A0A0G2JLE6 195 aa10.39□□□□□ -0.75
TSPAN11-203ENST00000545802 KRTAP4-8Q9BYQ9 185 aa10.39□□□□□ -0.75
TSPAN11-203ENST00000545802 KMT2DO14686 5537 aa10.34□□□□□ -0.75
TSPAN11-203ENST00000545802 KRTAP23-1A1A580 65 aa10.33□□□□□ -0.76
TSPAN11-203ENST00000545802 LCE3AQ5TA76 89 aa10.31□□□□□ -0.76
TSPAN11-203ENST00000545802 KRTAP8-1Q8IUC2 63 aa10.23□□□□□ -0.77
TSPAN11-203ENST00000545802 PP632Q6XCG6 107 aa10.22□□□□□ -0.77
TSPAN11-203ENST00000545802 SYNE2Q8WXH0 6885 aaKnown RBP10.22□□□□□ -0.77
TSPAN11-203ENST00000545802 KRTAP9-7A8MTY7 169 aa10.07□□□□□ -0.8
TSPAN11-203ENST00000545802 KRTAP19-5Q3LI72 72 aa10.02□□□□□ -0.81
TSPAN11-203ENST00000545802 KRTAP19-7Q3SYF9 63 aa9.98□□□□□ -0.81
TSPAN11-203ENST00000545802 KRTAP6-3Q3LI67 103 aa9.96□□□□□ -0.81
TSPAN11-203ENST00000545802 KRTAP5-9P26371 169 aa9.96□□□□□ -0.82
TSPAN11-203ENST00000545802 KRTAP12-3P60328 96 aa9.94□□□□□ -0.82
TSPAN11-203ENST00000545802 SPRR2FQ96RM1 72 aa9.93□□□□□ -0.82
TSPAN11-203ENST00000545802 MT1EP04732 61 aa9.84□□□□□ -0.83
TSPAN11-203ENST00000545802 MUC12Q9UKN1 5478 aa9.69□□□□□ -0.86
TSPAN11-203ENST00000545802 KRTAP15-1Q3LI76 137 aa9.66□□□□□ -0.86
TSPAN11-203ENST00000545802 MT1LQ93083 61 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms