RNA–Protein interactions for RNA: ENST00000545638.2

NCKAP1L-202, Transcript of NCK associated protein 1 like, humanhuman

TSL 2 BASIC

Gene NCKAP1L, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-202ENST00000545638 ABCA13Q86UQ4 5058 aa4.55□□□□□ -1.68
NCKAP1L-202ENST00000545638 A0A0D9SG42 100 aa4.54□□□□□ -1.68
NCKAP1L-202ENST00000545638 K7ERS5 55 aa4.53□□□□□ -1.68
NCKAP1L-202ENST00000545638 LRP2P98164 4655 aa4.5□□□□□ -1.69
NCKAP1L-202ENST00000545638 LCA10Q71F78 164 aa4.5□□□□□ -1.69
NCKAP1L-202ENST00000545638 ADM2Q7Z4H4 148 aa4.48□□□□□ -1.69
NCKAP1L-202ENST00000545638 UQCR11O14957 56 aa4.48□□□□□ -1.69
NCKAP1L-202ENST00000545638 R4GN34 69 aa4.47□□□□□ -1.69
NCKAP1L-202ENST00000545638 A0A1B0GU33 70 aa4.46□□□□□ -1.7
NCKAP1L-202ENST00000545638 SPINT4Q6UDR6 99 aa4.46□□□□□ -1.7
NCKAP1L-202ENST00000545638 HERC1Q15751 4861 aa4.43□□□□□ -1.7
NCKAP1L-202ENST00000545638 MIR22HGQ0VDD5 57 aa4.43□□□□□ -1.7
NCKAP1L-202ENST00000545638 M0QZ58 72 aa4.42□□□□□ -1.7
NCKAP1L-202ENST00000545638 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
NCKAP1L-202ENST00000545638 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
NCKAP1L-202ENST00000545638 LPAP08519 4548 aa4.4□□□□□ -1.7
NCKAP1L-202ENST00000545638 Q1T7F1 81 aa4.4□□□□□ -1.71
NCKAP1L-202ENST00000545638 SPATA8Q6RVD6 105 aa4.4□□□□□ -1.71
NCKAP1L-202ENST00000545638 PCLOQ9Y6V0 5065 aa4.38□□□□□ -1.71
NCKAP1L-202ENST00000545638 H3BS24 57 aa4.38□□□□□ -1.71
NCKAP1L-202ENST00000545638 PKHD1L1Q86WI1 4243 aa4.37□□□□□ -1.71
NCKAP1L-202ENST00000545638 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
NCKAP1L-202ENST00000545638 KTN1-AS1Q86SY8 53 aa4.35□□□□□ -1.71
NCKAP1L-202ENST00000545638 Q5VV11 94 aa4.35□□□□□ -1.71
NCKAP1L-202ENST00000545638 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
NCKAP1L-202ENST00000545638 CAMK2N1Q7Z7J9 78 aa4.34□□□□□ -1.71
NCKAP1L-202ENST00000545638 TNXBP22105 4242 aa4.32□□□□□ -1.72
NCKAP1L-202ENST00000545638 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
NCKAP1L-202ENST00000545638 P0C880 135 aa4.31□□□□□ -1.72
NCKAP1L-202ENST00000545638 A8MU10 97 aa4.3□□□□□ -1.72
NCKAP1L-202ENST00000545638 RNF213Q63HN8 5207 aa4.27□□□□□ -1.73
NCKAP1L-202ENST00000545638 CDC42SE1Q9NRR8 79 aa4.26□□□□□ -1.73
NCKAP1L-202ENST00000545638 MUC2Q02817 5179 aa4.24□□□□□ -1.73
NCKAP1L-202ENST00000545638 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
NCKAP1L-202ENST00000545638 PLAC4Q8WY50 150 aa4.22□□□□□ -1.73
NCKAP1L-202ENST00000545638 KRTAP3-3Q9BYR6 98 aa4.2□□□□□ -1.74
NCKAP1L-202ENST00000545638 A6NN06 94 aa4.17□□□□□ -1.74
NCKAP1L-202ENST00000545638 HMCN2Q8NDA2 5059 aa4.14□□□□□ -1.75
NCKAP1L-202ENST00000545638 CRIPTQ9P021 101 aa4.14□□□□□ -1.75
NCKAP1L-202ENST00000545638 H0YAA0 97 aa4.14□□□□□ -1.75
NCKAP1L-202ENST00000545638 MT1HP80294 61 aa4.12□□□□□ -1.75
NCKAP1L-202ENST00000545638 KRTAP10-6P60371 365 aaPredicted RBP4.1□□□□□ -1.75
NCKAP1L-202ENST00000545638 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
NCKAP1L-202ENST00000545638 KRTAP13-4Q3LI77 160 aa4.07□□□□□ -1.76
NCKAP1L-202ENST00000545638 LORP23490 312 aaPredicted RBP4.06□□□□□ -1.76
NCKAP1L-202ENST00000545638 KRTAP3-2Q9BYR7 98 aa4.06□□□□□ -1.76
NCKAP1L-202ENST00000545638 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
NCKAP1L-202ENST00000545638 ROMO1P60602 79 aa4.01□□□□□ -1.77
NCKAP1L-202ENST00000545638 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
NCKAP1L-202ENST00000545638 LCE2CQ5TA81 110 aa4□□□□□ -1.77
NCKAP1L-202ENST00000545638 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
NCKAP1L-202ENST00000545638 MT2AP02795 61 aa3.97□□□□□ -1.77
NCKAP1L-202ENST00000545638 KRTAP19-2Q3LHN2 52 aa3.96□□□□□ -1.78
NCKAP1L-202ENST00000545638 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
NCKAP1L-202ENST00000545638 MT1FP04733 61 aa3.95□□□□□ -1.78
NCKAP1L-202ENST00000545638 TNP1P09430 55 aa3.93□□□□□ -1.78
NCKAP1L-202ENST00000545638 PRO2289Q9P1D8 64 aa3.91□□□□□ -1.78
NCKAP1L-202ENST00000545638 C10orf95Q9H7T3 257 aa3.87□□□□□ -1.79
NCKAP1L-202ENST00000545638 LCE2DQ5TA82 110 aaPredicted RBP3.87□□□□□ -1.79
NCKAP1L-202ENST00000545638 MUC17Q685J3 4493 aa3.87□□□□□ -1.79
NCKAP1L-202ENST00000545638 FLGP20930 4061 aaPredicted RBP3.86□□□□□ -1.79
NCKAP1L-202ENST00000545638 KRTAP9-8Q9BYQ0 159 aa3.85□□□□□ -1.79
NCKAP1L-202ENST00000545638 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
NCKAP1L-202ENST00000545638 KRTAP19-1Q8IUB9 90 aa3.78□□□□□ -1.8
NCKAP1L-202ENST00000545638 LCE2AQ5TA79 106 aaPredicted RBP3.76□□□□□ -1.81
NCKAP1L-202ENST00000545638 KRTAP25-1Q3LHN0 102 aa3.75□□□□□ -1.81
NCKAP1L-202ENST00000545638 KRTAP9-3Q9BYQ3 159 aa3.71□□□□□ -1.82
NCKAP1L-202ENST00000545638 LCE2BO14633 110 aa3.66□□□□□ -1.82
NCKAP1L-202ENST00000545638 USH2AO75445 5202 aa3.64□□□□□ -1.83
NCKAP1L-202ENST00000545638 PP632Q6XCG6 107 aa3.64□□□□□ -1.83
NCKAP1L-202ENST00000545638 MT1BP07438 61 aa3.64□□□□□ -1.83
NCKAP1L-202ENST00000545638 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
NCKAP1L-202ENST00000545638 KRTAP19-8Q3LI54 63 aa3.63□□□□□ -1.83
NCKAP1L-202ENST00000545638 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
NCKAP1L-202ENST00000545638 KRTAP9-2Q9BYQ4 174 aa3.59□□□□□ -1.84
NCKAP1L-202ENST00000545638 LUZP6Q538Z0 58 aa3.58□□□□□ -1.84
NCKAP1L-202ENST00000545638 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
NCKAP1L-202ENST00000545638 MT1XP80297 61 aa3.53□□□□□ -1.84
NCKAP1L-202ENST00000545638 KRTAP8-1Q8IUC2 63 aa3.52□□□□□ -1.85
NCKAP1L-202ENST00000545638 KRTAP10-5P60370 271 aa3.51□□□□□ -1.85
NCKAP1L-202ENST00000545638 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
NCKAP1L-202ENST00000545638 CRCT1Q9UGL9 99 aa3.5□□□□□ -1.85
NCKAP1L-202ENST00000545638 KRTAP12-3P60328 96 aa3.46□□□□□ -1.85
NCKAP1L-202ENST00000545638 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
NCKAP1L-202ENST00000545638 KRTAP4-8A0A0G2JLE6 195 aa3.45□□□□□ -1.86
NCKAP1L-202ENST00000545638 KRTAP4-8Q9BYQ9 185 aa3.45□□□□□ -1.86
NCKAP1L-202ENST00000545638 SPRR2FQ96RM1 72 aa3.42□□□□□ -1.86
NCKAP1L-202ENST00000545638 KRTAP19-6Q3LI70 58 aa3.38□□□□□ -1.87
NCKAP1L-202ENST00000545638 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
NCKAP1L-202ENST00000545638 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
NCKAP1L-202ENST00000545638 KMT2DO14686 5537 aa3.35□□□□□ -1.87
NCKAP1L-202ENST00000545638 KRTAP9-6A0A140TA67 174 aa3.33□□□□□ -1.88
NCKAP1L-202ENST00000545638 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
NCKAP1L-202ENST00000545638 FCGBPQ9Y6R7 5405 aaPredicted RBP3.3□□□□□ -1.88
NCKAP1L-202ENST00000545638 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
NCKAP1L-202ENST00000545638 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
NCKAP1L-202ENST00000545638 DSTQ03001 7570 aaKnown RBP3.24□□□□□ -1.89
NCKAP1L-202ENST00000545638 SPRR2EP22531 72 aa3.22□□□□□ -1.89
NCKAP1L-202ENST00000545638 SPRR2BP35325 72 aa3.22□□□□□ -1.89
NCKAP1L-202ENST00000545638 SPRR2AP35326 72 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms